RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 MICU3Q86XE3 530 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 STK11IPQ8N1F8 1099 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 PUS3Q9BZE2 481 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 PDE11AQ9HCR9 933 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 FBXO2Q9UK22 296 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 L1RE1Q9UN81 338 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 CEP131Q9UPN4 1083 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 UBN2Q6ZU65 1347 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 SOWAHDA6NJG2 315 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 PIP4K2BP78356 416 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 NFXL1Q6ZNB6 911 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 RASGRP2Q7LDG7 609 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 SPATA20Q8TB22 786 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 LZTFL1Q9NQ48 299 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 VPS18Q9P253 973 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 ADORA1P30542 326 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 MCM6Q14566 821 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 WHAMMP3Q1A5X7 153 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 KIF4BQ2VIQ3 1234 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 FILIP1LQ4L180 1135 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 NOM1Q5C9Z4 860 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 SAMSN1Q9NSI8 373 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 WDR17Q8IZU2 1322 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 SEMA3EO15041 775 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 FMNL1O95466 1100 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 GYS2P54840 703 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 MTF1Q14872 753 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 HSP90B2PQ58FF3 399 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 SPATA1Q5VX52 437 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 CTR9Q6PD62 1173 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 TBC1D10CQ8IV04 446 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 CNGA4Q8IV77 575 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 TRMT44Q8IYL2 757 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 IGSF22Q8N9C0 903 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 FOXP1Q9H334 677 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 ZSWIM4Q9H7M6 989 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 MYO1AQ9UBC5 1043 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 PUF60Q9UHX1 559 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 TBC1D2BQ9UPU7 963 aa16.86■□□□□ 0.29
CACNA1A-220ENST00000635988 NBPF26B4DH59 902 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 RANBP6O60518 1105 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 MMP1P03956 469 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 LIFRP42702 1097 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 TTF1Q15361 905 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 ZNF569Q5MCW4 686 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 NBPF14Q5TI25 921 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 NBPF10Q6P3W6 841 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 RAD9BQ6WBX8 426 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 NBPF15Q8N660 670 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 GOLGA6L1Q8N7Z2 621 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 IGDCC4Q8TDY8 1250 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 TEX13AQ9BXU3 409 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 RRP15Q9Y3B9 282 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 ATRNO75882 1429 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 RXRAP19793 462 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 ADD2P35612 726 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 FAM71BQ8TC56 605 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 SLC26A6Q9BXS9 759 aa16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 IRX2Q9BZI1 471 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 MKRN1Q9UHC7 482 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 SRPRBQ9Y5M8 271 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-220ENST00000635988 TJP1Q07157 1748 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 CTAGE15A4D2H0 777 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 CTAGE8P0CG41 777 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 IFNAR1P17181 557 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 RBL2Q08999 1139 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 SCARF1Q14162 830 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 TMEM67Q5HYA8 995 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 SPECC1Q5M775 1068 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 SLC9C2Q5TAH2 1124 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 TTLL7Q6ZT98 887 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 CTAGE6Q86UF2 777 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 CTAGE4Q8IX94 777 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 SLC12A7Q9Y666 1083 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 MEGF6O75095 1541 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 B4E1Z4 1266 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 MFAP3LO75121 409 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 FECHP22830 423 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 PBX1P40424 430 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 HSP90AB3PQ58FF7 597 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 DIS3L2Q8IYB7 885 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 C10orf67Q8IYJ2 551 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 TRIM22Q8IYM9 498 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 LY9Q9HBG7 655 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 MED4Q9NPJ6 270 aa16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 FAM217BQ9NTX9 383 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-220ENST00000635988 ITIH6Q6UXX5 1313 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 ACTN4O43707 911 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 APPP05067 770 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 TOB1P50616 345 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 UBE3CQ15386 1083 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 ZNF827Q17R98 1081 aa16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 APTXQ7Z2E3 356 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-220ENST00000635988 ZNF512BQ96KM6 892 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms