RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 MTMR6Q9Y217 621 aa21.4■■□□□ 1.02
PHGDH-209ENST00000641074 ADAMTSL1Q8N6G6 1762 aa21.4■■□□□ 1.02
PHGDH-209ENST00000641074 ERICH2A1L162 156 aa21.39■■□□□ 1.01
PHGDH-209ENST00000641074 PTPDC1A2A3K4 754 aa21.39■■□□□ 1.01
PHGDH-209ENST00000641074 DDX11L8A8MPP1 907 aa21.39■■□□□ 1.01
PHGDH-209ENST00000641074 POLR3DP05423 398 aaPredicted RBP21.39■■□□□ 1.01
PHGDH-209ENST00000641074 PDCP20941 246 aa21.39■■□□□ 1.01
PHGDH-209ENST00000641074 PLCD1P51178 756 aa21.39■■□□□ 1.01
PHGDH-209ENST00000641074 WTAPQ15007 396 aa21.39■■□□□ 1.01
PHGDH-209ENST00000641074 APOBEC3HQ6NTF7 200 aaKnown RBP21.39■■□□□ 1.01
PHGDH-209ENST00000641074 MRIQ9BWK5 157 aa21.39■■□□□ 1.01
PHGDH-209ENST00000641074 ROBO3Q96MS0 1386 aa21.39■■□□□ 1.01
PHGDH-209ENST00000641074 COL4A5P29400 1685 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 DYNLL2Q96FJ2 89 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 CHAMP1Q96JM3 812 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 VPS33BQ9H267 617 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 USP40Q9NVE5 1235 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 DDX60LQ5H9U9 1706 aaKnown RBP21.38■■□□□ 1.01
PHGDH-209ENST00000641074 TNKSO95271 1327 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 CCDC69A6NI79 296 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 ZBTB43O43298 467 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 DHX16O60231 1041 aaKnown RBP21.38■■□□□ 1.01
PHGDH-209ENST00000641074 SEC23AQ15436 765 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 ZDHHC15Q96MV8 337 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 ZSCAN10Q96SZ4 725 aaPredicted RBP21.38■■□□□ 1.01
PHGDH-209ENST00000641074 SLC12A7Q9Y666 1083 aa21.38■■□□□ 1.01
PHGDH-209ENST00000641074 FOCADQ5VW36 1801 aa21.37■■□□□ 1.01
PHGDH-209ENST00000641074 VPS37CA5D8V6 355 aaPredicted RBP21.37■■□□□ 1.01
PHGDH-209ENST00000641074 WDHD1O75717 1129 aaPredicted RBP21.37■■□□□ 1.01
PHGDH-209ENST00000641074 PDIA4P13667 645 aaKnown RBP21.37■■□□□ 1.01
PHGDH-209ENST00000641074 RXRAP19793 462 aa21.37■■□□□ 1.01
PHGDH-209ENST00000641074 METAP2P50579 478 aaKnown RBP eCLIP21.37■■□□□ 1.011e-6■■□□□ 12.1
PHGDH-209ENST00000641074 HMGN5P82970 282 aaKnown RBP21.37■■□□□ 1.01
PHGDH-209ENST00000641074 HDLBPQ00341 1268 aaKnown RBP21.37■■□□□ 1.01
PHGDH-209ENST00000641074 CDC42EP5Q6NZY7 148 aa21.37■■□□□ 1.01
PHGDH-209ENST00000641074 MICU3Q86XE3 530 aa21.37■■□□□ 1.01
PHGDH-209ENST00000641074 TMTC2Q8N394 836 aa21.37■■□□□ 1.01
PHGDH-209ENST00000641074 MYL10Q9BUA6 226 aa21.37■■□□□ 1.01
PHGDH-209ENST00000641074 PPFIA3O75145 1194 aa21.36■■□□□ 1.01
PHGDH-209ENST00000641074 F13A1P00488 732 aa21.36■■□□□ 1.01
PHGDH-209ENST00000641074 FAM47AQ5JRC9 791 aa21.36■■□□□ 1.01
PHGDH-209ENST00000641074 MCTP1Q6DN14 999 aa21.36■■□□□ 1.01
PHGDH-209ENST00000641074 IQCA1Q86XH1 822 aa21.36■■□□□ 1.01
PHGDH-209ENST00000641074 FAM184AQ8NB25 1140 aa21.36■■□□□ 1.01
PHGDH-209ENST00000641074 PICALMQ13492 652 aa21.36■■□□□ 1.01
PHGDH-209ENST00000641074 ENAHQ8N8S7 591 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-209ENST00000641074 PCDHAC2Q9Y5I4 1007 aa21.36■■□□□ 1.01
PHGDH-209ENST00000641074 CPLX1O14810 134 aa21.35■■□□□ 1.01
PHGDH-209ENST00000641074 RAD17O75943 681 aa21.35■■□□□ 1.01
PHGDH-209ENST00000641074 ADD1P35611 737 aaKnown RBP21.35■■□□□ 1.01
PHGDH-209ENST00000641074 IARSP41252 1262 aaKnown RBP21.35■■□□□ 1.01
PHGDH-209ENST00000641074 SYNE3Q6ZMZ3 975 aa21.35■■□□□ 1.01
PHGDH-209ENST00000641074 CCDC144CPQ8IYA2 1237 aa21.35■■□□□ 1.01
PHGDH-209ENST00000641074 DDX4Q9NQI0 724 aaKnown RBP21.35■■□□□ 1.01
PHGDH-209ENST00000641074 SERPINA10Q9UK55 444 aa21.35■■□□□ 1.01
PHGDH-209ENST00000641074 PSME4Q14997 1843 aa21.35■■□□□ 1.01
PHGDH-209ENST00000641074 MYH1P12882 1939 aa21.35■■□□□ 1.01
PHGDH-209ENST00000641074 GOLGA8AA7E2F4 631 aa21.34■■□□□ 1.01
PHGDH-209ENST00000641074 GOLGA6L22H0YM25 854 aa21.34■■□□□ 1.01
PHGDH-209ENST00000641074 FDPSP14324 419 aaKnown RBP21.34■■□□□ 1.01
PHGDH-209ENST00000641074 CDC27P30260 824 aa21.34■■□□□ 1.01
PHGDH-209ENST00000641074 CDC37L1Q7L3B6 337 aa21.34■■□□□ 1.01
PHGDH-209ENST00000641074 SLC44A5Q8NCS7 719 aa21.34■■□□□ 1.01
PHGDH-209ENST00000641074 TAOK3Q9H2K8 898 aa21.34■■□□□ 1.01
PHGDH-209ENST00000641074 MKNK2Q9HBH9 465 aa21.34■■□□□ 1.01
PHGDH-209ENST00000641074 FAM217BQ9NTX9 383 aaPredicted RBP21.34■■□□□ 1.01
PHGDH-209ENST00000641074 FER1L6Q2WGJ9 1857 aa21.34■■□□□ 1.01
PHGDH-209ENST00000641074 TSPY2A6NKD2 308 aa21.33■■□□□ 1.01
PHGDH-209ENST00000641074 RBM5P52756 815 aaKnown RBP eCLIP21.33■■□□□ 1.01
PHGDH-209ENST00000641074 FOXD4L6Q3SYB3 417 aaPredicted RBP21.33■■□□□ 1.01
PHGDH-209ENST00000641074 RSBN1LQ6PCB5 846 aaPredicted RBP21.33■■□□□ 1.01
PHGDH-209ENST00000641074 FOXD4L3Q6VB84 417 aaPredicted RBP21.33■■□□□ 1.01
PHGDH-209ENST00000641074 BCS1LQ9Y276 419 aa21.33■■□□□ 1.01
PHGDH-209ENST00000641074 NID2Q14112 1375 aa21.33■■□□□ 1
PHGDH-209ENST00000641074 PSMD14O00487 310 aa21.33■■□□□ 1
PHGDH-209ENST00000641074 NMT2O60551 498 aa21.33■■□□□ 1
PHGDH-209ENST00000641074 VIL1P09327 827 aaKnown RBP21.33■■□□□ 1
PHGDH-209ENST00000641074 NT5C2P49902 561 aa21.33■■□□□ 1
PHGDH-209ENST00000641074 C16orf86Q6ZW13 317 aa21.33■■□□□ 1
PHGDH-209ENST00000641074 NIM1KQ8IY84 436 aa21.33■■□□□ 1
PHGDH-209ENST00000641074 ZNF654Q8IZM8 581 aa21.33■■□□□ 1
PHGDH-209ENST00000641074 ZNRF3Q9ULT6 936 aa21.33■■□□□ 1
PHGDH-209ENST00000641074 KIF3AQ9Y496 699 aa21.33■■□□□ 1
PHGDH-209ENST00000641074 TFAP4Q01664 338 aa21.32■■□□□ 1
PHGDH-209ENST00000641074 IFIT1BQ5T764 474 aaKnown RBP21.32■■□□□ 1
PHGDH-209ENST00000641074 MYO3BQ8WXR4 1341 aa21.32■■□□□ 1
PHGDH-209ENST00000641074 NFKBIEO00221 500 aa21.31■■□□□ 1
PHGDH-209ENST00000641074 CDK8P49336 464 aa21.31■■□□□ 1
PHGDH-209ENST00000641074 NFIAQ12857 509 aa21.31■■□□□ 1
PHGDH-209ENST00000641074 NLGN2Q8NFZ4 835 aa21.31■■□□□ 1
PHGDH-209ENST00000641074 ZNF287Q9HBT7 754 aa21.31■■□□□ 1
PHGDH-209ENST00000641074 ECM29Q5VYK3 1845 aa21.31■■□□□ 1
PHGDH-209ENST00000641074 RASA1P20936 1047 aa21.31■■□□□ 1
PHGDH-209ENST00000641074 RCAN1P53805 252 aa21.31■■□□□ 1
PHGDH-209ENST00000641074 NTRK3Q16288 839 aa21.31■■□□□ 1
PHGDH-209ENST00000641074 ZNF444Q8N0Y2 327 aaPredicted RBP21.31■■□□□ 1
PHGDH-209ENST00000641074 GMLQ99445 158 aa21.31■■□□□ 1
PHGDH-209ENST00000641074 OSBPL5Q9H0X9 879 aaPredicted RBP21.31■■□□□ 1
PHGDH-209ENST00000641074 ORC3Q9UBD5 711 aaPredicted RBP21.31■■□□□ 1
PHGDH-209ENST00000641074 H3BQV1 296 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms