RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 FSD2A1L4K1 749 aa25.31■■□□□ 1.64
CHRNA7-228ENST00000637519 GOLGA6L3A6NEY3 463 aa25.31■■□□□ 1.64
CHRNA7-228ENST00000637519 MBD3O95983 291 aa25.31■■□□□ 1.64
CHRNA7-228ENST00000637519 SBK1Q52WX2 424 aa25.31■■□□□ 1.64
CHRNA7-228ENST00000637519 NUP133Q8WUM0 1156 aa25.31■■□□□ 1.64
CHRNA7-228ENST00000637519 ZSCAN10Q96SZ4 725 aaPredicted RBP25.31■■□□□ 1.64
CHRNA7-228ENST00000637519 GPR75-ASB3A0A0A6YYF3 556 aa25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 G3V3G9 751 aa25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 NTRK3Q16288 839 aa25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 DCAF8Q5TAQ9 597 aa25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 CMTR1Q8N1G2 835 aaKnown RBP25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 CHMP4CQ96CF2 233 aa25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 C12orf60Q5U649 245 aa25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 ZNF654Q8IZM8 581 aa25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 FTOQ9C0B1 505 aaKnown RBP eCLIP25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 DAGLAQ9Y4D2 1042 aa25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 NAV1Q8NEY1 1877 aa25.3■■□□□ 1.64
CHRNA7-228ENST00000637519 RHBDL3P58872 404 aa25.29■■□□□ 1.64
CHRNA7-228ENST00000637519 TEX11Q8IYF3 940 aa25.29■■□□□ 1.64
CHRNA7-228ENST00000637519 SLC44A5Q8NCS7 719 aa25.29■■□□□ 1.64
CHRNA7-228ENST00000637519 C8orf76Q96K31 380 aa25.29■■□□□ 1.64
CHRNA7-228ENST00000637519 GAKO14976 1311 aa25.29■■□□□ 1.64
CHRNA7-228ENST00000637519 PLCD1P51178 756 aa25.28■■□□□ 1.64
CHRNA7-228ENST00000637519 SYNE3Q6ZMZ3 975 aa25.28■■□□□ 1.64
CHRNA7-228ENST00000637519 ILDR1Q86SU0 546 aaPredicted RBP25.28■■□□□ 1.64
CHRNA7-228ENST00000637519 CCDC82Q8N4S0 544 aa25.28■■□□□ 1.64
CHRNA7-228ENST00000637519 ADAMTSL1Q8N6G6 1762 aa25.28■■□□□ 1.64
CHRNA7-228ENST00000637519 SCNN1DP51172 638 aa25.28■■□□□ 1.64
CHRNA7-228ENST00000637519 CNKSR1Q969H4 720 aa25.28■■□□□ 1.64
CHRNA7-228ENST00000637519 EYA3Q99504 573 aa25.28■■□□□ 1.64
CHRNA7-228ENST00000637519 IGSF3O75054 1194 aa25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 UBE2HP62256 183 aa25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 CEBPZQ03701 1054 aaKnown RBP25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 RTN1Q16799 776 aa25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 TTF2Q9UNY4 1162 aaKnown RBP25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 CDK5RAP2Q96SN8 1893 aa25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 C10orf71Q711Q0 1435 aa25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 ECM29Q5VYK3 1845 aa25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 ORC4O43929 436 aa25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 C7orf43Q8WVR3 580 aa25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 ZSCAN16Q9H4T2 348 aaPredicted RBP25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 FLT1P17948 1338 aa25.27■■□□□ 1.64
CHRNA7-228ENST00000637519 SLC3A2P08195 630 aaKnown RBP25.26■■□□□ 1.63
CHRNA7-228ENST00000637519 IFIT1BQ5T764 474 aaKnown RBP25.26■■□□□ 1.63
CHRNA7-228ENST00000637519 IQCA1Q86XH1 822 aa25.26■■□□□ 1.63
CHRNA7-228ENST00000637519 ALG1Q9BT22 464 aa25.26■■□□□ 1.63
CHRNA7-228ENST00000637519 MTA3Q9BTC8 594 aa25.26■■□□□ 1.63
CHRNA7-228ENST00000637519 SLC26A6Q9BXS9 759 aa25.26■■□□□ 1.63
CHRNA7-228ENST00000637519 C21orf2O43822 256 aa25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 PCP11498 1178 aaKnown RBP25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 IARSP41252 1262 aaKnown RBP25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 PDE4BQ07343 736 aa25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 AOC3Q16853 763 aa25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 LEO1Q8WVC0 666 aaPredicted RBP25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 NID2Q14112 1375 aa25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 CDKL5O76039 1030 aa25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 CPLX2Q6PUV4 134 aaKnown RBP25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 FBXO18Q8NFZ0 1043 aa25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 FAM163AQ96GL9 167 aaPredicted RBP25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 SPATA32Q96LK8 384 aa25.25■■□□□ 1.63
CHRNA7-228ENST00000637519 SYCE3A1L190 88 aa25.24■■□□□ 1.63
CHRNA7-228ENST00000637519 TSPY2A6NKD2 308 aa25.24■■□□□ 1.63
CHRNA7-228ENST00000637519 POLR3DP05423 398 aaPredicted RBP25.24■■□□□ 1.63
CHRNA7-228ENST00000637519 GUCY1A2P33402 732 aa25.24■■□□□ 1.63
CHRNA7-228ENST00000637519 KIF28PB7ZC32 967 aa25.24■■□□□ 1.63
CHRNA7-228ENST00000637519 ECE2O60344 883 aa25.24■■□□□ 1.63
CHRNA7-228ENST00000637519 CSPP1Q1MSJ5 1256 aa25.24■■□□□ 1.63
CHRNA7-228ENST00000637519 SLF2Q8IX21 1173 aa25.24■■□□□ 1.63
CHRNA7-228ENST00000637519 TMTC2Q8N394 836 aa25.24■■□□□ 1.63
CHRNA7-228ENST00000637519 SNED1Q8TER0 1413 aa25.23■■□□□ 1.63
CHRNA7-228ENST00000637519 DDX60LQ5H9U9 1706 aaKnown RBP25.23■■□□□ 1.63
CHRNA7-228ENST00000637519 PICALMQ13492 652 aa25.23■■□□□ 1.63
CHRNA7-228ENST00000637519 FANCBQ8NB91 859 aa25.23■■□□□ 1.63
CHRNA7-228ENST00000637519 ROBO3Q96MS0 1386 aa25.23■■□□□ 1.63
CHRNA7-228ENST00000637519 SCN9AQ15858 1988 aa25.22■■□□□ 1.63
CHRNA7-228ENST00000637519 PCDHAC2Q9Y5I4 1007 aa25.22■■□□□ 1.63
CHRNA7-228ENST00000637519 ZBTB7AO95365 584 aa25.22■■□□□ 1.63
CHRNA7-228ENST00000637519 ZNF445P59923 1031 aa25.22■■□□□ 1.63
CHRNA7-228ENST00000637519 TFAP4Q01664 338 aa25.22■■□□□ 1.63
CHRNA7-228ENST00000637519 SCAND2PQ9GZW5 306 aaPredicted RBP25.22■■□□□ 1.63
CHRNA7-228ENST00000637519 FMNL1O95466 1100 aaPredicted RBP25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 XRCC6P12956 609 aaKnown RBP eCLIP25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 IFNAR1P17181 557 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 SSRP1Q08945 709 aaKnown RBP25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 AMOTL1Q8IY63 956 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 USP28Q96RU2 1077 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 MYH15Q9Y2K3 1946 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 DLEC1Q9Y238 1755 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 PLCG2P16885 1265 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 PODNQ7Z5L7 613 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 NBPF11Q86T75 865 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 KIAA0825Q8IV33 1275 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 PANK2Q9BZ23 570 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 MKNK2Q9HBH9 465 aa25.21■■□□□ 1.63
CHRNA7-228ENST00000637519 ELP1O95163 1332 aa25.2■■□□□ 1.62
CHRNA7-228ENST00000637519 USP17L3A6NCW0 530 aa25.2■■□□□ 1.62
CHRNA7-228ENST00000637519 USP17L4A6NCW7 530 aa25.2■■□□□ 1.62
CHRNA7-228ENST00000637519 DPEP1P16444 411 aa25.2■■□□□ 1.62
CHRNA7-228ENST00000637519 KRT40Q6A162 431 aa25.2■■□□□ 1.62
CHRNA7-228ENST00000637519 USP17L1Q7RTZ2 530 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms