RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 IRF6O14896 467 aa17.39■□□□□ 0.37
CACNA1A-249ENST00000637777 POLR3DP05423 398 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-249ENST00000637777 CETPP11597 493 aa17.39■□□□□ 0.37
CACNA1A-249ENST00000637777 ADD2P35612 726 aa17.39■□□□□ 0.37
CACNA1A-249ENST00000637777 NOL9Q5SY16 702 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-249ENST00000637777 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-249ENST00000637777 DDRGK1Q96HY6 314 aa17.39■□□□□ 0.37
CACNA1A-249ENST00000637777 ARMT1Q9H993 441 aa17.39■□□□□ 0.37
CACNA1A-249ENST00000637777 HERC5Q9UII4 1024 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-249ENST00000637777 LAMB1P07942 1786 aa17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 ATAD5Q96QE3 1844 aa17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 TBC1D12O60347 775 aa17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 CTNND1O60716 968 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 GLRX3O76003 335 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 MBD4O95243 580 aa17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 LRRFIP1Q32MZ4 808 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 SLFNL1Q499Z3 407 aa17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 LCORLQ8N3X6 602 aa17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 BRI3BPQ8WY22 251 aa17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 LNPKQ9C0E8 428 aa17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 ZHX2Q9Y6X8 837 aa17.38■□□□□ 0.37
CACNA1A-249ENST00000637777 TCRBV5S4A2TA0A5A2 114 aa17.37■□□□□ 0.37
CACNA1A-249ENST00000637777 PHF20L1A8MW92 1017 aa17.37■□□□□ 0.37
CACNA1A-249ENST00000637777 CAPN15O75808 1086 aa17.37■□□□□ 0.37
CACNA1A-249ENST00000637777 TAF1CQ15572 869 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-249ENST00000637777 AMOTL1Q8IY63 956 aa17.37■□□□□ 0.37
CACNA1A-249ENST00000637777 RIOK1Q9BRS2 568 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-249ENST00000637777 FSD1Q9BTV5 496 aa17.37■□□□□ 0.37
CACNA1A-249ENST00000637777 TRIM75PA6NK02 468 aa17.36■□□□□ 0.37
CACNA1A-249ENST00000637777 GADL1Q6ZQY3 521 aa17.36■□□□□ 0.37
CACNA1A-249ENST00000637777 TTC6Q86TZ1 520 aa17.36■□□□□ 0.37
CACNA1A-249ENST00000637777 KBTBD3Q8NAB2 608 aa17.36■□□□□ 0.37
CACNA1A-249ENST00000637777 SDR42E1Q8WUS8 393 aa17.36■□□□□ 0.37
CACNA1A-249ENST00000637777 MS4A4AQ96JQ5 239 aa17.36■□□□□ 0.37
CACNA1A-249ENST00000637777 MCM9Q9NXL9 1143 aa17.36■□□□□ 0.37
CACNA1A-249ENST00000637777 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-249ENST00000637777 SIPA1L1O43166 1804 aa17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 GPR25O00155 361 aa17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 PTPRAP18433 802 aa17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 CRHR2Q13324 411 aa17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 DGKZQ13574 1117 aa17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 UBE3CQ15386 1083 aa17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 CCDC84Q86UT8 332 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 FOXP4Q8IVH2 680 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 ZNF296Q8WUU4 475 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 PTPN18Q99952 460 aa17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 ZFYVE28Q9HCC9 887 aa17.35■□□□□ 0.37
CACNA1A-249ENST00000637777 TESPA1A2RU30 521 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-249ENST00000637777 GDF11O95390 407 aa17.34■□□□□ 0.37
CACNA1A-249ENST00000637777 IGHDP01880 384 aa17.34■□□□□ 0.37
CACNA1A-249ENST00000637777 CHGBP05060 677 aa17.34■□□□□ 0.37
CACNA1A-249ENST00000637777 CAP2P40123 477 aa17.34■□□□□ 0.37
CACNA1A-249ENST00000637777 MAP3K10Q02779 954 aa17.34■□□□□ 0.37
CACNA1A-249ENST00000637777 FAM43AQ8N2R8 423 aa17.34■□□□□ 0.37
CACNA1A-249ENST00000637777 PI4K2BQ8TCG2 481 aa17.34■□□□□ 0.37
CACNA1A-249ENST00000637777 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
CACNA1A-249ENST00000637777 SLC4A4Q9Y6R1 1079 aa17.34■□□□□ 0.37
CACNA1A-249ENST00000637777 BAZ2AQ9UIF9 1905 aaKnown RBP17.33■□□□□ 0.37
CACNA1A-249ENST00000637777 BTBD19C9JJ37 291 aa17.33■□□□□ 0.36
CACNA1A-249ENST00000637777 RNF113AO15541 343 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-249ENST00000637777 FKTNO75072 461 aa17.33■□□□□ 0.36
CACNA1A-249ENST00000637777 ZFYP08048 801 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-249ENST00000637777 R3HDMLQ9H3Y0 253 aa17.33■□□□□ 0.36
CACNA1A-249ENST00000637777 AS3MTQ9HBK9 375 aa17.33■□□□□ 0.36
CACNA1A-249ENST00000637777 MYH8P13535 1937 aa17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 CXCL11O14625 94 aa17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 PRKAB2O43741 272 aa17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 ASNSP08243 561 aa17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 CHD1LQ86WJ1 897 aa17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 SMC5Q8IY18 1101 aa17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 APPBP2Q92624 585 aa17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 PUS7LQ9H0K6 701 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 DCP1AQ9NPI6 582 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 KCNH4Q9UQ05 1017 aa17.32■□□□□ 0.36
CACNA1A-249ENST00000637777 USP17L5A8MUK1 530 aa17.31■□□□□ 0.36
CACNA1A-249ENST00000637777 PDHXO00330 501 aa17.31■□□□□ 0.36
CACNA1A-249ENST00000637777 PDE1AP54750 535 aa17.31■□□□□ 0.36
CACNA1A-249ENST00000637777 FASTKD5Q7L8L6 764 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-249ENST00000637777 DNAJC18Q9H819 358 aa17.31■□□□□ 0.36
CACNA1A-249ENST00000637777 ATP8A2Q9NTI2 1148 aa17.31■□□□□ 0.36
CACNA1A-249ENST00000637777 AFG3L2Q9Y4W6 797 aa17.31■□□□□ 0.36
CACNA1A-249ENST00000637777 PHIPQ8WWQ0 1821 aa17.31■□□□□ 0.36
CACNA1A-249ENST00000637777 DDX60LQ5H9U9 1706 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 MPHOSPH10O00566 681 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 APPP05067 770 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 PLCD1P51178 756 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 SPP2Q13103 211 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 CERKLQ49MI3 558 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 CTU1Q7Z7A3 348 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 ANKRD23Q86SG2 305 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 ZNF280CQ8ND82 737 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 CFHR5Q9BXR6 569 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 MCOLN1Q9GZU1 580 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 EHD4Q9H223 541 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 CABP5Q9NP86 173 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 ZBTB21Q9ULJ3 1066 aa17.3■□□□□ 0.36
CACNA1A-249ENST00000637777 PTPRFP10586 1907 aa17.29■□□□□ 0.36
CACNA1A-249ENST00000637777 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms