RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 SLURP2P0DP57 97 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 CCL5P13501 91 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 GJA8P48165 433 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 SMCR8Q8TEV9 937 aaPredicted RBP15.43■□□□□ 0.06
CTSD-208ENST00000636843 SHISA4Q96DD7 197 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 COL2A1P02458 1487 aaPredicted RBP15.43■□□□□ 0.06
CTSD-208ENST00000636843 MCAMP43121 646 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 ZKSCAN2Q63HK3 967 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 PROCA1Q8NCQ7 364 aaPredicted RBP15.43■□□□□ 0.06
CTSD-208ENST00000636843 CLUAP1Q96AJ1 413 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 RNF208Q9H0X6 261 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 GPR108Q9NPR9 543 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 LRP2BPQ9P2M1 347 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 PNMA3Q9UL41 463 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 GABRQQ9UN88 632 aa15.43■□□□□ 0.06
CTSD-208ENST00000636843 ADCY3O60266 1144 aa15.42■□□□□ 0.06
CTSD-208ENST00000636843 TEX11Q8IYF3 940 aa15.42■□□□□ 0.06
CTSD-208ENST00000636843 NOL10Q9BSC4 688 aaKnown RBP15.42■□□□□ 0.06
CTSD-208ENST00000636843 TNNQ9UQP3 1299 aa15.42■□□□□ 0.06
CTSD-208ENST00000636843 FAM196BA6NMK8 535 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 H0YGN5 161 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 TNPO2O14787 897 aaKnown RBP15.41■□□□□ 0.06
CTSD-208ENST00000636843 CAPN2P17655 700 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 CAP2P40123 477 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 FLT3LGP49771 235 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 IRF5Q13568 498 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 POLA2Q14181 598 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 ZNF280CQ8ND82 737 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 PANK1Q8TE04 598 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 PXYLP1Q8TE99 480 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.41■□□□□ 0.06
CTSD-208ENST00000636843 HERC5Q9UII4 1024 aaKnown RBP15.41■□□□□ 0.06
CTSD-208ENST00000636843 DOCK1Q14185 1865 aa15.41■□□□□ 0.06
CTSD-208ENST00000636843 IGSF3O75054 1194 aa15.4■□□□□ 0.06
CTSD-208ENST00000636843 BAG3O95817 575 aa15.4■□□□□ 0.06
CTSD-208ENST00000636843 PLCG2P16885 1265 aa15.4■□□□□ 0.06
CTSD-208ENST00000636843 SPP2Q13103 211 aa15.4■□□□□ 0.06
CTSD-208ENST00000636843 PABPC4Q13310 644 aaKnown RBP eCLIP15.4■□□□□ 0.062e-14■■■□□ 16.1
CTSD-208ENST00000636843 FAM110CQ1W6H9 321 aa15.4■□□□□ 0.06
CTSD-208ENST00000636843 CCDC158Q5M9N0 1113 aa15.4■□□□□ 0.06
CTSD-208ENST00000636843 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
CTSD-208ENST00000636843 UBE2Q1Q7Z7E8 422 aa15.4■□□□□ 0.06
CTSD-208ENST00000636843 CCDC84Q86UT8 332 aaPredicted RBP15.4■□□□□ 0.06
CTSD-208ENST00000636843 TMEM57Q8N5G2 664 aa15.4■□□□□ 0.06
CTSD-208ENST00000636843 DHX36Q9H2U1 1008 aaKnown RBP15.4■□□□□ 0.06
CTSD-208ENST00000636843 COLQQ9Y215 455 aaPredicted RBP15.4■□□□□ 0.06
CTSD-208ENST00000636843 COG6Q9Y2V7 657 aa15.4■□□□□ 0.06
CTSD-208ENST00000636843 USP17L5A8MUK1 530 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 GCLCP48506 637 aaPredicted RBP15.39■□□□□ 0.05
CTSD-208ENST00000636843 FXR1P51114 621 aaKnown RBP eCLIP15.39■□□□□ 0.05
CTSD-208ENST00000636843 ATP8B2P98198 1209 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 TREML2Q5T2D2 321 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 NAA16Q6N069 864 aaPredicted RBP15.39■□□□□ 0.05
CTSD-208ENST00000636843 ANKRD13CQ8N6S4 541 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 SSH3Q8TE77 659 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 SH3RF3Q8TEJ3 882 aaPredicted RBP15.39■□□□□ 0.05
CTSD-208ENST00000636843 DPF3Q92784 378 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 COA7Q96BR5 231 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 HTATIP2Q9BUP3 242 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 PI4KBQ9UBF8 816 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 PHIPQ8WWQ0 1821 aa15.39■□□□□ 0.05
CTSD-208ENST00000636843 CEP290O15078 2479 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 PPP4CP60510 307 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 OS9Q13438 667 aaPredicted RBP15.38■□□□□ 0.05
CTSD-208ENST00000636843 SH3D19Q5HYK7 790 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 U2AF1L4Q8WU68 220 aaKnown RBP15.38■□□□□ 0.05
CTSD-208ENST00000636843 ZNF512BQ96KM6 892 aaPredicted RBP15.38■□□□□ 0.05
CTSD-208ENST00000636843 UNC93B1Q9H1C4 597 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 AS3MTQ9HBK9 375 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 PTPRFP10586 1907 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 SGPL1O95470 568 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 INHAP05111 366 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 ELNP15502 786 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 HMGCS2P54868 508 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 FTSJ3Q8IY81 847 aaKnown RBP15.38■□□□□ 0.05
CTSD-208ENST00000636843 DBNDD2Q9BQY9 259 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 SNRKQ9NRH2 765 aa15.38■□□□□ 0.05
CTSD-208ENST00000636843 MGAMO43451 1857 aa15.37■□□□□ 0.05
CTSD-208ENST00000636843 FARP2O94887 1054 aaPredicted RBP15.37■□□□□ 0.05
CTSD-208ENST00000636843 RRP1BQ14684 758 aaKnown RBP15.37■□□□□ 0.05
CTSD-208ENST00000636843 FOXP4Q8IVH2 680 aaPredicted RBP15.37■□□□□ 0.05
CTSD-208ENST00000636843 WDR18Q9BV38 432 aa15.37■□□□□ 0.05
CTSD-208ENST00000636843 AATFQ9NY61 560 aaKnown RBP eCLIP15.37■□□□□ 0.05
CTSD-208ENST00000636843 SURF6O75683 361 aaKnown RBP15.36■□□□□ 0.05
CTSD-208ENST00000636843 CYP2E1P05181 493 aaPredicted RBP15.36■□□□□ 0.05
CTSD-208ENST00000636843 ASNSP08243 561 aa15.36■□□□□ 0.05
CTSD-208ENST00000636843 RLBP1P12271 317 aa15.36■□□□□ 0.05
CTSD-208ENST00000636843 METTL16Q86W50 562 aaKnown RBP15.36■□□□□ 0.05
CTSD-208ENST00000636843 TGFBRAP1Q8WUH2 860 aa15.36■□□□□ 0.05
CTSD-208ENST00000636843 ASCC2Q9H1I8 757 aaPredicted RBP15.36■□□□□ 0.05
CTSD-208ENST00000636843 GINM1Q9NU53 330 aa15.36■□□□□ 0.05
CTSD-208ENST00000636843 NOP58Q9Y2X3 529 aaKnown RBP15.36■□□□□ 0.05
CTSD-208ENST00000636843 NR2E3Q9Y5X4 410 aa15.36■□□□□ 0.05
CTSD-208ENST00000636843 PAK6Q9NQU5 681 aaPredicted RBP15.35■□□□□ 0.05
CTSD-208ENST00000636843 TAOK2Q9UL54 1235 aa15.35■□□□□ 0.05
CTSD-208ENST00000636843 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
CTSD-208ENST00000636843 ZAP70P43403 619 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms