RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 SLC45A1Q9Y2W3 748 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 MTUS2Q5JR59 1369 aa4.83□□□□□ -1.64
SCN3A-209ENST00000639244 BBOX1O75936 387 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 HSPA8P11142 646 aaKnown RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 KRT13P13646 458 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 SYCP2LQ5T4T6 812 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 TMEM87BQ96K49 555 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 MYH9P35579 1960 aaKnown RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 HOXA10P31260 410 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 ACTN2P35609 894 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 TUBA3EQ6PEY2 450 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 SMC1BQ8NDV3 1235 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 APPBP2Q92624 585 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 NACAP1Q9BZK3 213 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 MRPL46Q9H2W6 279 aaKnown RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 CLASP2O75122 1294 aaKnown RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 SLC4A10Q6U841 1118 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 GAS2L2Q8NHY3 880 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 CUL5Q93034 780 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 TSG101Q99816 390 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 BRD8Q9H0E9 1235 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 TTI1O43156 1089 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 USO1O60763 962 aaKnown RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 USH1GQ495M9 461 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 EXOC6Q8TAG9 804 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 PCMTD1Q96MG8 357 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 IER2Q9BTL4 223 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 CLIC5Q9NZA1 410 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 GOLGA6L7A0A1B0GV03 622 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 CARNS1A5YM72 827 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 SPECC1L-ADORA2AF8WAN1 911 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 SEMA3EO15041 775 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 YEATS4O95619 227 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 DR1Q01658 176 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 TCEAL1Q15170 157 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 CENPOQ9BU64 300 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 BHMT2Q9H2M3 363 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 SENP2Q9HC62 589 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 NPC1L1Q9UHC9 1359 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 EIF3FO00303 357 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 VPS72Q15906 364 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 TSC22D3Q99576 134 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 TCP11L1Q9NUJ3 509 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 TRAF3IP3Q9Y228 551 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 CCDC163A0A0D9SF12 145 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 CHL1O00533 1208 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 DDHD2O94830 711 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 POLR2EP19388 210 aaKnown RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 CTNNA1P35221 906 aaKnown RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 CENPAP49450 140 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 SMTNP53814 917 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 GJA9P57773 515 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 IQUBQ8NA54 791 aa4.82□□□□□ -1.64
SCN3A-209ENST00000639244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 MAGED1Q9Y5V3 778 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-209ENST00000639244 EIF3AQ14152 1382 aaKnown RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 PDLIM1O00151 329 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 ENPP1P22413 925 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 RAB27AP51159 221 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 CPXCR1Q8N123 301 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 POM121Q96HA1 1249 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 TCF7L2Q9NQB0 619 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 SQORQ9Y6N5 450 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 PTPRGP23470 1445 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 ATF7P17544 494 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 GRM1Q13255 1194 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 FAM9CQ8IZT9 166 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 AFAP1L1Q8TED9 768 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 ZNF148Q9UQR1 794 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 GMEB1Q9Y692 573 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 FESP07332 822 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 PARP1P09874 1014 aaKnown RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 PLCB4Q15147 1175 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 GRAMD4Q6IC98 578 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 BICDL1Q6ZP65 573 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 TRIM58Q8NG06 486 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 SMARCC2Q8TAQ2 1214 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 CHMP7Q8WUX9 453 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 FKBP14Q9NWM8 211 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 STK39Q9UEW8 545 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 MCM8Q9UJA3 840 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 GTPBP6O43824 516 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 USP11P51784 963 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 INHBEP58166 350 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 DAB2P98082 770 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 CEP85LQ5SZL2 805 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 DGLUCYQ7Z3D6 616 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 FERMT3Q86UX7 667 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 TXNDC2Q86VQ3 553 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 DDX42Q86XP3 938 aaKnown RBP eCLIP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 ZNF713Q8N859 430 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 CCT8P50990 548 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 PABPC4Q13310 644 aaKnown RBP eCLIP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 NFE2L1Q14494 772 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 EMC10Q5UCC4 262 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 GKAP1Q5VSY0 366 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-209ENST00000639244 PHLDB2Q86SQ0 1253 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 TOR1AIP2Q8NFQ8 470 aa4.81□□□□□ -1.64
SCN3A-209ENST00000639244 ASIC4Q96FT7 647 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms