RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 APPP05067 770 aa16.24■□□□□ 0.19
ATRIP-208ENST00000639561 SAMD7Q7Z3H4 446 aa16.24■□□□□ 0.19
ATRIP-208ENST00000639561 IQSEC3Q9UPP2 1182 aaPredicted RBP16.24■□□□□ 0.19
ATRIP-208ENST00000639561 COL1A1P02452 1464 aaPredicted RBP16.24■□□□□ 0.19
ATRIP-208ENST00000639561 ZNF646O15015 1829 aaPredicted RBP16.24■□□□□ 0.19
ATRIP-208ENST00000639561 MBD4O95243 580 aa16.24■□□□□ 0.19
ATRIP-208ENST00000639561 VEGFBP49765 207 aa16.24■□□□□ 0.19
ATRIP-208ENST00000639561 RESTQ13127 1097 aa16.24■□□□□ 0.19
ATRIP-208ENST00000639561 CSPP1Q1MSJ5 1256 aa16.24■□□□□ 0.19
ATRIP-208ENST00000639561 KIF4BQ2VIQ3 1234 aa16.24■□□□□ 0.19
ATRIP-208ENST00000639561 TBC1D10BQ4KMP7 808 aaPredicted RBP16.24■□□□□ 0.19
ATRIP-208ENST00000639561 RALYLQ86SE5 291 aaKnown RBP16.24■□□□□ 0.19
ATRIP-208ENST00000639561 FAM184AQ8NB25 1140 aa16.24■□□□□ 0.19
ATRIP-208ENST00000639561 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
ATRIP-208ENST00000639561 GYG1P46976 350 aa16.23■□□□□ 0.19
ATRIP-208ENST00000639561 ARMT1Q9H993 441 aa16.23■□□□□ 0.19
ATRIP-208ENST00000639561 MYO3BQ8WXR4 1341 aa16.23■□□□□ 0.19
ATRIP-208ENST00000639561 THSD7BQ9C0I4 1608 aa16.23■□□□□ 0.19
ATRIP-208ENST00000639561 ECE1P42892 770 aa16.23■□□□□ 0.19
ATRIP-208ENST00000639561 HMGN5P82970 282 aaKnown RBP16.23■□□□□ 0.19
ATRIP-208ENST00000639561 CCDC183Q5T5S1 534 aa16.23■□□□□ 0.19
ATRIP-208ENST00000639561 HPS5Q9UPZ3 1129 aa16.23■□□□□ 0.19
ATRIP-208ENST00000639561 ELP1O95163 1332 aa16.23■□□□□ 0.19
ATRIP-208ENST00000639561 H3BQV1 296 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 CELF2O95319 508 aaKnown RBP16.22■□□□□ 0.19
ATRIP-208ENST00000639561 ZNF280AP59817 542 aaPredicted RBP16.22■□□□□ 0.19
ATRIP-208ENST00000639561 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 DCPSQ96C86 337 aaKnown RBP16.22■□□□□ 0.19
ATRIP-208ENST00000639561 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.22■□□□□ 0.19
ATRIP-208ENST00000639561 TFIP11Q9UBB9 837 aaKnown RBP16.22■□□□□ 0.19
ATRIP-208ENST00000639561 TLL2Q9Y6L7 1015 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 WDR19Q8NEZ3 1342 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 POLR2AP24928 1970 aaKnown RBP16.22■□□□□ 0.19
ATRIP-208ENST00000639561 KLF18A0A0U1RQI7 1052 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 FMR1Q06787 632 aaKnown RBP eCLIP16.22■□□□□ 0.19
ATRIP-208ENST00000639561 UBE4AQ14139 1066 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 ALX1Q15699 326 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
ATRIP-208ENST00000639561 CST9Q5W186 159 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 CYB5R4Q7L1T6 521 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 ZMYM6O95789 1325 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 NEDD4P46934 1319 aa16.22■□□□□ 0.19
ATRIP-208ENST00000639561 PATL2C9JE40 543 aaKnown RBP16.21■□□□□ 0.19
ATRIP-208ENST00000639561 USP17L8P0C7I0 530 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 FDPSP14324 419 aaKnown RBP16.21■□□□□ 0.19
ATRIP-208ENST00000639561 FOSBP53539 338 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 IFNL3Q8IZI9 196 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 LCORLQ8N3X6 602 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 GOLGA8BA8MQT2 603 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 GSG1L2A8MUP6 293 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 PRKAB2O43741 272 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 MMP14P50281 582 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 STRIP1Q5VSL9 837 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 ADGRA1Q86SQ6 560 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 RAB11FIP4Q86YS3 637 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 GMLQ99445 158 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 INCENPQ9NQS7 918 aa16.21■□□□□ 0.19
ATRIP-208ENST00000639561 KLRK1P26718 216 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 TRDNQ13061 729 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 NAA16Q6N069 864 aaPredicted RBP16.2■□□□□ 0.18
ATRIP-208ENST00000639561 C15orf52Q6ZUT6 534 aaKnown RBP16.2■□□□□ 0.18
ATRIP-208ENST00000639561 PAXIP1Q6ZW49 1069 aaPredicted RBP16.2■□□□□ 0.18
ATRIP-208ENST00000639561 KRT26Q7Z3Y9 468 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 FAM43AQ8N2R8 423 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 LEO1Q8WVC0 666 aaPredicted RBP16.2■□□□□ 0.18
ATRIP-208ENST00000639561 PPP1R9BQ96SB3 815 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 LRP2BPQ9P2M1 347 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 TACC3Q9Y6A5 838 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 B4E1Z4 1266 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 EGFRP00533 1210 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 MIGA1Q8NAN2 632 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 RNF214Q8ND24 703 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 FBXW7Q969H0 707 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 HHIPL1Q96JK4 782 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 SPATA32Q96LK8 384 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 SCAND2PQ9GZW5 306 aaPredicted RBP16.2■□□□□ 0.18
ATRIP-208ENST00000639561 TSPY26PQ9H489 355 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 MYH15Q9Y2K3 1946 aa16.2■□□□□ 0.18
ATRIP-208ENST00000639561 CCDC173Q0VFZ6 552 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 DACT2Q5SW24 774 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 FAM84BQ96KN1 310 aaPredicted RBP16.19■□□□□ 0.18
ATRIP-208ENST00000639561 CAPNS2Q96L46 248 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 NAPBQ9H115 298 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 ZSCAN16Q9H4T2 348 aaPredicted RBP16.19■□□□□ 0.18
ATRIP-208ENST00000639561 ZNF408Q9H9D4 720 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 SH2B2O14492 632 aaPredicted RBP16.19■□□□□ 0.18
ATRIP-208ENST00000639561 CTDSPL2Q05D32 466 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 TXNRD3Q86VQ6 643 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 SULF1Q8IWU6 871 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 SENP2Q9HC62 589 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 MYOZ2Q9NPC6 264 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 RRAGDQ9NQL2 400 aaPredicted RBP16.19■□□□□ 0.18
ATRIP-208ENST00000639561 GGA3Q9NZ52 723 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
ATRIP-208ENST00000639561 ANGEL1Q9UNK9 670 aaKnown RBP16.19■□□□□ 0.18
ATRIP-208ENST00000639561 ADD1P35611 737 aaKnown RBP16.18■□□□□ 0.18
ATRIP-208ENST00000639561 ZNF804AQ7Z570 1209 aa16.18■□□□□ 0.18
ATRIP-208ENST00000639561 SAPCD2Q86UD0 394 aa16.18■□□□□ 0.18
ATRIP-208ENST00000639561 OGFOD1Q8N543 542 aa16.18■□□□□ 0.18
ATRIP-208ENST00000639561 KIF3AQ9Y496 699 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms