RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 SEC23AQ15436 765 aa19.77■□□□□ 0.75
PHGDH-211ENST00000641213 MAP3K14Q99558 947 aa19.77■□□□□ 0.75
PHGDH-211ENST00000641213 TFCP2L1Q9NZI6 479 aa19.77■□□□□ 0.75
PHGDH-211ENST00000641213 TRIM22Q8IYM9 498 aa19.76■□□□□ 0.75
PHGDH-211ENST00000641213 FANCBQ8NB91 859 aa19.76■□□□□ 0.75
PHGDH-211ENST00000641213 R3HCC1Q9Y3T6 440 aaKnown RBP19.76■□□□□ 0.75
PHGDH-211ENST00000641213 MROH7-TTC4A0A0A0MT08 1334 aa19.76■□□□□ 0.75
PHGDH-211ENST00000641213 CYP2D7A0A087X1C5 515 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 CCDC196A0A1B0GTZ2 297 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 GOLGA6L19H0YKK7 550 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 PPP6R2O75170 966 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 ZNF202O95125 648 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 MECOMQ03112 1051 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-211ENST00000641213 CRACR2BQ8N4Y2 399 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-211ENST00000641213 TNKSO95271 1327 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 PFKFB1P16118 471 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 TERF1P54274 439 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 NOLC1Q14978 699 aaKnown RBP eCLIP19.75■□□□□ 0.75
PHGDH-211ENST00000641213 KIAA1468Q9P260 1216 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 SPATA31A6Q5VVP1 1343 aa19.75■□□□□ 0.75
PHGDH-211ENST00000641213 MMP1P03956 469 aa19.74■□□□□ 0.75
PHGDH-211ENST00000641213 CTR9Q6PD62 1173 aa19.74■□□□□ 0.75
PHGDH-211ENST00000641213 DHX40Q8IX18 779 aaKnown RBP19.74■□□□□ 0.75
PHGDH-211ENST00000641213 CMTR1Q8N1G2 835 aaKnown RBP19.74■□□□□ 0.75
PHGDH-211ENST00000641213 NUP133Q8WUM0 1156 aa19.74■□□□□ 0.75
PHGDH-211ENST00000641213 DEXIO95424 95 aa19.74■□□□□ 0.75
PHGDH-211ENST00000641213 TPM2P07951 284 aa19.74■□□□□ 0.75
PHGDH-211ENST00000641213 FGRP09769 529 aa19.74■□□□□ 0.75
PHGDH-211ENST00000641213 SARM1Q6SZW1 724 aa19.74■□□□□ 0.75
PHGDH-211ENST00000641213 CCDC82Q8N4S0 544 aa19.74■□□□□ 0.75
PHGDH-211ENST00000641213 JMYQ8N9B5 988 aa19.74■□□□□ 0.75
PHGDH-211ENST00000641213 IRS2Q9Y4H2 1338 aa19.73■□□□□ 0.75
PHGDH-211ENST00000641213 PTGS1P23219 599 aa19.73■□□□□ 0.75
PHGDH-211ENST00000641213 TXNRD3Q86VQ6 643 aa19.73■□□□□ 0.75
PHGDH-211ENST00000641213 NOSTRINQ8IVI9 506 aa19.73■□□□□ 0.75
PHGDH-211ENST00000641213 CEP57L1Q8IYX8 460 aa19.73■□□□□ 0.75
PHGDH-211ENST00000641213 C17orf53Q8N3J3 647 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-211ENST00000641213 ENAHQ8N8S7 591 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-211ENST00000641213 ZSCAN10Q96SZ4 725 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-211ENST00000641213 KCNJ14Q9UNX9 436 aa19.73■□□□□ 0.75
PHGDH-211ENST00000641213 BTBD18B2RXH4 712 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 RFC4P35249 363 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
PHGDH-211ENST00000641213 DRC7Q8IY82 874 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.72■□□□□ 0.75
PHGDH-211ENST00000641213 BECN2A8MW95 431 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 SLC3A2P08195 630 aaKnown RBP19.72■□□□□ 0.75
PHGDH-211ENST00000641213 PCP11498 1178 aaKnown RBP19.72■□□□□ 0.75
PHGDH-211ENST00000641213 PRDX5P30044 214 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 PPP2R5BQ15173 497 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 SAFBQ15424 915 aaKnown RBP eCLIP19.72■□□□□ 0.75
PHGDH-211ENST00000641213 TRAPPC3LQ5T215 181 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 SHC4Q6S5L8 630 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 DIS3L2Q8IYB7 885 aaKnown RBP19.72■□□□□ 0.75
PHGDH-211ENST00000641213 KIAA1524Q8TCG1 905 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 NAT10Q9H0A0 1025 aaKnown RBP19.72■□□□□ 0.75
PHGDH-211ENST00000641213 SPTLC3Q9NUV7 552 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 AATFQ9NY61 560 aaKnown RBP eCLIP19.72■□□□□ 0.75
PHGDH-211ENST00000641213 PYCARDQ9ULZ3 195 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 HPSEQ9Y251 543 aa19.72■□□□□ 0.75
PHGDH-211ENST00000641213 UBR3Q6ZT12 1888 aa19.71■□□□□ 0.75
PHGDH-211ENST00000641213 USP17L12C9JPN9 530 aa19.71■□□□□ 0.75
PHGDH-211ENST00000641213 USP17L21D6R901 530 aa19.71■□□□□ 0.75
PHGDH-211ENST00000641213 PRDM1O75626 825 aa19.71■□□□□ 0.75
PHGDH-211ENST00000641213 CDC25BP30305 580 aa19.71■□□□□ 0.75
PHGDH-211ENST00000641213 CCDC186Q7Z3E2 898 aa19.71■□□□□ 0.75
PHGDH-211ENST00000641213 TIGD1Q96MW7 591 aa19.71■□□□□ 0.75
PHGDH-211ENST00000641213 NRBP1Q9UHY1 535 aa19.71■□□□□ 0.75
PHGDH-211ENST00000641213 NPHP1O15259 732 aa19.71■□□□□ 0.75
PHGDH-211ENST00000641213 FBXW7Q969H0 707 aa19.71■□□□□ 0.75
PHGDH-211ENST00000641213 GJD4Q96KN9 370 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-211ENST00000641213 CRNKL1Q9BZJ0 848 aaKnown RBP19.71■□□□□ 0.75
PHGDH-211ENST00000641213 FOXP1Q9H334 677 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-211ENST00000641213 DCP1AQ9NPI6 582 aaPredicted RBP19.71■□□□□ 0.75
PHGDH-211ENST00000641213 FAM237AA0A1B0GTK4 181 aa19.7■□□□□ 0.74
PHGDH-211ENST00000641213 SYKP43405 635 aa19.7■□□□□ 0.74
PHGDH-211ENST00000641213 TOB1P50616 345 aaPredicted RBP19.7■□□□□ 0.74
PHGDH-211ENST00000641213 RESP18Q5W5W9 173 aa19.7■□□□□ 0.74
PHGDH-211ENST00000641213 AOPEPQ8N6M6 819 aa19.7■□□□□ 0.74
PHGDH-211ENST00000641213 CLIP2Q9UDT6 1046 aa19.7■□□□□ 0.74
PHGDH-211ENST00000641213 ZBTB22O15209 634 aa19.69■□□□□ 0.74
PHGDH-211ENST00000641213 CUTAO60888 179 aa19.69■□□□□ 0.74
PHGDH-211ENST00000641213 NFIXQ14938 502 aa19.69■□□□□ 0.74
PHGDH-211ENST00000641213 DPCR1Q3MIW9 517 aa19.69■□□□□ 0.74
PHGDH-211ENST00000641213 IFIT1BQ5T764 474 aaKnown RBP19.69■□□□□ 0.74
PHGDH-211ENST00000641213 FAM196AQ6ZSG2 479 aa19.69■□□□□ 0.74
PHGDH-211ENST00000641213 IQCA1Q86XH1 822 aa19.69■□□□□ 0.74
PHGDH-211ENST00000641213 CLIC6Q96NY7 704 aa19.69■□□□□ 0.74
PHGDH-211ENST00000641213 RNF26Q9BY78 433 aaPredicted RBP19.69■□□□□ 0.74
PHGDH-211ENST00000641213 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.69■□□□□ 0.74
PHGDH-211ENST00000641213 RBM6P78332 1123 aaKnown RBP19.69■□□□□ 0.74
PHGDH-211ENST00000641213 EVX2Q03828 476 aa19.69■□□□□ 0.74
PHGDH-211ENST00000641213 ZRSR1Q15695 479 aaKnown RBP19.69■□□□□ 0.74
PHGDH-211ENST00000641213 MRFAP1L1Q96HT8 127 aa19.69■□□□□ 0.74
PHGDH-211ENST00000641213 ATP8A2Q9NTI2 1148 aa19.69■□□□□ 0.74
PHGDH-211ENST00000641213 TMED8Q6PL24 325 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-211ENST00000641213 CATIPQ7Z7H3 387 aa19.68■□□□□ 0.74
PHGDH-211ENST00000641213 BPIFA3Q9BQP9 254 aa19.68■□□□□ 0.74
PHGDH-211ENST00000641213 JAG2Q9Y219 1238 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms