RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	PARD6A	Q9NPB6	346 aa		4.66	□□□□□ -1.66
SMARCB1-208	ENST00000634926	GLDC	P23378	1020 aa		4.65	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ERVFC1	P60507	584 aa		4.65	□□□□□ -1.67
SMARCB1-208	ENST00000634926	NFKB2	Q00653	900 aa		4.65	□□□□□ -1.67
SMARCB1-208	ENST00000634926	AAMP	Q13685	434 aa		4.65	□□□□□ -1.67
SMARCB1-208	ENST00000634926	DDX54	Q8TDD1	881 aa	Known RBP	4.65	□□□□□ -1.67
SMARCB1-208	ENST00000634926	HSPA12B	Q96MM6	686 aa		4.65	□□□□□ -1.67
SMARCB1-208	ENST00000634926	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.65	□□□□□ -1.67
SMARCB1-208	ENST00000634926	PRDM10	Q9NQV6	1147 aa		4.65	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ADAMTS20	P59510	1910 aa		4.65	□□□□□ -1.67
SMARCB1-208	ENST00000634926	TCAF2	A6NFQ2	919 aa		4.64	□□□□□ -1.67
SMARCB1-208	ENST00000634926	BMP7	P18075	431 aa		4.64	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ALKBH2	Q6NS38	261 aa		4.64	□□□□□ -1.67
SMARCB1-208	ENST00000634926	EHD4	Q9H223	541 aa		4.64	□□□□□ -1.67
SMARCB1-208	ENST00000634926	EPB41L4B	Q9H329	900 aa		4.64	□□□□□ -1.67
SMARCB1-208	ENST00000634926	NPHS2	Q9NP85	383 aa		4.64	□□□□□ -1.67
SMARCB1-208	ENST00000634926	KRT82	Q9NSB4	513 aa		4.64	□□□□□ -1.67
SMARCB1-208	ENST00000634926	USP5	P45974	858 aa		4.63	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ORC1	Q13415	861 aa		4.63	□□□□□ -1.67
SMARCB1-208	ENST00000634926	RNF214	Q8ND24	703 aa		4.63	□□□□□ -1.67
SMARCB1-208	ENST00000634926	KCNC2	Q96PR1	638 aa		4.63	□□□□□ -1.67
SMARCB1-208	ENST00000634926	CSRNP1	Q96S65	589 aa		4.63	□□□□□ -1.67
SMARCB1-208	ENST00000634926	SSU72	Q9NP77	194 aa	Known RBP	4.63	□□□□□ -1.67
SMARCB1-208	ENST00000634926	CSAD	Q9Y600	493 aa		4.63	□□□□□ -1.67
SMARCB1-208	ENST00000634926	CECR2	Q9BXF3	1484 aa		4.62	□□□□□ -1.67
SMARCB1-208	ENST00000634926	CLCN7	P51798	805 aa		4.62	□□□□□ -1.67
SMARCB1-208	ENST00000634926	PTPN12	Q05209	780 aa	Known RBP	4.62	□□□□□ -1.67
SMARCB1-208	ENST00000634926	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.62	□□□□□ -1.67
SMARCB1-208	ENST00000634926	PPM1J	Q5JR12	505 aa		4.62	□□□□□ -1.67
SMARCB1-208	ENST00000634926	KCNN1	Q92952	543 aa		4.62	□□□□□ -1.67
SMARCB1-208	ENST00000634926	KCNB2	Q92953	911 aa		4.62	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ANO2	Q9NQ90	1003 aa		4.62	□□□□□ -1.67
SMARCB1-208	ENST00000634926	GTF2IRD1	Q9UHL9	959 aa		4.62	□□□□□ -1.67
SMARCB1-208	ENST00000634926	DNAJC25-GNG10	A0A024R161	153 aa		4.61	□□□□□ -1.67
SMARCB1-208	ENST00000634926	TMEM238L	A0A1B0GVL6	79 aa		4.61	□□□□□ -1.67
SMARCB1-208	ENST00000634926	TRHR	P34981	398 aa	Predicted RBP	4.61	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ERVK-24	P63145	666 aa		4.61	□□□□□ -1.67
SMARCB1-208	ENST00000634926	RALGPS1	Q5JS13	557 aa		4.61	□□□□□ -1.67
SMARCB1-208	ENST00000634926	CDKAL1	Q5VV42	579 aa		4.61	□□□□□ -1.67
SMARCB1-208	ENST00000634926	DNAJC25	Q9H1X3	360 aa		4.61	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ZCCHC4	Q9H5U6	513 aa		4.61	□□□□□ -1.67
SMARCB1-208	ENST00000634926	SP110	Q9HB58	689 aa		4.61	□□□□□ -1.67
SMARCB1-208	ENST00000634926		H3BS24	57 aa		4.6	□□□□□ -1.67
SMARCB1-208	ENST00000634926	TRIM13	O60858	407 aa		4.6	□□□□□ -1.67
SMARCB1-208	ENST00000634926	SSFA2	P28290	1259 aa		4.6	□□□□□ -1.67
SMARCB1-208	ENST00000634926	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.6	□□□□□ -1.67
SMARCB1-208	ENST00000634926	PRPF40B	Q6NWY9	871 aa	Known RBP	4.6	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ABHD4	Q8TB40	342 aa		4.6	□□□□□ -1.67
SMARCB1-208	ENST00000634926	GPBAR1	Q8TDU6	330 aa		4.6	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ST14	Q9Y5Y6	855 aa		4.6	□□□□□ -1.67
SMARCB1-208	ENST00000634926	MYOCOS	A0A1B0GUC4	107 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	GNAT3	A8MTJ3	354 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	WASH4P	A8MWX3	477 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	FAM13A	O94988	1023 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	SLITRK5	O94991	958 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	RING1	Q06587	406 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ZNF211	Q13398	564 aa	Predicted RBP	4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	PHLDB3	Q6NSJ2	640 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	DBX2	Q6ZNG2	339 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	TTC6	Q86TZ1	520 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	NPAS4	Q8IUM7	802 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	ALPK1	Q96QP1	1244 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	CACNA2D2	Q9NY47	1150 aa		4.59	□□□□□ -1.67
SMARCB1-208	ENST00000634926	GRM2	Q14416	872 aa		4.58	□□□□□ -1.68
SMARCB1-208	ENST00000634926	MAP1S	Q66K74	1059 aa	Predicted RBP	4.58	□□□□□ -1.68
SMARCB1-208	ENST00000634926	C12orf40	Q86WS4	652 aa		4.58	□□□□□ -1.68
SMARCB1-208	ENST00000634926	MARCH10	Q8NA82	808 aa	Predicted RBP	4.58	□□□□□ -1.68
SMARCB1-208	ENST00000634926	RIN3	Q8TB24	985 aa		4.58	□□□□□ -1.68
SMARCB1-208	ENST00000634926	GRIN3A	Q8TCU5	1115 aa		4.58	□□□□□ -1.68
SMARCB1-208	ENST00000634926	MCOLN1	Q9GZU1	580 aa		4.58	□□□□□ -1.68
SMARCB1-208	ENST00000634926	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.58	□□□□□ -1.68
SMARCB1-208	ENST00000634926	SLAMF8	Q9P0V8	285 aa		4.58	□□□□□ -1.68
SMARCB1-208	ENST00000634926	DCDC2C	A8MYV0	355 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	SYN1	P17600	705 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	DLG4	P78352	724 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	FGD1	P98174	961 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	FKBP4	Q02790	459 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	ZNF252P-AS1	Q0IIN9	211 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	ARMCX6	Q7L4S7	300 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	SULF2	Q8IWU5	870 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	CCDC74A	Q96AQ1	378 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	SLC26A8	Q96RN1	970 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	SGPP1	Q9BX95	441 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	FOXQ1	Q9C009	403 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	RNF32	Q9H0A6	362 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	XYLT2	Q9H1B5	865 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	GCM1	Q9NP62	436 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	CAPN6	Q9Y6Q1	641 aa		4.57	□□□□□ -1.68
SMARCB1-208	ENST00000634926	TMEM88B	A6NKF7	163 aa		4.56	□□□□□ -1.68
SMARCB1-208	ENST00000634926	ESR1	P03372	595 aa		4.56	□□□□□ -1.68
SMARCB1-208	ENST00000634926	SRF	P11831	508 aa		4.56	□□□□□ -1.68
SMARCB1-208	ENST00000634926	HK2	P52789	917 aa		4.56	□□□□□ -1.68
SMARCB1-208	ENST00000634926	NFIX	Q14938	502 aa		4.56	□□□□□ -1.68
SMARCB1-208	ENST00000634926	PANK1	Q8TE04	598 aa		4.56	□□□□□ -1.68
SMARCB1-208	ENST00000634926	EPS8L3	Q8TE67	593 aa	Known RBP	4.56	□□□□□ -1.68
SMARCB1-208	ENST00000634926	UBE2F	Q969M7	185 aa		4.56	□□□□□ -1.68
SMARCB1-208	ENST00000634926	PBXIP1	Q96AQ6	731 aa		4.56	□□□□□ -1.68
SMARCB1-208	ENST00000634926	ADAMTS10	Q9H324	1103 aa		4.56	□□□□□ -1.68
SMARCB1-208	ENST00000634926	C19orf44	Q9H6X5	657 aa		4.56	□□□□□ -1.68

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