RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 AFF2P51816 1311 aa24.91■■□□□ 1.58
CLN6-224ENST00000638076 WDHD1O75717 1129 aaPredicted RBP24.91■■□□□ 1.58
CLN6-224ENST00000638076 KIAA2012Q0VF49 1180 aa24.91■■□□□ 1.58
CLN6-224ENST00000638076 NBPF11Q86T75 865 aa24.91■■□□□ 1.58
CLN6-224ENST00000638076 LRRC4BQ9NT99 713 aa24.91■■□□□ 1.58
CLN6-224ENST00000638076 BAZ2AQ9UIF9 1905 aaKnown RBP24.91■■□□□ 1.58
CLN6-224ENST00000638076 SBF2Q86WG5 1849 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 PRDM1O75626 825 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 CRACR2BQ8N4Y2 399 aaPredicted RBP24.9■■□□□ 1.58
CLN6-224ENST00000638076 MYH13Q9UKX3 1938 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 USP17L12C9JPN9 530 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 USP17L21D6R901 530 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 CMA1P23946 247 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 IQCB1Q15051 598 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 SEPT12Q8IYM1 358 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 ENAHQ8N8S7 591 aaPredicted RBP24.9■■□□□ 1.58
CLN6-224ENST00000638076 CNBD1Q8NA66 436 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 ZSCAN10Q96SZ4 725 aaPredicted RBP24.9■■□□□ 1.58
CLN6-224ENST00000638076 MAP3K14Q99558 947 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 ANKIB1Q9P2G1 1089 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 IRS2Q9Y4H2 1338 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 DUOX1Q9NRD9 1551 aa24.9■■□□□ 1.58
CLN6-224ENST00000638076 A0A087WWV3 80 aa24.89■■□□□ 1.58
CLN6-224ENST00000638076 GRAPQ13588 217 aa24.89■■□□□ 1.58
CLN6-224ENST00000638076 SLC51AQ86UW1 340 aa24.89■■□□□ 1.58
CLN6-224ENST00000638076 GRAPLQ8TC17 118 aaPredicted RBP24.89■■□□□ 1.58
CLN6-224ENST00000638076 ONECUT3O60422 494 aaPredicted RBP24.89■■□□□ 1.57
CLN6-224ENST00000638076 DEXIO95424 95 aa24.89■■□□□ 1.57
CLN6-224ENST00000638076 MMP1P03956 469 aa24.89■■□□□ 1.57
CLN6-224ENST00000638076 PTPAQ15257 358 aa24.89■■□□□ 1.57
CLN6-224ENST00000638076 CRNKL1Q9BZJ0 848 aaKnown RBP24.89■■□□□ 1.57
CLN6-224ENST00000638076 ANO10Q9NW15 660 aa24.89■■□□□ 1.57
CLN6-224ENST00000638076 PPP6R2O75170 966 aa24.88■■□□□ 1.57
CLN6-224ENST00000638076 ZNF202O95125 648 aa24.88■■□□□ 1.57
CLN6-224ENST00000638076 FGRP09769 529 aa24.88■■□□□ 1.57
CLN6-224ENST00000638076 PCP11498 1178 aaKnown RBP24.88■■□□□ 1.57
CLN6-224ENST00000638076 PFKFB1P16118 471 aa24.88■■□□□ 1.57
CLN6-224ENST00000638076 TRIM5Q9C035 493 aa24.88■■□□□ 1.57
CLN6-224ENST00000638076 DCP1AQ9NPI6 582 aaPredicted RBP24.88■■□□□ 1.57
CLN6-224ENST00000638076 KCNJ14Q9UNX9 436 aa24.88■■□□□ 1.57
CLN6-224ENST00000638076 MROH7-TTC4A0A0A0MT08 1334 aa24.88■■□□□ 1.57
CLN6-224ENST00000638076 GOLGA6L6A8MZA4 724 aa24.87■■□□□ 1.57
CLN6-224ENST00000638076 BCL11BQ9C0K0 894 aaPredicted RBP24.87■■□□□ 1.57
CLN6-224ENST00000638076 BTBD18B2RXH4 712 aa24.87■■□□□ 1.57
CLN6-224ENST00000638076 GOLGA6L19H0YKK7 550 aa24.87■■□□□ 1.57
CLN6-224ENST00000638076 SAFBQ15424 915 aaKnown RBP eCLIP24.87■■□□□ 1.57
CLN6-224ENST00000638076 NOSTRINQ8IVI9 506 aa24.87■■□□□ 1.57
CLN6-224ENST00000638076 JMYQ8N9B5 988 aa24.87■■□□□ 1.57
CLN6-224ENST00000638076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.86■■□□□ 1.57
CLN6-224ENST00000638076 EVX2Q03828 476 aa24.86■■□□□ 1.57
CLN6-224ENST00000638076 IFIT1BQ5T764 474 aaKnown RBP24.86■■□□□ 1.57
CLN6-224ENST00000638076 IQCA1Q86XH1 822 aa24.86■■□□□ 1.57
CLN6-224ENST00000638076 PLA2G4DQ86XP0 818 aa24.86■■□□□ 1.57
CLN6-224ENST00000638076 DIS3L2Q8IYB7 885 aaKnown RBP24.86■■□□□ 1.57
CLN6-224ENST00000638076 ATP8A2Q9NTI2 1148 aa24.86■■□□□ 1.57
CLN6-224ENST00000638076 KIAA1468Q9P260 1216 aa24.86■■□□□ 1.57
CLN6-224ENST00000638076 MYH2Q9UKX2 1941 aa24.86■■□□□ 1.57
CLN6-224ENST00000638076 TPM3P06753 285 aa24.85■■□□□ 1.57
CLN6-224ENST00000638076 ZNF75DP51815 510 aa24.85■■□□□ 1.57
CLN6-224ENST00000638076 PPP2R5BQ15173 497 aa24.85■■□□□ 1.57
CLN6-224ENST00000638076 DZIP1Q86YF9 867 aaKnown RBP24.85■■□□□ 1.57
CLN6-224ENST00000638076 ADRA2BP18089 450 aa24.85■■□□□ 1.57
CLN6-224ENST00000638076 PIBF1Q8WXW3 757 aa24.85■■□□□ 1.57
CLN6-224ENST00000638076 TRPC5Q9UL62 973 aaPredicted RBP24.85■■□□□ 1.57
CLN6-224ENST00000638076 LEMD3Q9Y2U8 911 aa24.85■■□□□ 1.57
CLN6-224ENST00000638076 SPTY2D1Q68D10 685 aaPredicted RBP24.84■■□□□ 1.57
CLN6-224ENST00000638076 PRR5LQ6MZQ0 368 aa24.84■■□□□ 1.57
CLN6-224ENST00000638076 CATIPQ7Z7H3 387 aa24.84■■□□□ 1.57
CLN6-224ENST00000638076 FBXW7Q969H0 707 aa24.84■■□□□ 1.57
CLN6-224ENST00000638076 BECN2A8MW95 431 aa24.84■■□□□ 1.57
CLN6-224ENST00000638076 CEP57L1Q8IYX8 460 aa24.84■■□□□ 1.57
CLN6-224ENST00000638076 FOXP1Q9H334 677 aaPredicted RBP24.84■■□□□ 1.57
CLN6-224ENST00000638076 KCNF1Q9H3M0 494 aa24.84■■□□□ 1.57
CLN6-224ENST00000638076 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.84■■□□□ 1.577e-6■■■■■ 33.6
CLN6-224ENST00000638076 ZBTB22O15209 634 aa24.83■■□□□ 1.57
CLN6-224ENST00000638076 TMED8Q6PL24 325 aaPredicted RBP24.83■■□□□ 1.57
CLN6-224ENST00000638076 SHC4Q6S5L8 630 aa24.83■■□□□ 1.57
CLN6-224ENST00000638076 DHX40Q8IX18 779 aaKnown RBP24.83■■□□□ 1.57
CLN6-224ENST00000638076 RNF26Q9BY78 433 aaPredicted RBP24.83■■□□□ 1.57
CLN6-224ENST00000638076 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.83■■□□□ 1.57
CLN6-224ENST00000638076 SLC3A2P08195 630 aaKnown RBP24.83■■□□□ 1.56
CLN6-224ENST00000638076 DRC7Q8IY82 874 aa24.83■■□□□ 1.56
CLN6-224ENST00000638076 XDHP47989 1333 aa24.82■■□□□ 1.56
CLN6-224ENST00000638076 MAST2Q6P0Q8 1798 aa24.82■■□□□ 1.56
CLN6-224ENST00000638076 SYKP43405 635 aa24.82■■□□□ 1.56
CLN6-224ENST00000638076 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.82■■□□□ 1.56
CLN6-224ENST00000638076 CLIC6Q96NY7 704 aa24.82■■□□□ 1.56
CLN6-224ENST00000638076 ARPP21Q9UBL0 812 aaPredicted RBP24.82■■□□□ 1.56
CLN6-224ENST00000638076 HPSEQ9Y251 543 aa24.82■■□□□ 1.56
CLN6-224ENST00000638076 ORC4O43929 436 aa24.81■■□□□ 1.56
CLN6-224ENST00000638076 CYP2D6P10635 497 aa24.81■■□□□ 1.56
CLN6-224ENST00000638076 TOB1P50616 345 aaPredicted RBP24.81■■□□□ 1.56
CLN6-224ENST00000638076 AKAP17AQ02040 695 aaKnown RBP24.81■■□□□ 1.56
CLN6-224ENST00000638076 ZRSR1Q15695 479 aaKnown RBP24.81■■□□□ 1.56
CLN6-224ENST00000638076 WDR66Q8TBY9 1149 aa24.81■■□□□ 1.56
CLN6-224ENST00000638076 RPGRQ92834 1020 aaKnown RBP24.81■■□□□ 1.56
CLN6-224ENST00000638076 NAT10Q9H0A0 1025 aaKnown RBP24.81■■□□□ 1.56
CLN6-224ENST00000638076 CCDC88AQ3V6T2 1871 aa24.81■■□□□ 1.56
CLN6-224ENST00000638076 HSPA1LP34931 641 aa24.81■■□□□ 1.56
CLN6-224ENST00000638076 NR5A1Q13285 461 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms