RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 JCADQ9P266 1359 aa16.51■□□□□ 0.23
PTBP1-221ENST00000635647 SALL1Q9NSC2 1324 aa16.51■□□□□ 0.23
PTBP1-221ENST00000635647 PUM3Q15397 648 aaKnown RBP16.51■□□□□ 0.23
PTBP1-221ENST00000635647 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
PTBP1-221ENST00000635647 LZTFL1Q9NQ48 299 aa16.51■□□□□ 0.23
PTBP1-221ENST00000635647 IMPACTQ9P2X3 320 aa16.51■□□□□ 0.23
PTBP1-221ENST00000635647 NFE2L3Q9Y4A8 694 aa16.51■□□□□ 0.23
PTBP1-221ENST00000635647 CASP1P29466 404 aa16.5■□□□□ 0.23
PTBP1-221ENST00000635647 RBM6P78332 1123 aaKnown RBP16.5■□□□□ 0.23
PTBP1-221ENST00000635647 E4F1Q66K89 784 aaPredicted RBP16.5■□□□□ 0.23
PTBP1-221ENST00000635647 TMEM87BQ96K49 555 aa16.5■□□□□ 0.23
PTBP1-221ENST00000635647 V9GY48 417 aaPredicted RBP16.5■□□□□ 0.23
PTBP1-221ENST00000635647 PDE8AO60658 829 aa16.5■□□□□ 0.23
PTBP1-221ENST00000635647 NLRP5P59047 1200 aa16.5■□□□□ 0.23
PTBP1-221ENST00000635647 AXDND1Q5T1B0 1012 aaPredicted RBP16.5■□□□□ 0.23
PTBP1-221ENST00000635647 BRINP3Q76B58 766 aa16.5■□□□□ 0.23
PTBP1-221ENST00000635647 NBPF11Q86T75 865 aa16.5■□□□□ 0.23
PTBP1-221ENST00000635647 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
PTBP1-221ENST00000635647 DESI2Q9BSY9 194 aa16.5■□□□□ 0.23
PTBP1-221ENST00000635647 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.5■□□□□ 0.23
PTBP1-221ENST00000635647 ANKIB1Q9P2G1 1089 aa16.5■□□□□ 0.23
PTBP1-221ENST00000635647 TSPY2A6NKD2 308 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 TSR1Q2NL82 804 aaKnown RBP16.49■□□□□ 0.23
PTBP1-221ENST00000635647 FAM47AQ5JRC9 791 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 FOXP2O15409 715 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 USP5P45974 858 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 DNA2P51530 1060 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 CAVIN4Q5BKX8 364 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 LPIN2Q92539 896 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 CARD6Q9BX69 1037 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 PATL2C9JE40 543 aaKnown RBP16.49■□□□□ 0.23
PTBP1-221ENST00000635647 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 NOSTRINQ8IVI9 506 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 STRBPQ96SI9 672 aaKnown RBP16.49■□□□□ 0.23
PTBP1-221ENST00000635647 KRT23Q9C075 422 aa16.49■□□□□ 0.23
PTBP1-221ENST00000635647 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 VWA3AA6NCI4 1184 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 CCP110O43303 1012 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 SSBP05455 408 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTBP1-221ENST00000635647 RASGRF1Q13972 1273 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 ENOX2Q16206 610 aaKnown RBP16.48■□□□□ 0.23
PTBP1-221ENST00000635647 IQCA1Q86XH1 822 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 CUTAO60888 179 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 CDC25AP30304 524 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 CCT6AP40227 531 aaKnown RBP16.48■□□□□ 0.23
PTBP1-221ENST00000635647 GRIN1Q05586 938 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 SMYD4Q8IYR2 804 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-221ENST00000635647 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 ZSCAN12O43309 604 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 CASQ1P31415 396 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 IFIT1BQ5T764 474 aaKnown RBP16.48■□□□□ 0.23
PTBP1-221ENST00000635647 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTBP1-221ENST00000635647 MKNK2Q9HBH9 465 aa16.48■□□□□ 0.23
PTBP1-221ENST00000635647 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
PTBP1-221ENST00000635647 FAM170AA1A519 330 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 MCM7P33993 719 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 POSTNQ15063 836 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 UBE3CQ15386 1083 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 CARD10Q9BWT7 1032 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 PCDHB6Q9Y5E3 794 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 CCDC196A0A1B0GTZ2 297 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 GYS2P54840 703 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 GOLGA6L1Q8N7Z2 621 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 CTCFLQ8NI51 663 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-221ENST00000635647 BAG1Q99933 345 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-221ENST00000635647 ZHX3Q9H4I2 956 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 UBN2Q6ZU65 1347 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 NAP1L1P55209 391 aaKnown RBP16.47■□□□□ 0.23
PTBP1-221ENST00000635647 DDB1Q16531 1140 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 CATIPQ7Z7H3 387 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
PTBP1-221ENST00000635647 EPC1Q9H2F5 836 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 DACH1Q9UI36 760 aa16.47■□□□□ 0.23
PTBP1-221ENST00000635647 TNS3Q68CZ2 1445 aa16.46■□□□□ 0.23
PTBP1-221ENST00000635647 IBSPP21815 317 aaPredicted RBP16.46■□□□□ 0.23
PTBP1-221ENST00000635647 GTF2A1P52655 376 aaPredicted RBP16.46■□□□□ 0.23
PTBP1-221ENST00000635647 BLZF1Q9H2G9 400 aa16.46■□□□□ 0.23
PTBP1-221ENST00000635647 LY9Q9HBG7 655 aa16.46■□□□□ 0.23
PTBP1-221ENST00000635647 AATFQ9NY61 560 aaKnown RBP eCLIP16.46■□□□□ 0.235e-7■■■■□ 20.4
PTBP1-221ENST00000635647 F8W031 263 aaPredicted RBP16.46■□□□□ 0.23
PTBP1-221ENST00000635647 CCDC152Q4G0S7 254 aa16.46■□□□□ 0.23
PTBP1-221ENST00000635647 LRRN4CLQ8ND94 238 aa16.46■□□□□ 0.23
PTBP1-221ENST00000635647 ANKRD20A12PQ8NF67 263 aa16.46■□□□□ 0.23
PTBP1-221ENST00000635647 OXER1Q8TDS5 423 aa16.46■□□□□ 0.23
PTBP1-221ENST00000635647 ANKRD65E5RJM6 399 aa16.46■□□□□ 0.22
PTBP1-221ENST00000635647 FILIP1LQ4L180 1135 aa16.46■□□□□ 0.22
PTBP1-221ENST00000635647 NYAP1Q6ZVC0 841 aa16.46■□□□□ 0.22
PTBP1-221ENST00000635647 METTL16Q86W50 562 aaKnown RBP16.46■□□□□ 0.22
PTBP1-221ENST00000635647 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.22
PTBP1-221ENST00000635647 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.22
PTBP1-221ENST00000635647 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.46■□□□□ 0.223e-9■■□□□ 11.7
PTBP1-221ENST00000635647 PRR29P0C7W0 189 aa16.45■□□□□ 0.22
PTBP1-221ENST00000635647 ETF1P62495 437 aaKnown RBP16.45■□□□□ 0.22
PTBP1-221ENST00000635647 NBPF3Q9H094 633 aa16.45■□□□□ 0.22
PTBP1-221ENST00000635647 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
PTBP1-221ENST00000635647 RGPD5Q99666 1765 aa16.45■□□□□ 0.22
PTBP1-221ENST00000635647 ZNF335Q9H4Z2 1342 aaPredicted RBP16.45■□□□□ 0.22
PTBP1-221ENST00000635647 SAMSN1Q9NSI8 373 aaKnown RBP16.45■□□□□ 0.22
PTBP1-221ENST00000635647 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms