RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 LZTFL1Q9NQ48 299 aa9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 SETD1BQ9UPS6 1966 aaKnown RBP9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 ESYT2A0FGR8 921 aa9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 ARHGEF6Q15052 776 aa9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 ABCC1P33527 1531 aa9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 SPDYE2BA6NHP3 402 aa9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 PPP1R12AO14974 1030 aaPredicted RBP9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 SPDYE6P0CI01 402 aa9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 GTF2F1P35269 517 aaKnown RBP eCLIP9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 SCYL2Q6P3W7 929 aa9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 WDR66Q8TBY9 1149 aa9.92□□□□□ -0.82
CHRNA7-219ENST00000636709 MFSD14BQ5SR56 506 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 MRPS27Q92552 414 aaKnown RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 NAP1L4Q99733 375 aaKnown RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 MKRN1Q9UHC7 482 aaKnown RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 ZSCAN22P10073 491 aaPredicted RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 MYL10Q9BUA6 226 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 SH3TC1Q8TE82 1336 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 SPTLC2O15270 562 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 HOXC9P31274 260 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 LIN9Q5TKA1 542 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 RPUSD2Q8IZ73 545 aaKnown RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 IPO4Q8TEX9 1081 aaKnown RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 MYO1AQ9UBC5 1043 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 UBE2HP62256 183 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 DNM1Q05193 864 aaKnown RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 TBC1D10BQ4KMP7 808 aaPredicted RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 XAGE2Q96GT9 111 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 NSRP1Q9H0G5 558 aaKnown RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 C14orf93Q9H972 538 aaKnown RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 HAUS2Q9NVX0 235 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 YTHDC2Q9H6S0 1430 aaKnown RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 KCNQ4P56696 695 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 DEPTORQ8TB45 409 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 NOX5Q96PH1 765 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 DNAJC25Q9H1X3 360 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 HGSO14964 777 aaPredicted RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 FLOT1O75955 427 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 FAM160A1Q05DH4 1040 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 ATRIPQ8WXE1 791 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 TEKT1Q969V4 418 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 RPS6KC1Q96S38 1066 aa9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 BZW2Q9Y6E2 419 aaKnown RBP9.91□□□□□ -0.82
CHRNA7-219ENST00000636709 TNFAIP1Q13829 316 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 KIAA1841Q6NSI8 718 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 NELFCDQ8IXH7 590 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 CCDC110Q8TBZ0 833 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 V9GY48 417 aaPredicted RBP9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 UBN2Q6ZU65 1347 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 DISP3Q9P2K9 1392 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 CTAGE9A4FU28 777 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 ADCY7P51828 1080 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 HAUS3Q68CZ6 603 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 SEPT14Q6ZU15 432 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 TMX3Q96JJ7 454 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 NOC4LQ9BVI4 516 aaKnown RBP9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 ANKFY1Q9P2R3 1169 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 AKT3Q9Y243 479 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 SYT1P21579 422 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 CALCRLQ16602 461 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 DAAM2Q86T65 1068 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 TACC3Q9Y6A5 838 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 KIAA0586Q9BVV6 1533 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 MCM6Q14566 821 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 CCDC171Q6TFL3 1326 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 ASXL2Q76L83 1435 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 PARP10Q53GL7 1025 aa9.9□□□□□ -0.82
CHRNA7-219ENST00000636709 SCAF11Q99590 1463 aaKnown RBP9.9□□□□□ -0.83
CHRNA7-219ENST00000636709 POTEB2H3BUK9 544 aa9.9□□□□□ -0.83
CHRNA7-219ENST00000636709 LRRC47Q8N1G4 583 aaKnown RBP9.9□□□□□ -0.83
CHRNA7-219ENST00000636709 THRAP3Q9Y2W1 955 aaKnown RBP9.9□□□□□ -0.83
CHRNA7-219ENST00000636709 DKC1O60832 514 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 XPAP23025 273 aaPredicted RBP9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 AP5M1Q9H0R1 490 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 SLAIN2Q9P270 581 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 MTUS1Q9ULD2 1270 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 PABPC4Q13310 644 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 ALDH1L1O75891 902 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 CREB3L3Q68CJ9 461 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 FMNL3Q8IVF7 1028 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 FTOQ9C0B1 505 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 STIM2Q9P246 746 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 DNAI1Q9UI46 699 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 SAT1P21673 171 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 PDE1AP54750 535 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 SF3A3Q12874 501 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 ARHGAP44Q17R89 818 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 SPICE1Q8N0Z3 855 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 EYA1Q99502 592 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 DNM3Q9UQ16 869 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 PLEKHG3A1L390 1219 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 BNIP3LO60238 219 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 FMNL1O95466 1100 aaPredicted RBP9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 ZNF790Q6PG37 636 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 EEPD1Q7L9B9 569 aa9.89□□□□□ -0.83
CHRNA7-219ENST00000636709 KRT81Q14533 505 aa9.88□□□□□ -0.83
CHRNA7-219ENST00000636709 OTUD6AQ7L8S5 288 aa9.88□□□□□ -0.83
CHRNA7-219ENST00000636709 MIER3Q7Z3K6 550 aa9.88□□□□□ -0.83
CHRNA7-219ENST00000636709 SNX29Q8TEQ0 813 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms