RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 AK9Q5TCS8 1911 aa18.64■□□□□ 0.58
SRRM4-204ENST00000641899 USP17L5A8MUK1 530 aa18.64■□□□□ 0.57
SRRM4-204ENST00000641899 MAGEA10P43363 369 aaPredicted RBP18.64■□□□□ 0.57
SRRM4-204ENST00000641899 MVPQ14764 893 aaKnown RBP18.64■□□□□ 0.57
SRRM4-204ENST00000641899 NUDT12Q9BQG2 462 aa18.64■□□□□ 0.57
SRRM4-204ENST00000641899 NOL10Q9BSC4 688 aaKnown RBP18.64■□□□□ 0.57
SRRM4-204ENST00000641899 TMOD4Q9NZQ9 345 aa18.64■□□□□ 0.57
SRRM4-204ENST00000641899 OGDHLQ9ULD0 1010 aa18.64■□□□□ 0.57
SRRM4-204ENST00000641899 RFX7Q2KHR2 1363 aa18.64■□□□□ 0.57
SRRM4-204ENST00000641899 GPR75-ASB3A0A0A6YYF3 556 aa18.63■□□□□ 0.57
SRRM4-204ENST00000641899 XRCC5P13010 732 aaKnown RBP18.63■□□□□ 0.57
SRRM4-204ENST00000641899 HMGCS2P54868 508 aa18.63■□□□□ 0.57
SRRM4-204ENST00000641899 ASCC2Q9H1I8 757 aaPredicted RBP18.63■□□□□ 0.57
SRRM4-204ENST00000641899 HERC5Q9UII4 1024 aaKnown RBP18.63■□□□□ 0.57
SRRM4-204ENST00000641899 SYN1P17600 705 aa18.62■□□□□ 0.57
SRRM4-204ENST00000641899 GTF3C2Q8WUA4 911 aaPredicted RBP18.62■□□□□ 0.57
SRRM4-204ENST00000641899 DDX4Q9NQI0 724 aaKnown RBP18.62■□□□□ 0.57
SRRM4-204ENST00000641899 MTMR10Q9NXD2 777 aa18.62■□□□□ 0.57
SRRM4-204ENST00000641899 MORF4L1Q9UBU8 362 aa18.62■□□□□ 0.57
SRRM4-204ENST00000641899 GJD2Q9UKL4 321 aa18.62■□□□□ 0.57
SRRM4-204ENST00000641899 E9PSI1 815 aa18.61■□□□□ 0.57
SRRM4-204ENST00000641899 PRKAR2AP13861 404 aaKnown RBP18.61■□□□□ 0.57
SRRM4-204ENST00000641899 ZKSCAN1P17029 563 aaPredicted RBP18.61■□□□□ 0.57
SRRM4-204ENST00000641899 MAPK4P31152 587 aa18.61■□□□□ 0.57
SRRM4-204ENST00000641899 CAP2P40123 477 aa18.61■□□□□ 0.57
SRRM4-204ENST00000641899 RASGRF1Q13972 1273 aa18.61■□□□□ 0.57
SRRM4-204ENST00000641899 SH3D19Q5HYK7 790 aa18.61■□□□□ 0.57
SRRM4-204ENST00000641899 FAM9BQ8IZU0 186 aa18.61■□□□□ 0.57
SRRM4-204ENST00000641899 GPRC5AQ8NFJ5 357 aa18.61■□□□□ 0.57
SRRM4-204ENST00000641899 TRIM34Q9BYJ4 488 aa18.61■□□□□ 0.57
SRRM4-204ENST00000641899 CWC22Q9HCG8 908 aaKnown RBP18.61■□□□□ 0.57
SRRM4-204ENST00000641899 MGAMO43451 1857 aa18.6■□□□□ 0.57
SRRM4-204ENST00000641899 CYP2B6P20813 491 aa18.6■□□□□ 0.57
SRRM4-204ENST00000641899 MECOMQ03112 1051 aa18.6■□□□□ 0.57
SRRM4-204ENST00000641899 ALDH1L2Q3SY69 923 aa18.6■□□□□ 0.57
SRRM4-204ENST00000641899 GORABQ5T7V8 394 aa18.6■□□□□ 0.57
SRRM4-204ENST00000641899 CCDC84Q86UT8 332 aaPredicted RBP18.6■□□□□ 0.57
SRRM4-204ENST00000641899 SSH1Q8WYL5 1049 aa18.6■□□□□ 0.57
SRRM4-204ENST00000641899 LBHD1Q9BQE6 289 aaPredicted RBP18.6■□□□□ 0.57
SRRM4-204ENST00000641899 DHX36Q9H2U1 1008 aaKnown RBP18.6■□□□□ 0.57
SRRM4-204ENST00000641899 LAMA3Q16787 3333 aa18.59■□□□□ 0.57
SRRM4-204ENST00000641899 C19orf81C9J6K1 198 aa18.59■□□□□ 0.57
SRRM4-204ENST00000641899 ASNSP08243 561 aa18.59■□□□□ 0.57
SRRM4-204ENST00000641899 Q7L0L9 218 aa18.59■□□□□ 0.57
SRRM4-204ENST00000641899 TRIB2Q92519 343 aa18.59■□□□□ 0.57
SRRM4-204ENST00000641899 COPRSQ9NQ92 184 aa18.59■□□□□ 0.57
SRRM4-204ENST00000641899 GINM1Q9NU53 330 aa18.59■□□□□ 0.57
SRRM4-204ENST00000641899 PI4KBQ9UBF8 816 aa18.59■□□□□ 0.57
SRRM4-204ENST00000641899 COL2A1P02458 1487 aaPredicted RBP18.58■□□□□ 0.57
SRRM4-204ENST00000641899 DOCK2Q92608 1830 aa18.58■□□□□ 0.57
SRRM4-204ENST00000641899 GLRX3O76003 335 aaKnown RBP18.58■□□□□ 0.56
SRRM4-204ENST00000641899 ADORA1P30542 326 aa18.58■□□□□ 0.56
SRRM4-204ENST00000641899 HOXA7P31268 230 aaPredicted RBP18.58■□□□□ 0.56
SRRM4-204ENST00000641899 RGS2P41220 211 aa18.58■□□□□ 0.56
SRRM4-204ENST00000641899 RHBDL3P58872 404 aa18.58■□□□□ 0.56
SRRM4-204ENST00000641899 MAP3K21Q5TCX8 1036 aa18.58■□□□□ 0.56
SRRM4-204ENST00000641899 WDR18Q9BV38 432 aa18.58■□□□□ 0.56
SRRM4-204ENST00000641899 SMC4Q9NTJ3 1288 aa18.58■□□□□ 0.56
SRRM4-204ENST00000641899 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.58■□□□□ 0.56
SRRM4-204ENST00000641899 MYH13Q9UKX3 1938 aa18.57■□□□□ 0.56
SRRM4-204ENST00000641899 A0A1B0GUL7 405 aa18.57■□□□□ 0.56
SRRM4-204ENST00000641899 BAG3O95817 575 aa18.57■□□□□ 0.56
SRRM4-204ENST00000641899 PLCG2P16885 1265 aa18.57■□□□□ 0.56
SRRM4-204ENST00000641899 BACE1P56817 501 aa18.57■□□□□ 0.56
SRRM4-204ENST00000641899 TIMM10P62072 90 aa18.57■□□□□ 0.56
SRRM4-204ENST00000641899 FAM109BQ6ICB4 259 aaPredicted RBP18.57■□□□□ 0.56
SRRM4-204ENST00000641899 TEX11Q8IYF3 940 aa18.57■□□□□ 0.56
SRRM4-204ENST00000641899 XAGE2Q96GT9 111 aa18.57■□□□□ 0.56
SRRM4-204ENST00000641899 RAI14Q9P0K7 980 aa18.57■□□□□ 0.56
SRRM4-204ENST00000641899 PRKAG2Q9UGJ0 569 aa18.57■□□□□ 0.56
SRRM4-204ENST00000641899 FAM196BA6NMK8 535 aa18.56■□□□□ 0.56
SRRM4-204ENST00000641899 TRIM32Q13049 653 aa18.56■□□□□ 0.56
SRRM4-204ENST00000641899 MTMR2Q13614 643 aa18.56■□□□□ 0.56
SRRM4-204ENST00000641899 ATF7IPQ6VMQ6 1270 aa18.56■□□□□ 0.56
SRRM4-204ENST00000641899 NEUROD6Q96NK8 337 aa18.56■□□□□ 0.56
SRRM4-204ENST00000641899 API5Q9BZZ5 524 aaKnown RBP18.56■□□□□ 0.56
SRRM4-204ENST00000641899 DOCK1Q14185 1865 aa18.56■□□□□ 0.56
SRRM4-204ENST00000641899 USP17L10C9JJH3 530 aa18.55■□□□□ 0.56
SRRM4-204ENST00000641899 SLURP2P0DP57 97 aa18.55■□□□□ 0.56
SRRM4-204ENST00000641899 HERVK_113P62684 666 aa18.55■□□□□ 0.56
SRRM4-204ENST00000641899 CCNA1P78396 465 aa18.55■□□□□ 0.56
SRRM4-204ENST00000641899 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.55■□□□□ 0.56
SRRM4-204ENST00000641899 CRACR2BQ8N4Y2 399 aaPredicted RBP18.55■□□□□ 0.56
SRRM4-204ENST00000641899 SPATA5Q8NB90 893 aa18.55■□□□□ 0.56
SRRM4-204ENST00000641899 LRP2BPQ9P2M1 347 aa18.55■□□□□ 0.56
SRRM4-204ENST00000641899 PA2G4Q9UQ80 394 aaKnown RBP18.55■□□□□ 0.56
SRRM4-204ENST00000641899 COL6A3P12111 3177 aa18.54■□□□□ 0.56
SRRM4-204ENST00000641899 PFASO15067 1338 aa18.54■□□□□ 0.56
SRRM4-204ENST00000641899 ZNF521Q96K83 1311 aa18.54■□□□□ 0.56
SRRM4-204ENST00000641899 MSCO60682 206 aa18.54■□□□□ 0.56
SRRM4-204ENST00000641899 COL6A1P12109 1028 aa18.54■□□□□ 0.56
SRRM4-204ENST00000641899 MFSD14CQ5VZR4 134 aa18.54■□□□□ 0.56
SRRM4-204ENST00000641899 PLEKHH3Q7Z736 793 aa18.54■□□□□ 0.56
SRRM4-204ENST00000641899 FOXP4Q8IVH2 680 aaPredicted RBP18.54■□□□□ 0.56
SRRM4-204ENST00000641899 NSUN4Q96CB9 384 aaKnown RBP18.54■□□□□ 0.56
SRRM4-204ENST00000641899 P2RX7Q99572 595 aaKnown RBP18.54■□□□□ 0.56
SRRM4-204ENST00000641899 APBA2Q99767 749 aa18.54■□□□□ 0.56
SRRM4-204ENST00000641899 UQCRFS1P1P0C7P4 283 aa18.53■□□□□ 0.56
SRRM4-204ENST00000641899 MDM2Q00987 491 aaPredicted RBP18.53■□□□□ 0.56
SRRM4-204ENST00000641899 CACNB2Q08289 660 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms