RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 FAM217BQ9NTX9 383 aaPredicted RBP16.01■□□□□ 0.15
SMARCA2-254ENST00000636903 MTMR7Q9Y216 660 aa16.01■□□□□ 0.15
SMARCA2-254ENST00000636903 SNED1Q8TER0 1413 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 FLT1P17948 1338 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 FIBPO43427 364 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 POLR3DP05423 398 aaPredicted RBP16■□□□□ 0.15
SMARCA2-254ENST00000636903 LDHCP07864 332 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 RBM5P52756 815 aaKnown RBP eCLIP16■□□□□ 0.15
SMARCA2-254ENST00000636903 PPP4CP60510 307 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 NFIAQ12857 509 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 WTAPQ15007 396 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 C12orf60Q5U649 245 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 SLC12A7Q9Y666 1083 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 hCG_1642624A0A1W2PR95 340 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 CCDC69A6NI79 296 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 CPLX1O14810 134 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 ZBTB43O43298 467 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 PODNQ7Z5L7 613 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 FBXL16Q8N461 479 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 ESR2Q92731 530 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 RNF41Q9H4P4 317 aaPredicted RBP16■□□□□ 0.15
SMARCA2-254ENST00000636903 TFIP11Q9UBB9 837 aaKnown RBP16■□□□□ 0.15
SMARCA2-254ENST00000636903 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
SMARCA2-254ENST00000636903 COL4A5P29400 1685 aa16■□□□□ 0.15
SMARCA2-254ENST00000636903 TIAM2Q8IVF5 1701 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 USP17L3A6NCW0 530 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 USP17L4A6NCW7 530 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 KIAA2012Q0VF49 1180 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 DACT2Q5SW24 774 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 USP17L1Q7RTZ2 530 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 CCDC125Q86Z20 511 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 ZFPM1Q8IX07 1006 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 TMEM87BQ96K49 555 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 GAKO14976 1311 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 GOLGA8AA7E2F4 631 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 TCP10Q12799 353 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 GIMAP6Q6P9H5 292 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 RASGRP2Q7LDG7 609 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 GPT2Q8TD30 523 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 FTOQ9C0B1 505 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 RBM27Q9P2N5 1060 aaKnown RBP15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 ARPP21Q9UBL0 812 aaPredicted RBP15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 DDX49Q9Y6V7 483 aaKnown RBP15.99■□□□□ 0.15
SMARCA2-254ENST00000636903 CDK5RAP2Q96SN8 1893 aa15.98■□□□□ 0.15
SMARCA2-254ENST00000636903 H3BQV1 296 aa15.98■□□□□ 0.15
SMARCA2-254ENST00000636903 PTMSP20962 102 aa15.98■□□□□ 0.15
SMARCA2-254ENST00000636903 SEC23AQ15436 765 aa15.98■□□□□ 0.15
SMARCA2-254ENST00000636903 IFFO2Q5TF58 517 aa15.98■□□□□ 0.15
SMARCA2-254ENST00000636903 APOBEC3HQ6NTF7 200 aaKnown RBP15.98■□□□□ 0.15
SMARCA2-254ENST00000636903 USP48Q86UV5 1035 aa15.98■□□□□ 0.15
SMARCA2-254ENST00000636903 USP40Q9NVE5 1235 aa15.98■□□□□ 0.15
SMARCA2-254ENST00000636903 ORC3Q9UBD5 711 aaPredicted RBP15.98■□□□□ 0.15
SMARCA2-254ENST00000636903 KIAA1551Q9HCM1 1747 aa15.98■□□□□ 0.15
SMARCA2-254ENST00000636903 TSPY2A6NKD2 308 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 WDHD1O75717 1129 aaPredicted RBP15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 ZSCAN10Q96SZ4 725 aaPredicted RBP15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 SCAF8Q9UPN6 1271 aaKnown RBP15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 WDR19Q8NEZ3 1342 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 FAM196BA6NMK8 535 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 POLD1P28340 1107 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 GUCY1A2P33402 732 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 CRKP46108 304 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 TFAP4Q01664 338 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 CEBPZQ03701 1054 aaKnown RBP15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 CDC42EP5Q6NZY7 148 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 SGMS1Q86VZ5 419 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 LARGE2Q8N3Y3 721 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 NLGN2Q8NFZ4 835 aa15.97■□□□□ 0.15
SMARCA2-254ENST00000636903 ERICH2A1L162 156 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 LIFRP42702 1097 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 CCDC93Q567U6 631 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 ZNF654Q8IZM8 581 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 PIBF1Q8WXW3 757 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 MKNK2Q9HBH9 465 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 IL17RBQ9NRM6 502 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 SART3Q15020 963 aaKnown RBP15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 SBK1Q52WX2 424 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 CLEC10AQ8IUN9 316 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 FAM163AQ96GL9 167 aaPredicted RBP15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 PIM2Q9P1W9 311 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 BCS1LQ9Y276 419 aa15.96■□□□□ 0.15
SMARCA2-254ENST00000636903 ZBTB22O15209 634 aa15.95■□□□□ 0.14
SMARCA2-254ENST00000636903 NTRK3Q16288 839 aa15.95■□□□□ 0.14
SMARCA2-254ENST00000636903 IFIT1BQ5T764 474 aaKnown RBP15.95■□□□□ 0.14
SMARCA2-254ENST00000636903 STRIP1Q5VSL9 837 aa15.95■□□□□ 0.14
SMARCA2-254ENST00000636903 TEKT1Q969V4 418 aa15.95■□□□□ 0.14
SMARCA2-254ENST00000636903 LLPHQ9BRT6 129 aaKnown RBP15.95■□□□□ 0.14
SMARCA2-254ENST00000636903 SHTN1A0MZ66 631 aa15.95■□□□□ 0.14
SMARCA2-254ENST00000636903 FGRP09769 529 aa15.95■□□□□ 0.14
SMARCA2-254ENST00000636903 PDE4BQ07343 736 aa15.95■□□□□ 0.14
SMARCA2-254ENST00000636903 SLC26A6Q9BXS9 759 aa15.95■□□□□ 0.14
SMARCA2-254ENST00000636903 PSMD14O00487 310 aa15.94■□□□□ 0.14
SMARCA2-254ENST00000636903 PDCP20941 246 aa15.94■□□□□ 0.14
SMARCA2-254ENST00000636903 SHROOM1Q2M3G4 852 aaPredicted RBP15.94■□□□□ 0.14
SMARCA2-254ENST00000636903 CAVIN1Q6NZI2 390 aaKnown RBP15.94■□□□□ 0.14
SMARCA2-254ENST00000636903 PTGER2P43116 358 aa15.94■□□□□ 0.14
SMARCA2-254ENST00000636903 RCSD1Q6JBY9 416 aa15.94■□□□□ 0.14
SMARCA2-254ENST00000636903 IQCA1Q86XH1 822 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms