RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 NPHS2Q9NP85 383 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 RABGEF1Q9UJ41 708 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 COL14A1Q05707 1796 aaKnown RBP9.15□□□□□ -0.94
NECAP1-220ENST00000639841 NRXN1Q9ULB1 1477 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 DISP2A7MBM2 1401 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 PIK3C2GO75747 1445 aa9.15□□□□□ -0.94
NECAP1-220ENST00000639841 HOXB3P14651 431 aaPredicted RBP9.15□□□□□ -0.95
NECAP1-220ENST00000639841 PSMA6P60900 246 aaKnown RBP9.15□□□□□ -0.95
NECAP1-220ENST00000639841 CT47A1Q5JQC4 288 aaPredicted RBP9.15□□□□□ -0.95
NECAP1-220ENST00000639841 AKAP4Q5JQC9 854 aa9.15□□□□□ -0.95
NECAP1-220ENST00000639841 SH3PXD2AQ5TCZ1 1133 aa9.15□□□□□ -0.95
NECAP1-220ENST00000639841 TCEAL8Q8IYN2 117 aa9.15□□□□□ -0.95
NECAP1-220ENST00000639841 FOXJ1Q92949 421 aa9.15□□□□□ -0.95
NECAP1-220ENST00000639841 TNKS2Q9H2K2 1166 aa9.15□□□□□ -0.95
NECAP1-220ENST00000639841 KLK14Q9P0G3 267 aa9.15□□□□□ -0.95
NECAP1-220ENST00000639841 NOB1Q9ULX3 412 aaKnown RBP9.15□□□□□ -0.95
NECAP1-220ENST00000639841 BRWD3Q6RI45 1802 aa9.14□□□□□ -0.95
NECAP1-220ENST00000639841 PSDA5PKW4 1024 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-220ENST00000639841 C11orf95C9JLR9 678 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-220ENST00000639841 F2P00734 622 aa9.14□□□□□ -0.95
NECAP1-220ENST00000639841 RAB15P59190 212 aa9.14□□□□□ -0.95
NECAP1-220ENST00000639841 PIN1Q13526 163 aaPredicted RBP9.14□□□□□ -0.95
NECAP1-220ENST00000639841 GRIN2CQ14957 1233 aa9.14□□□□□ -0.95
NECAP1-220ENST00000639841 MLC1Q15049 377 aa9.14□□□□□ -0.95
NECAP1-220ENST00000639841 PDILTQ8N807 584 aa9.14□□□□□ -0.95
NECAP1-220ENST00000639841 PRDM9Q9NQV7 894 aa9.14□□□□□ -0.95
NECAP1-220ENST00000639841 ZMYM5Q9UJ78 669 aa9.14□□□□□ -0.95
NECAP1-220ENST00000639841 DHX57Q6P158 1386 aaKnown RBP9.14□□□□□ -0.95
NECAP1-220ENST00000639841 SPATA31E1Q6ZUB1 1445 aa9.14□□□□□ -0.95
NECAP1-220ENST00000639841 YTHDC2Q9H6S0 1430 aaKnown RBP9.14□□□□□ -0.95
NECAP1-220ENST00000639841 GJB6O95452 261 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 SRGNP10124 158 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 SOX5P35711 763 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 TRAPPC10P48553 1259 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 MMP16P51512 607 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 APOBRQ0VD83 1088 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 C11orf91Q3C1V1 193 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 KRT27Q7Z3Y8 459 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-220ENST00000639841 IFT43Q96FT9 208 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 DAAM1Q9Y4D1 1078 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 TIMM44O43615 452 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 TNFRSF21O75509 655 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 GIPRP48546 466 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 MTMR1Q13613 665 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 CBX2Q14781 532 aaPredicted RBP9.13□□□□□ -0.95
NECAP1-220ENST00000639841 MSS51Q4VC12 460 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 PERM1Q5SV97 790 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 FAM102BQ5T8I3 360 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 NXNQ6DKJ4 435 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 KRT28Q7Z3Y7 464 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 DGKHQ86XP1 1220 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 C3orf58Q8NDZ4 430 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 STAC3Q96MF2 364 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 SUPT16HQ9Y5B9 1047 aaKnown RBP9.13□□□□□ -0.95
NECAP1-220ENST00000639841 PPP2R3BQ9Y5P8 575 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 NRAPQ86VF7 1730 aa9.13□□□□□ -0.95
NECAP1-220ENST00000639841 GSG1L2A8MUP6 293 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 EYA4O95677 639 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 PCSK2P16519 638 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 COPB2P35606 906 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 POU5F1Q01860 360 aaKnown RBP9.12□□□□□ -0.95
NECAP1-220ENST00000639841 MTFR1Q15390 333 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 CCDC85BQ15834 202 aaPredicted RBP9.12□□□□□ -0.95
NECAP1-220ENST00000639841 ICE2Q659A1 982 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 ENOX1Q8TC92 643 aaKnown RBP9.12□□□□□ -0.95
NECAP1-220ENST00000639841 SMAD5Q99717 465 aaKnown RBP9.12□□□□□ -0.95
NECAP1-220ENST00000639841 TPX2Q9ULW0 747 aaKnown RBP9.12□□□□□ -0.95
NECAP1-220ENST00000639841 SSRP1Q08945 709 aaKnown RBP9.12□□□□□ -0.95
NECAP1-220ENST00000639841 KCTD2Q14681 263 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 RINLQ6ZS11 566 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 STRA8Q7Z7C7 330 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 SLITRK4Q8IW52 837 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 ATL2Q8NHH9 583 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 HOOK2Q96ED9 719 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 C1QTNF2Q9BXJ5 285 aa9.12□□□□□ -0.95
NECAP1-220ENST00000639841 GPRASP1Q5JY77 1395 aa9.11□□□□□ -0.95
NECAP1-220ENST00000639841 ITSN1Q15811 1721 aa9.11□□□□□ -0.95
NECAP1-220ENST00000639841 LARP1BQ659C4 914 aaKnown RBP9.11□□□□□ -0.95
NECAP1-220ENST00000639841 IL31Q6EBC2 164 aa9.11□□□□□ -0.95
NECAP1-220ENST00000639841 MAGEB6Q8N7X4 407 aa9.11□□□□□ -0.95
NECAP1-220ENST00000639841 PHC3Q8NDX5 983 aa9.11□□□□□ -0.95
NECAP1-220ENST00000639841 TLR6Q9Y2C9 796 aa9.11□□□□□ -0.95
NECAP1-220ENST00000639841 NEK3P51956 506 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 EIF6P56537 245 aaKnown RBP9.1□□□□□ -0.95
NECAP1-220ENST00000639841 PABPC4Q13310 644 aaKnown RBP eCLIP9.1□□□□□ -0.95
NECAP1-220ENST00000639841 CCDC174Q6PII3 467 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 TREML1Q86YW5 311 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 SDR16C5Q8N3Y7 309 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 NKD1Q969G9 470 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 ZFYVE28Q9HCC9 887 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 LUZP4Q9P127 313 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 EML1O00423 815 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 MYL3P08590 195 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 MAP3K11Q16584 847 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 CTC1Q2NKJ3 1217 aa9.1□□□□□ -0.95
NECAP1-220ENST00000639841 BPHLQ86WA6 291 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-220ENST00000639841 ALDH16A1Q8IZ83 802 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms