RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	CCL5	P13501	91 aa		27.41	■■□□□ 1.98
SRRM2-231	ENST00000630499	GJA8	P48165	433 aa		27.41	■■□□□ 1.98
SRRM2-231	ENST00000630499	GORAB	Q5T7V8	394 aa		27.41	■■□□□ 1.98
SRRM2-231	ENST00000630499	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	27.41	■■□□□ 1.98	9e-78	■□□□□ 9.7
SRRM2-231	ENST00000630499	RAI14	Q9P0K7	980 aa		27.41	■■□□□ 1.98
SRRM2-231	ENST00000630499	TRIOBP	Q9H2D6	2365 aa		27.41	■■□□□ 1.98
SRRM2-231	ENST00000630499	TNNI3K	Q59H18	835 aa		27.4	■■□□□ 1.98
SRRM2-231	ENST00000630499	PROCA1	Q8NCQ7	364 aa	Predicted RBP	27.4	■■□□□ 1.98
SRRM2-231	ENST00000630499	SLAIN1	Q8ND83	568 aa		27.4	■■□□□ 1.98
SRRM2-231	ENST00000630499	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	27.4	■■□□□ 1.98
SRRM2-231	ENST00000630499	FPGT-TNNI3K	V9GXZ4	949 aa		27.4	■■□□□ 1.98
SRRM2-231	ENST00000630499	CAP2	P40123	477 aa		27.39	■■□□□ 1.98
SRRM2-231	ENST00000630499	ZKSCAN2	Q63HK3	967 aa		27.39	■■□□□ 1.98
SRRM2-231	ENST00000630499	ADGRA1	Q86SQ6	560 aa		27.39	■■□□□ 1.98
SRRM2-231	ENST00000630499	DBNDD2	Q9BQY9	259 aa		27.39	■■□□□ 1.98
SRRM2-231	ENST00000630499	FLT3LG	P49771	235 aa		27.38	■■□□□ 1.97
SRRM2-231	ENST00000630499	FXR1	P51114	621 aa	Known RBP eCLIP	27.38	■■□□□ 1.97	9e-7	■■□□□ 14.2
SRRM2-231	ENST00000630499	PPP4C	P60510	307 aa		27.38	■■□□□ 1.97
SRRM2-231	ENST00000630499	ATP8B2	P98198	1209 aa		27.38	■■□□□ 1.97
SRRM2-231	ENST00000630499	IRF5	Q13568	498 aa		27.38	■■□□□ 1.97
SRRM2-231	ENST00000630499	METTL16	Q86W50	562 aa	Known RBP	27.38	■■□□□ 1.97
SRRM2-231	ENST00000630499	TEX11	Q8IYF3	940 aa		27.38	■■□□□ 1.97
SRRM2-231	ENST00000630499	ZNF512B	Q96KM6	892 aa	Predicted RBP	27.38	■■□□□ 1.97
SRRM2-231	ENST00000630499	COLQ	Q9Y215	455 aa	Predicted RBP	27.38	■■□□□ 1.97
SRRM2-231	ENST00000630499		H0YGN5	161 aa		27.37	■■□□□ 1.97
SRRM2-231	ENST00000630499	CYP2E1	P05181	493 aa	Predicted RBP	27.37	■■□□□ 1.97
SRRM2-231	ENST00000630499	ZNF280C	Q8ND82	737 aa		27.37	■■□□□ 1.97
SRRM2-231	ENST00000630499	NKX2-3	Q8TAU0	364 aa		27.37	■■□□□ 1.97
SRRM2-231	ENST00000630499	SNRK	Q9NRH2	765 aa		27.37	■■□□□ 1.97
SRRM2-231	ENST00000630499	LRP2BP	Q9P2M1	347 aa		27.37	■■□□□ 1.97
SRRM2-231	ENST00000630499	HERC5	Q9UII4	1024 aa	Known RBP	27.37	■■□□□ 1.97
SRRM2-231	ENST00000630499	NOP58	Q9Y2X3	529 aa	Known RBP	27.37	■■□□□ 1.97
SRRM2-231	ENST00000630499	PLXNB2	O15031	1838 aa		27.37	■■□□□ 1.97
SRRM2-231	ENST00000630499	SPP2	Q13103	211 aa		27.36	■■□□□ 1.97
SRRM2-231	ENST00000630499	SH3D19	Q5HYK7	790 aa		27.36	■■□□□ 1.97
SRRM2-231	ENST00000630499	PXYLP1	Q8TE99	480 aa		27.36	■■□□□ 1.97
SRRM2-231	ENST00000630499	SMCR8	Q8TEV9	937 aa	Predicted RBP	27.36	■■□□□ 1.97
SRRM2-231	ENST00000630499	TBC1D2	Q9BYX2	928 aa		27.36	■■□□□ 1.97
SRRM2-231	ENST00000630499	RNF208	Q9H0X6	261 aa		27.36	■■□□□ 1.97
SRRM2-231	ENST00000630499	UNC93B1	Q9H1C4	597 aa		27.36	■■□□□ 1.97
SRRM2-231	ENST00000630499	DNAJC18	Q9H819	358 aa		27.36	■■□□□ 1.97
SRRM2-231	ENST00000630499	ADCY3	O60266	1144 aa		27.35	■■□□□ 1.97
SRRM2-231	ENST00000630499	JAG1	P78504	1218 aa		27.35	■■□□□ 1.97
SRRM2-231	ENST00000630499	FAM110C	Q1W6H9	321 aa		27.35	■■□□□ 1.97
SRRM2-231	ENST00000630499	RLBP1	P12271	317 aa		27.34	■■□□□ 1.97
SRRM2-231	ENST00000630499	ELN	P15502	786 aa		27.34	■■□□□ 1.97
SRRM2-231	ENST00000630499	UBXN2A	P68543	259 aa		27.34	■■□□□ 1.97
SRRM2-231	ENST00000630499	NAA16	Q6N069	864 aa	Predicted RBP	27.34	■■□□□ 1.97
SRRM2-231	ENST00000630499	ANKRD13C	Q8N6S4	541 aa		27.34	■■□□□ 1.97
SRRM2-231	ENST00000630499	AATF	Q9NY61	560 aa	Known RBP eCLIP	27.34	■■□□□ 1.97	5e-8	■□□□□ 8.9
SRRM2-231	ENST00000630499	DBNL	Q9UJU6	430 aa	Known RBP	27.34	■■□□□ 1.97
SRRM2-231	ENST00000630499	TNPO2	O14787	897 aa	Known RBP	27.33	■■□□□ 1.97
SRRM2-231	ENST00000630499	ZBTB7B	O15156	539 aa	Predicted RBP	27.33	■■□□□ 1.97
SRRM2-231	ENST00000630499	HMGCS2	P54868	508 aa		27.33	■■□□□ 1.97
SRRM2-231	ENST00000630499	U2AF1L4	Q8WU68	220 aa	Known RBP	27.33	■■□□□ 1.97
SRRM2-231	ENST00000630499	DHX36	Q9H2U1	1008 aa	Known RBP	27.33	■■□□□ 1.97
SRRM2-231	ENST00000630499	C1orf115	Q9H7X2	142 aa		27.33	■■□□□ 1.97
SRRM2-231	ENST00000630499	PI4KB	Q9UBF8	816 aa		27.33	■■□□□ 1.97
SRRM2-231	ENST00000630499	LAMA3	Q16787	3333 aa		27.33	■■□□□ 1.97
SRRM2-231	ENST00000630499	FLT1	P17948	1338 aa		27.33	■■□□□ 1.97
SRRM2-231	ENST00000630499	USP17L5	A8MUK1	530 aa		27.32	■■□□□ 1.96
SRRM2-231	ENST00000630499	IGSF3	O75054	1194 aa		27.32	■■□□□ 1.96
SRRM2-231	ENST00000630499	TTC39A	Q5SRH9	613 aa		27.32	■■□□□ 1.96
SRRM2-231	ENST00000630499	WDR18	Q9BV38	432 aa		27.32	■■□□□ 1.96
SRRM2-231	ENST00000630499	PIH1D3	Q9NQM4	214 aa	Known RBP	27.32	■■□□□ 1.96
SRRM2-231	ENST00000630499	TLR7	Q9NYK1	1049 aa	Known RBP	27.32	■■□□□ 1.96
SRRM2-231	ENST00000630499	PNMA3	Q9UL41	463 aa		27.32	■■□□□ 1.96
SRRM2-231	ENST00000630499	INHA	P05111	366 aa		27.31	■■□□□ 1.96
SRRM2-231	ENST00000630499	CCDC158	Q5M9N0	1113 aa		27.31	■■□□□ 1.96
SRRM2-231	ENST00000630499	PAK6	Q9NQU5	681 aa	Predicted RBP	27.31	■■□□□ 1.96
SRRM2-231	ENST00000630499	BIN2	Q9UBW5	565 aa	Predicted RBP	27.31	■■□□□ 1.96
SRRM2-231	ENST00000630499	ALPK3	Q96L96	1907 aa		27.3	■■□□□ 1.96
SRRM2-231	ENST00000630499	SURF6	O75683	361 aa	Known RBP	27.3	■■□□□ 1.96
SRRM2-231	ENST00000630499	SGPL1	O95470	568 aa		27.3	■■□□□ 1.96
SRRM2-231	ENST00000630499	BAG3	O95817	575 aa		27.3	■■□□□ 1.96
SRRM2-231	ENST00000630499	ZAP70	P43403	619 aa		27.3	■■□□□ 1.96
SRRM2-231	ENST00000630499	SHROOM1	Q2M3G4	852 aa	Predicted RBP	27.3	■■□□□ 1.96
SRRM2-231	ENST00000630499	ASCC2	Q9H1I8	757 aa	Predicted RBP	27.3	■■□□□ 1.96
SRRM2-231	ENST00000630499	MYH1	P12882	1939 aa		27.29	■■□□□ 1.96
SRRM2-231	ENST00000630499	PLCG2	P16885	1265 aa		27.29	■■□□□ 1.96
SRRM2-231	ENST00000630499	GCLC	P48506	637 aa	Predicted RBP	27.29	■■□□□ 1.96
SRRM2-231	ENST00000630499	MAPKAPK5	Q8IW41	473 aa		27.29	■■□□□ 1.96
SRRM2-231	ENST00000630499	TGFBRAP1	Q8WUH2	860 aa		27.29	■■□□□ 1.96
SRRM2-231	ENST00000630499	EAF2	Q96CJ1	260 aa	Predicted RBP	27.29	■■□□□ 1.96
SRRM2-231	ENST00000630499	PRO3102	Q9H379	93 aa		27.29	■■□□□ 1.96
SRRM2-231	ENST00000630499	CRISPLD2	Q9H0B8	497 aa		27.28	■■□□□ 1.96
SRRM2-231	ENST00000630499	MORF4L1	Q9UBU8	362 aa		27.28	■■□□□ 1.96
SRRM2-231	ENST00000630499	GJD2	Q9UKL4	321 aa		27.28	■■□□□ 1.96
SRRM2-231	ENST00000630499	DDX60L	Q5H9U9	1706 aa	Known RBP	27.27	■■□□□ 1.96
SRRM2-231	ENST00000630499	BACE1	P56817	501 aa		27.27	■■□□□ 1.96
SRRM2-231	ENST00000630499	FOXP4	Q8IVH2	680 aa	Predicted RBP	27.27	■■□□□ 1.96
SRRM2-231	ENST00000630499	COA7	Q96BR5	231 aa		27.27	■■□□□ 1.96
SRRM2-231	ENST00000630499	NOL10	Q9BSC4	688 aa	Known RBP	27.27	■■□□□ 1.96
SRRM2-231	ENST00000630499	PALD1	Q9ULE6	856 aa		27.27	■■□□□ 1.96
SRRM2-231	ENST00000630499	FARP2	O94887	1054 aa	Predicted RBP	27.26	■■□□□ 1.95
SRRM2-231	ENST00000630499	ASNS	P08243	561 aa		27.26	■■□□□ 1.95
SRRM2-231	ENST00000630499	HOXA7	P31268	230 aa	Predicted RBP	27.26	■■□□□ 1.95
SRRM2-231	ENST00000630499	PABPC4	Q13310	644 aa	Known RBP eCLIP	27.26	■■□□□ 1.95	2e-10	■■■□□ 18.2
SRRM2-231	ENST00000630499	OS9	Q13438	667 aa	Predicted RBP	27.26	■■□□□ 1.95
SRRM2-231	ENST00000630499	AS3MT	Q9HBK9	375 aa		27.26	■■□□□ 1.95

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms