RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 MAST3O60307 1309 aa19.83■□□□□ 0.76
SCARB2-223ENST00000640640 CTAGE9A4FU28 777 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 CKAP4Q07065 602 aaKnown RBP19.82■□□□□ 0.76
SCARB2-223ENST00000640640 RBM26Q5T8P6 1007 aaKnown RBP19.82■□□□□ 0.76
SCARB2-223ENST00000640640 FANCBQ8NB91 859 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 AKR1B15C9JRZ8 316 aaPredicted RBP19.82■□□□□ 0.76
SCARB2-223ENST00000640640 TACC1O75410 805 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 HS2ST1Q7LGA3 356 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 TULP4Q9NRJ4 1543 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 TNKSO95271 1327 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 KRT13P13646 458 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 ARID5AQ03989 594 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 PAF1Q8N7H5 531 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 IGKV5-2P06315 115 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 CMTR1Q8N1G2 835 aaKnown RBP19.82■□□□□ 0.76
SCARB2-223ENST00000640640 FBXO18Q8NFZ0 1043 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 FERMT2Q96AC1 680 aa19.82■□□□□ 0.76
SCARB2-223ENST00000640640 LRRC7Q96NW7 1537 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 POSTNQ15063 836 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 NLRP10Q86W26 655 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 VPS16Q9H269 839 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 ARID4AP29374 1257 aaPredicted RBP19.81■□□□□ 0.76
SCARB2-223ENST00000640640 TXKP42681 527 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 PDE4DQ08499 809 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 IFFO1Q0D2I5 559 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 NONOQ15233 471 aaKnown RBP eCLIP19.81■□□□□ 0.76
SCARB2-223ENST00000640640 IGSF22Q8N9C0 903 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 BICD1Q96G01 975 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 GUCA1BQ9UMX6 200 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 CCNT1O60563 726 aaKnown RBP19.81■□□□□ 0.76
SCARB2-223ENST00000640640 NOSTRINQ8IVI9 506 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 NEK11Q8NG66 645 aa19.81■□□□□ 0.76
SCARB2-223ENST00000640640 MTX1Q13505 466 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 CTNNBL1Q8WYA6 563 aaPredicted RBP19.8■□□□□ 0.76
SCARB2-223ENST00000640640 NAP1L4Q99733 375 aaKnown RBP19.8■□□□□ 0.76
SCARB2-223ENST00000640640 KIAA1468Q9P260 1216 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 PPP1R2P41236 205 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 UBE4AQ14139 1066 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 MFSD14BQ5SR56 506 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 PIGBQ92521 554 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 CTNND2Q9UQB3 1225 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 ZMYM6O95789 1325 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 SPATA31A3Q5VYP0 1347 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 GSTTP1A0A1W2PQM5 241 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 FAM13AO94988 1023 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 TBC1D5Q92609 795 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 TBC1D8BQ0IIM8 1120 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 USPL1Q5W0Q7 1092 aa19.8■□□□□ 0.76
SCARB2-223ENST00000640640 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 PFKFB1P16118 471 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 PI16Q6UXB8 463 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 KRT25Q7Z3Z0 450 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 USP37Q86T82 979 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 ZNF569Q5MCW4 686 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 C17orf53Q8N3J3 647 aaPredicted RBP19.79■□□□□ 0.76
SCARB2-223ENST00000640640 ZSCAN10Q96SZ4 725 aaPredicted RBP19.79■□□□□ 0.76
SCARB2-223ENST00000640640 LZTS2Q9BRK4 669 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 IBSPP21815 317 aaPredicted RBP19.79■□□□□ 0.76
SCARB2-223ENST00000640640 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 CCDC65Q8IXS2 484 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 STAMQ92783 540 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 CCDC113Q9H0I3 377 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 GOPCQ9HD26 462 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 CDC42BPGQ6DT37 1551 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 TRAF5O00463 557 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 NECTIN1Q15223 517 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 CEP112Q8N8E3 955 aa19.79■□□□□ 0.76
SCARB2-223ENST00000640640 USP31Q70CQ4 1352 aa19.78■□□□□ 0.76
SCARB2-223ENST00000640640 BTBD18B2RXH4 712 aa19.78■□□□□ 0.76
SCARB2-223ENST00000640640 SLC1A4P43007 532 aa19.78■□□□□ 0.76
SCARB2-223ENST00000640640 EPHA10Q5JZY3 1008 aa19.78■□□□□ 0.76
SCARB2-223ENST00000640640 SYNRGQ9UMZ2 1314 aa19.78■□□□□ 0.76
SCARB2-223ENST00000640640 H7C1W4 665 aa19.78■□□□□ 0.76
SCARB2-223ENST00000640640 FCHSD1Q86WN1 690 aa19.78■□□□□ 0.76
SCARB2-223ENST00000640640 KRT222Q8N1A0 295 aa19.78■□□□□ 0.76
SCARB2-223ENST00000640640 GTF2IP78347 998 aa19.78■□□□□ 0.76
SCARB2-223ENST00000640640 SEC31BQ9NQW1 1179 aa19.78■□□□□ 0.76
SCARB2-223ENST00000640640 PPRC1Q5VV67 1664 aaKnown RBP19.78■□□□□ 0.76
SCARB2-223ENST00000640640 OSBP2Q969R2 916 aa19.77■□□□□ 0.76
SCARB2-223ENST00000640640 PCDHA7Q9UN72 937 aa19.77■□□□□ 0.76
SCARB2-223ENST00000640640 CTR9Q6PD62 1173 aa19.77■□□□□ 0.76
SCARB2-223ENST00000640640 LRWD1Q9UFC0 647 aa19.77■□□□□ 0.76
SCARB2-223ENST00000640640 ARHGEF40Q8TER5 1519 aa19.77■□□□□ 0.76
SCARB2-223ENST00000640640 LAMC1P11047 1609 aa19.77■□□□□ 0.76
SCARB2-223ENST00000640640 WDHD1O75717 1129 aaPredicted RBP19.77■□□□□ 0.76
SCARB2-223ENST00000640640 CSGALNACT2Q8N6G5 542 aa19.77■□□□□ 0.76
SCARB2-223ENST00000640640 GLT8D2Q9H1C3 349 aa19.77■□□□□ 0.76
SCARB2-223ENST00000640640 MCM6Q14566 821 aa19.77■□□□□ 0.75
SCARB2-223ENST00000640640 TAOK3Q9H2K8 898 aa19.77■□□□□ 0.75
SCARB2-223ENST00000640640 ADGRL3Q9HAR2 1447 aa19.76■□□□□ 0.75
SCARB2-223ENST00000640640 SHTN1A0MZ66 631 aa19.76■□□□□ 0.75
SCARB2-223ENST00000640640 PAK1Q13153 545 aa19.76■□□□□ 0.75
SCARB2-223ENST00000640640 GOLGA1Q92805 767 aa19.76■□□□□ 0.75
SCARB2-223ENST00000640640 NOC4LQ9BVI4 516 aaKnown RBP19.76■□□□□ 0.75
SCARB2-223ENST00000640640 IMPACTQ9P2X3 320 aa19.76■□□□□ 0.75
SCARB2-223ENST00000640640 MED23Q9ULK4 1368 aa19.76■□□□□ 0.75
SCARB2-223ENST00000640640 CNNM4Q6P4Q7 775 aa19.76■□□□□ 0.75
SCARB2-223ENST00000640640 APOA5Q6Q788 366 aa19.76■□□□□ 0.75
SCARB2-223ENST00000640640 NSUN7Q8NE18 718 aaKnown RBP19.76■□□□□ 0.75
SCARB2-223ENST00000640640 SH2D4AQ9H788 454 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms