RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 MTRQ99707 1265 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 ZNF408Q9H9D4 720 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 FANCLQ9NW38 375 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 SAGE1Q9NXZ1 904 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 TLL2Q9Y6L7 1015 aa4.88□□□□□ -1.63
CLN5-214ENST00000636705 GNAT3A8MTJ3 354 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 DIAPH1O60610 1272 aaKnown RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 NPR3P17342 541 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 MZF1P28698 734 aaPredicted RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 WEE1P30291 646 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 IL13P35225 146 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 TNNT2P45379 298 aaPredicted RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 KCNC4Q03721 635 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 TNIP1Q15025 636 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 TBC1D9BQ66K14 1250 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 ZNF790Q6PG37 636 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 DZIP3Q86Y13 1208 aaKnown RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 SYNE4Q8N205 404 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 TSEN2Q8NCE0 465 aaKnown RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 IL17RAQ96F46 866 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 RBM17Q96I25 401 aaKnown RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 HINFPQ9BQA5 517 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 CFHR5Q9BXR6 569 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 ADARB2Q9NS39 739 aaKnown RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 FKBPLQ9UIM3 349 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 HEG1Q9ULI3 1381 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 HTATSF1O43719 755 aaKnown RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 SNRPA1P09661 255 aaKnown RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 PLCB3Q01970 1234 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 UBE4AQ14139 1066 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 BLOC1S3Q6QNY0 202 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 FERMT3Q86UX7 667 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 NIM1KQ8IY84 436 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 NBPF15Q8N660 670 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 PNISRQ8TF01 805 aaKnown RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 C7orf43Q8WVR3 580 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 RTF1Q92541 710 aaKnown RBP4.87□□□□□ -1.63
CLN5-214ENST00000636705 NEUROD4Q9HD90 331 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 SNTG2Q9NY99 539 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 NUDCQ9Y266 331 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 ITGB4P16144 1822 aa4.87□□□□□ -1.63
CLN5-214ENST00000636705 NDUFB5O43674 189 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 FZD6O60353 706 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 PTMSP20962 102 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 BDNFP23560 247 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 ATP1A2P50993 1020 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 GYS2P54840 703 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 GTF2IP78347 998 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 PAK2Q13177 524 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 CDC37L1Q7L3B6 337 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 WDR75Q8IWA0 830 aaKnown RBP4.86□□□□□ -1.63
CLN5-214ENST00000636705 SCUBE3Q8IX30 993 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 RPGRQ92834 1020 aaKnown RBP4.86□□□□□ -1.63
CLN5-214ENST00000636705 CRELD1Q96HD1 420 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 CFAP53Q96M91 514 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 MPHOSPH6Q99547 160 aaKnown RBP4.86□□□□□ -1.63
CLN5-214ENST00000636705 SAP130Q9H0E3 1048 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 KIAA1551Q9HCM1 1747 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 N4BP2Q86UW6 1770 aaPredicted RBP4.86□□□□□ -1.63
CLN5-214ENST00000636705 ERVV-1B6SEH8 477 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 H7C1D1 291 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 GNALP38405 381 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 CDKN1CP49918 316 aaPredicted RBP4.86□□□□□ -1.63
CLN5-214ENST00000636705 RASA3Q14644 834 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 KRBA2Q6ZNG9 492 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 CKAP2LQ8IYA6 745 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 SH3TC2Q8TF17 1288 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 C8orf48Q96LL4 319 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 CCDC85AQ96PX6 553 aaPredicted RBP4.86□□□□□ -1.63
CLN5-214ENST00000636705 CRAMP1Q96RY5 1269 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 PNNQ9H307 717 aaKnown RBP4.86□□□□□ -1.63
CLN5-214ENST00000636705 PANK3Q9H999 370 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 KIF7Q2M1P5 1343 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 RNF123Q5XPI4 1314 aa4.86□□□□□ -1.63
CLN5-214ENST00000636705 PNMA6FA0A0J9YX94 578 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 BTBD11A6QL63 1104 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 CAMTA2O94983 1202 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 SLC39A6Q13433 755 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 DGKZQ13574 1117 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 MAP1SQ66K74 1059 aaPredicted RBP4.85□□□□□ -1.63
CLN5-214ENST00000636705 PPP1R42Q7Z4L9 355 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 JAMLQ86YT9 394 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 NKX2-3Q8TAU0 364 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 MTA3Q9BTC8 594 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 LGR6Q9HBX8 967 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 MAP10Q9P2G4 905 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 NIP7Q9Y221 180 aaKnown RBP eCLIP4.85□□□□□ -1.63
CLN5-214ENST00000636705 NOD1Q9Y239 953 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 SLC27A5Q9Y2P5 690 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 ANKRD26Q9UPS8 1709 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 CDC45O75419 566 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 BBOX1O75936 387 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 FAM13AO94988 1023 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 HCLS1P14317 486 aaPredicted RBP4.85□□□□□ -1.63
CLN5-214ENST00000636705 HOXA10P31260 410 aaPredicted RBP4.85□□□□□ -1.63
CLN5-214ENST00000636705 MMP14P50281 582 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 PUS10Q3MIT2 529 aaKnown RBP4.85□□□□□ -1.63
CLN5-214ENST00000636705 PARP10Q53GL7 1025 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 SYCP2LQ5T4T6 812 aa4.85□□□□□ -1.63
CLN5-214ENST00000636705 BRICD5Q6PL45 260 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms