RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 USP40Q9NVE5 1235 aa18.18■□□□□ 0.5
CLN8-209ENST00000635970 ZNF532Q9HCE3 1301 aa18.18■□□□□ 0.5
CLN8-209ENST00000635970 LDHCP07864 332 aa18.17■□□□□ 0.5
CLN8-209ENST00000635970 APOBEC3FQ8IUX4 373 aaKnown RBP18.17■□□□□ 0.5
CLN8-209ENST00000635970 SMAP1Q8IYB5 467 aaPredicted RBP18.17■□□□□ 0.5
CLN8-209ENST00000635970 KBTBD3Q8NAB2 608 aa18.17■□□□□ 0.5
CLN8-209ENST00000635970 TCRBV5S4A2TA0A5A2 114 aa18.17■□□□□ 0.5
CLN8-209ENST00000635970 ZSCAN22P10073 491 aaPredicted RBP18.17■□□□□ 0.5
CLN8-209ENST00000635970 NFIAQ12857 509 aa18.17■□□□□ 0.5
CLN8-209ENST00000635970 RAD50Q92878 1312 aa18.16■□□□□ 0.5
CLN8-209ENST00000635970 CNTNAP1P78357 1384 aa18.16■□□□□ 0.5
CLN8-209ENST00000635970 RFX7Q2KHR2 1363 aa18.16■□□□□ 0.5
CLN8-209ENST00000635970 ADD2P35612 726 aa18.16■□□□□ 0.5
CLN8-209ENST00000635970 RHBDL3P58872 404 aa18.16■□□□□ 0.5
CLN8-209ENST00000635970 DYNLL1P63167 89 aaKnown RBP18.16■□□□□ 0.5
CLN8-209ENST00000635970 CDAN1Q8IWY9 1227 aa18.16■□□□□ 0.5
CLN8-209ENST00000635970 CHAMP1Q96JM3 812 aa18.16■□□□□ 0.5
CLN8-209ENST00000635970 DEFB129Q9H1M3 183 aa18.16■□□□□ 0.5
CLN8-209ENST00000635970 ZNF408Q9H9D4 720 aa18.16■□□□□ 0.5
CLN8-209ENST00000635970 GADD45BO75293 160 aaPredicted RBP18.15■□□□□ 0.5
CLN8-209ENST00000635970 SH3RF3Q8TEJ3 882 aaPredicted RBP18.15■□□□□ 0.5
CLN8-209ENST00000635970 CDCA5Q96FF9 252 aa18.15■□□□□ 0.5
CLN8-209ENST00000635970 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLN8-209ENST00000635970 SPTLC3Q9NUV7 552 aa18.15■□□□□ 0.5
CLN8-209ENST00000635970 TMOD2Q9NZR1 351 aa18.15■□□□□ 0.5
CLN8-209ENST00000635970 LIMCH1Q9UPQ0 1083 aa18.15■□□□□ 0.5
CLN8-209ENST00000635970 SGSM2O43147 1006 aa18.15■□□□□ 0.5
CLN8-209ENST00000635970 RASA3Q14644 834 aa18.15■□□□□ 0.5
CLN8-209ENST00000635970 NOLC1Q14978 699 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLN8-209ENST00000635970 TTC14Q96N46 770 aa18.15■□□□□ 0.5
CLN8-209ENST00000635970 FSD1Q9BTV5 496 aa18.15■□□□□ 0.5
CLN8-209ENST00000635970 TMEM39BQ9GZU3 492 aa18.15■□□□□ 0.5
CLN8-209ENST00000635970 WDHD1O75717 1129 aaPredicted RBP18.14■□□□□ 0.49
CLN8-209ENST00000635970 TCP10Q12799 353 aa18.14■□□□□ 0.49
CLN8-209ENST00000635970 NOL10Q9BSC4 688 aaKnown RBP18.14■□□□□ 0.49
CLN8-209ENST00000635970 DDX4Q9NQI0 724 aaKnown RBP18.14■□□□□ 0.49
CLN8-209ENST00000635970 SSC5DA1L4H1 1573 aa18.14■□□□□ 0.49
CLN8-209ENST00000635970 NAV1Q8NEY1 1877 aa18.13■□□□□ 0.49
CLN8-209ENST00000635970 STX6O43752 255 aa18.13■□□□□ 0.49
CLN8-209ENST00000635970 IGSF3O75054 1194 aa18.13■□□□□ 0.49
CLN8-209ENST00000635970 PICALMQ13492 652 aa18.13■□□□□ 0.49
CLN8-209ENST00000635970 DNTTIP2Q5QJE6 756 aaKnown RBP18.13■□□□□ 0.49
CLN8-209ENST00000635970 UPF3BQ9BZI7 483 aaKnown RBP18.13■□□□□ 0.49
CLN8-209ENST00000635970 FAM198AQ9UFP1 575 aa18.13■□□□□ 0.49
CLN8-209ENST00000635970 CEP350Q5VT06 3117 aa18.13■□□□□ 0.49
CLN8-209ENST00000635970 KDM4AO75164 1064 aa18.13■□□□□ 0.49
CLN8-209ENST00000635970 TNFAIP1Q13829 316 aa18.13■□□□□ 0.49
CLN8-209ENST00000635970 CST9Q5W186 159 aa18.13■□□□□ 0.49
CLN8-209ENST00000635970 ZSCAN31Q96LW9 406 aaPredicted RBP18.13■□□□□ 0.49
CLN8-209ENST00000635970 DDX60LQ5H9U9 1706 aaKnown RBP18.12■□□□□ 0.49
CLN8-209ENST00000635970 CELF2O95319 508 aaKnown RBP18.12■□□□□ 0.49
CLN8-209ENST00000635970 ADCY5O95622 1261 aa18.12■□□□□ 0.49
CLN8-209ENST00000635970 BAG3O95817 575 aa18.12■□□□□ 0.49
CLN8-209ENST00000635970 ZFPM1Q8IX07 1006 aa18.12■□□□□ 0.49
CLN8-209ENST00000635970 TEX11Q8IYF3 940 aa18.12■□□□□ 0.49
CLN8-209ENST00000635970 EVI5LQ96CN4 794 aa18.12■□□□□ 0.49
CLN8-209ENST00000635970 RIOK1Q9BRS2 568 aaKnown RBP18.12■□□□□ 0.49
CLN8-209ENST00000635970 CCDC94Q9BW85 323 aaPredicted RBP18.12■□□□□ 0.49
CLN8-209ENST00000635970 MYH1P12882 1939 aa18.12■□□□□ 0.49
CLN8-209ENST00000635970 F13A1P00488 732 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 PPP4CP60510 307 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 HTRA3P83110 453 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 UBE3CQ15386 1083 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 ZSCAN25Q6NSZ9 544 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 LCORLQ8N3X6 602 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 PUS7LQ9H0K6 701 aaKnown RBP18.11■□□□□ 0.49
CLN8-209ENST00000635970 FZD1Q9UP38 647 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 SMC3Q9UQE7 1217 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 SNX14Q9Y5W7 946 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 MAGEB6P1A0A0J9YX57 407 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 RNF113AO15541 343 aaKnown RBP18.11■□□□□ 0.49
CLN8-209ENST00000635970 TNNI2P48788 182 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 NBPF12Q5TAG4 269 aaPredicted RBP18.11■□□□□ 0.49
CLN8-209ENST00000635970 RUFY2Q8WXA3 655 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 TEPSINQ96N21 525 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 IDI2Q9BXS1 227 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 OTOFQ9HC10 1997 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 SH2B1Q9NRF2 756 aaPredicted RBP18.11■□□□□ 0.49
CLN8-209ENST00000635970 USP25Q9UHP3 1055 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 BAZ2AQ9UIF9 1905 aaKnown RBP18.11■□□□□ 0.49
CLN8-209ENST00000635970 PPP2R3BQ9Y5P8 575 aa18.11■□□□□ 0.49
CLN8-209ENST00000635970 SIPA1L1O43166 1804 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 APLP1P51693 650 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 FKBP1CQ5VVH2 108 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 TMED8Q6PL24 325 aaPredicted RBP18.1■□□□□ 0.49
CLN8-209ENST00000635970 NOL8Q76FK4 1167 aaKnown RBP18.1■□□□□ 0.49
CLN8-209ENST00000635970 FAM83AQ86UY5 434 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 OSBP2Q969R2 916 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 ARMT1Q9H993 441 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 GOLGA6L6A8MZA4 724 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 MBD4O95243 580 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 SYT1P21579 422 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 TGFBRAP1Q8WUH2 860 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 SEC62Q99442 399 aaKnown RBP18.1■□□□□ 0.49
CLN8-209ENST00000635970 LSG1Q9H089 658 aaKnown RBP18.1■□□□□ 0.49
CLN8-209ENST00000635970 GDPD2Q9HCC8 539 aa18.1■□□□□ 0.49
CLN8-209ENST00000635970 PAPPA2Q9BXP8 1791 aa18.09■□□□□ 0.49
CLN8-209ENST00000635970 TCHHQ07283 1943 aa18.09■□□□□ 0.49
CLN8-209ENST00000635970 PLCG2P16885 1265 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms