RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 RALYLQ86SE5 291 aaKnown RBP20.7■□□□□ 0.91
PHGDH-230ENST00000641927 PNMA8AQ86V59 439 aaPredicted RBP20.7■□□□□ 0.91
PHGDH-230ENST00000641927 DCPSQ96C86 337 aaKnown RBP20.7■□□□□ 0.91
PHGDH-230ENST00000641927 NEK1Q96PY6 1258 aa20.7■□□□□ 0.91
PHGDH-230ENST00000641927 VEGFAP15692 232 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-230ENST00000641927 CRACR2BQ8N4Y2 399 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-230ENST00000641927 STAG1Q8WVM7 1258 aa20.7■□□□□ 0.9
PHGDH-230ENST00000641927 TRIM34Q9BYJ4 488 aa20.7■□□□□ 0.9
PHGDH-230ENST00000641927 DEFB129Q9H1M3 183 aa20.7■□□□□ 0.9
PHGDH-230ENST00000641927 PI4KBQ9UBF8 816 aa20.7■□□□□ 0.9
PHGDH-230ENST00000641927 PRDM1O75626 825 aa20.69■□□□□ 0.9
PHGDH-230ENST00000641927 NCOA7Q8NI08 942 aa20.69■□□□□ 0.9
PHGDH-230ENST00000641927 UPF3BQ9BZI7 483 aaKnown RBP20.69■□□□□ 0.9
PHGDH-230ENST00000641927 MKNK2Q9HBH9 465 aa20.69■□□□□ 0.9
PHGDH-230ENST00000641927 SERPINB13Q9UIV8 391 aa20.69■□□□□ 0.9
PHGDH-230ENST00000641927 NEDD4P46934 1319 aa20.68■□□□□ 0.9
PHGDH-230ENST00000641927 SLC44A5Q8NCS7 719 aa20.68■□□□□ 0.9
PHGDH-230ENST00000641927 CNNM2Q9H8M5 875 aa20.68■□□□□ 0.9
PHGDH-230ENST00000641927 CLEC11AQ9Y240 323 aa20.68■□□□□ 0.9
PHGDH-230ENST00000641927 ATRNL1Q5VV63 1379 aa20.68■□□□□ 0.9
PHGDH-230ENST00000641927 PITPNM2Q9BZ72 1349 aa20.68■□□□□ 0.9
PHGDH-230ENST00000641927 CPA1P15085 419 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 RABEP1Q15276 862 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 BLOC1S2Q6QNY1 142 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 SULF1Q8IWU6 871 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 KRT23Q9C075 422 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 ZNF287Q9HBT7 754 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 NMRK2Q9NPI5 230 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 CYP46A1Q9Y6A2 500 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 TACC3Q9Y6A5 838 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 ROBO3Q96MS0 1386 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 COL2A1P02458 1487 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-230ENST00000641927 B4E1Z4 1266 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 PCP11498 1178 aaKnown RBP20.67■□□□□ 0.9
PHGDH-230ENST00000641927 C16orf86Q6ZW13 317 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 CDAN1Q8IWY9 1227 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 ZC3H15Q8WU90 426 aaKnown RBP20.67■□□□□ 0.9
PHGDH-230ENST00000641927 TM6SF1Q9BZW5 370 aa20.67■□□□□ 0.9
PHGDH-230ENST00000641927 FAM196BA6NMK8 535 aa20.66■□□□□ 0.9
PHGDH-230ENST00000641927 RANBP6O60518 1105 aaKnown RBP20.66■□□□□ 0.9
PHGDH-230ENST00000641927 HMGB1P09429 215 aaKnown RBP20.66■□□□□ 0.9
PHGDH-230ENST00000641927 CDK8P49336 464 aa20.66■□□□□ 0.9
PHGDH-230ENST00000641927 NEK4P51957 841 aa20.66■□□□□ 0.9
PHGDH-230ENST00000641927 FOXP4Q8IVH2 680 aaPredicted RBP20.66■□□□□ 0.9
PHGDH-230ENST00000641927 IL17RAQ96F46 866 aa20.66■□□□□ 0.9
PHGDH-230ENST00000641927 EHD4Q9H223 541 aa20.66■□□□□ 0.9
PHGDH-230ENST00000641927 ZSWIM6Q9HCJ5 1215 aa20.66■□□□□ 0.9
PHGDH-230ENST00000641927 RBM19Q9Y4C8 960 aaKnown RBP20.66■□□□□ 0.9
PHGDH-230ENST00000641927 KDM4AO75164 1064 aa20.65■□□□□ 0.9
PHGDH-230ENST00000641927 SLURP2P0DP57 97 aa20.65■□□□□ 0.9
PHGDH-230ENST00000641927 PRAMEF18Q5VWM3 479 aa20.65■□□□□ 0.9
PHGDH-230ENST00000641927 RUFY3Q7L099 469 aa20.65■□□□□ 0.9
PHGDH-230ENST00000641927 KRT26Q7Z3Y9 468 aa20.65■□□□□ 0.9
PHGDH-230ENST00000641927 ESR2Q92731 530 aa20.65■□□□□ 0.9
PHGDH-230ENST00000641927 SWAP70Q9UH65 585 aa20.65■□□□□ 0.9
PHGDH-230ENST00000641927 COL9A3Q14050 684 aaPredicted RBP20.64■□□□□ 0.9
PHGDH-230ENST00000641927 CHST3Q7LGC8 479 aa20.64■□□□□ 0.9
PHGDH-230ENST00000641927 ZNF444Q8N0Y2 327 aaPredicted RBP20.64■□□□□ 0.9
PHGDH-230ENST00000641927 TCEANC2Q96MN5 208 aa20.64■□□□□ 0.9
PHGDH-230ENST00000641927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.64■□□□□ 0.9
PHGDH-230ENST00000641927 PPP2R3BQ9Y5P8 575 aa20.64■□□□□ 0.9
PHGDH-230ENST00000641927 ADM5C9JUS6 153 aa20.64■□□□□ 0.89
PHGDH-230ENST00000641927 ORC4O43929 436 aa20.64■□□□□ 0.89
PHGDH-230ENST00000641927 FGRP09769 529 aa20.64■□□□□ 0.89
PHGDH-230ENST00000641927 POTEIP0CG38 1075 aa20.64■□□□□ 0.89
PHGDH-230ENST00000641927 POTEJP0CG39 1038 aa20.64■□□□□ 0.89
PHGDH-230ENST00000641927 RPS6KB1P23443 525 aa20.64■□□□□ 0.89
PHGDH-230ENST00000641927 GABPAQ06546 454 aa20.64■□□□□ 0.89
PHGDH-230ENST00000641927 MIGA2Q7L4E1 593 aa20.64■□□□□ 0.89
PHGDH-230ENST00000641927 DHX32Q7L7V1 743 aaKnown RBP20.64■□□□□ 0.89
PHGDH-230ENST00000641927 MB21D2Q8IYB1 491 aaPredicted RBP20.64■□□□□ 0.89
PHGDH-230ENST00000641927 TEPSINQ96N21 525 aa20.64■□□□□ 0.89
PHGDH-230ENST00000641927 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.64■□□□□ 0.892e-7■■■■□ 19.6
PHGDH-230ENST00000641927 TSPY2A6NKD2 308 aa20.63■□□□□ 0.89
PHGDH-230ENST00000641927 MCM5P33992 734 aa20.63■□□□□ 0.89
PHGDH-230ENST00000641927 FAM47AQ5JRC9 791 aa20.63■□□□□ 0.89
PHGDH-230ENST00000641927 NKX2-3Q8TAU0 364 aa20.63■□□□□ 0.89
PHGDH-230ENST00000641927 PDRG1Q9NUG6 133 aa20.63■□□□□ 0.89
PHGDH-230ENST00000641927 PGAP2Q9UHJ9 254 aa20.63■□□□□ 0.89
PHGDH-230ENST00000641927 HERC5Q9UII4 1024 aaKnown RBP20.63■□□□□ 0.89
PHGDH-230ENST00000641927 PRC1O43663 620 aa20.62■□□□□ 0.89
PHGDH-230ENST00000641927 FGD1P98174 961 aa20.62■□□□□ 0.89
PHGDH-230ENST00000641927 NBPF12Q5TAG4 269 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-230ENST00000641927 USP48Q86UV5 1035 aa20.62■□□□□ 0.89
PHGDH-230ENST00000641927 DNAJC18Q9H819 358 aa20.62■□□□□ 0.89
PHGDH-230ENST00000641927 ZSWIM5Q9P217 1185 aa20.62■□□□□ 0.89
PHGDH-230ENST00000641927 POLR2AP24928 1970 aaKnown RBP20.62■□□□□ 0.89
PHGDH-230ENST00000641927 SIPA1L1O43166 1804 aa20.62■□□□□ 0.89
PHGDH-230ENST00000641927 ST18O60284 1047 aa20.61■□□□□ 0.89
PHGDH-230ENST00000641927 TSPY3P0CV98 308 aa20.61■□□□□ 0.89
PHGDH-230ENST00000641927 TSPY8P0CW00 308 aa20.61■□□□□ 0.89
PHGDH-230ENST00000641927 RASA1P20936 1047 aa20.61■□□□□ 0.89
PHGDH-230ENST00000641927 SHMT1P34896 483 aa20.61■□□□□ 0.89
PHGDH-230ENST00000641927 CYB5R4Q7L1T6 521 aa20.61■□□□□ 0.89
PHGDH-230ENST00000641927 LRRC2Q9BYS8 371 aa20.61■□□□□ 0.89
PHGDH-230ENST00000641927 ANP32AP39687 249 aaKnown RBP20.61■□□□□ 0.89
PHGDH-230ENST00000641927 TFAP4Q01664 338 aa20.61■□□□□ 0.89
PHGDH-230ENST00000641927 DLK2Q6UY11 383 aa20.61■□□□□ 0.89
PHGDH-230ENST00000641927 HOOK2Q96ED9 719 aa20.61■□□□□ 0.89
PHGDH-230ENST00000641927 ZKSCAN3Q9BRR0 538 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms