RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ZSCAN10Q96SZ4 725 aaPredicted RBP6.47□□□□□ -1.37
NEK3-211ENST00000629912 MAP3K14Q99558 947 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 UBAC1Q9BSL1 405 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 ALG1Q9BT22 464 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 CLSTN2Q9H4D0 955 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 AATFQ9NY61 560 aaKnown RBP eCLIP6.47□□□□□ -1.37
NEK3-211ENST00000629912 ARPP21Q9UBL0 812 aaPredicted RBP6.47□□□□□ -1.37
NEK3-211ENST00000629912 POLLQ9UGP5 575 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 SUGT1Q9Y2Z0 365 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 DUOX1Q9NRD9 1551 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 LRRC37AA6NMS7 1700 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 ANKRD31Q8N7Z5 1873 aa6.47□□□□□ -1.37
NEK3-211ENST00000629912 MYH6P13533 1939 aa6.46□□□□□ -1.37
NEK3-211ENST00000629912 PRPF3O43395 683 aaKnown RBP6.46□□□□□ -1.38
NEK3-211ENST00000629912 RANBP6O60518 1105 aaKnown RBP6.46□□□□□ -1.38
NEK3-211ENST00000629912 DDAH1O94760 285 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 UFL1O94874 794 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 DEXIO95424 95 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 CAVIN2O95810 425 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 CCDC192P0DO97 292 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 SRGNP10124 158 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 PLCG2P16885 1265 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 PDE4BQ07343 736 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 TRIM29Q14134 588 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 LTBP1Q14766 1721 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 SLC39A14Q15043 492 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 MAP3K11Q16584 847 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 ZNF827Q17R98 1081 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 MYSM1Q5VVJ2 828 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 ANO1Q5XXA6 986 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 OTUD7BQ6GQQ9 843 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 CATIPQ7Z7H3 387 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 MICU3Q86XE3 530 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 RAB11FIP4Q86YS3 637 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 CCAR1Q8IX12 1150 aaKnown RBP6.46□□□□□ -1.38
NEK3-211ENST00000629912 TRIM22Q8IYM9 498 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 ENAHQ8N8S7 591 aaPredicted RBP6.46□□□□□ -1.38
NEK3-211ENST00000629912 ENGASEQ8NFI3 743 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 KCNG4Q8TDN1 519 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.46□□□□□ -1.38
NEK3-211ENST00000629912 RNF26Q9BY78 433 aaPredicted RBP6.46□□□□□ -1.38
NEK3-211ENST00000629912 COA1Q9GZY4 146 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 NUP62CLQ9H1M0 184 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 TOMM22Q9NS69 142 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 TCP11L1Q9NUJ3 509 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 RBM28Q9NW13 759 aaKnown RBP6.46□□□□□ -1.38
NEK3-211ENST00000629912 DACT1Q9NYF0 836 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 LAMB1P07942 1786 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 TNKSO95271 1327 aa6.46□□□□□ -1.38
NEK3-211ENST00000629912 RGPD3A6NKT7 1758 aaPredicted RBP6.45□□□□□ -1.38
NEK3-211ENST00000629912 RGPD4Q7Z3J3 1758 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 CYP2D7A0A087X1C5 515 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 FAM237AA0A1B0GTK4 181 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 DCAF8L1A6NGE4 600 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 SMIM22K7EJ46 135 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 PPEF1O14829 653 aaPredicted RBP6.45□□□□□ -1.38
NEK3-211ENST00000629912 SPTLC2O15270 562 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 PPP6R2O75170 966 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 NR1I2O75469 434 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 RXRAP19793 462 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 CMA1P23946 247 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 FUT2Q10981 343 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 TROAPQ12815 778 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 SNW1Q13573 536 aaKnown RBP6.45□□□□□ -1.38
NEK3-211ENST00000629912 GRIK5Q16478 980 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 IFIT1BQ5T764 474 aaKnown RBP6.45□□□□□ -1.38
NEK3-211ENST00000629912 DGKHQ86XP1 1220 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 BICD2Q8TD16 824 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 SH3RF3Q8TEJ3 882 aaPredicted RBP6.45□□□□□ -1.38
NEK3-211ENST00000629912 PHKBQ93100 1093 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 MASTLQ96GX5 879 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 ZKSCAN3Q9BRR0 538 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 NOL10Q9BSC4 688 aaKnown RBP6.45□□□□□ -1.38
NEK3-211ENST00000629912 MRIQ9BWK5 157 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 SLC26A6Q9BXS9 759 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 RTFDC1Q9BY42 306 aaPredicted RBP6.45□□□□□ -1.38
NEK3-211ENST00000629912 TNMDQ9H2S6 317 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 FOXP1Q9H334 677 aaPredicted RBP6.45□□□□□ -1.38
NEK3-211ENST00000629912 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.45□□□□□ -1.38
NEK3-211ENST00000629912 MCM9Q9NXL9 1143 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 PCDHA7Q9UN72 937 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 CLIC4Q9Y696 253 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 PARP3Q9Y6F1 533 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 MORC2Q9Y6X9 1032 aaPredicted RBP6.45□□□□□ -1.38
NEK3-211ENST00000629912 MROH7-TTC4A0A0A0MT08 1334 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 GAKO14976 1311 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 CDK5RAP2Q96SN8 1893 aa6.45□□□□□ -1.38
NEK3-211ENST00000629912 ROBO3Q96MS0 1386 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 ECM29Q5VYK3 1845 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 KIF28PB7ZC32 967 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 C6orf229H3BNL8 230 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 PPFIA3O75145 1194 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 MMP1P03956 469 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 POLR3DP05423 398 aaPredicted RBP6.44□□□□□ -1.38
NEK3-211ENST00000629912 USP17L8P0C7I0 530 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 CYP2D6P10635 497 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 USP5P45974 858 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 ME1P48163 572 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 FOSBP53539 338 aa6.44□□□□□ -1.38
NEK3-211ENST00000629912 CEBPZQ03701 1054 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms