RNA–Protein interactions for RNA: ENST00000629289.2

CDK11B-208, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 5 BASIC

Gene CDK11B, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-208ENST00000629289 COL22A1Q8NFW1 1626 aaPredicted RBP19.58■□□□□ 0.73
CDK11B-208ENST00000629289 IPO5O00410 1097 aaKnown RBP19.58■□□□□ 0.73
CDK11B-208ENST00000629289 GNAI3P08754 354 aa19.58■□□□□ 0.73
CDK11B-208ENST00000629289 EIF4BP23588 611 aaKnown RBP19.58■□□□□ 0.73
CDK11B-208ENST00000629289 NBPF15Q8N660 670 aa19.58■□□□□ 0.73
CDK11B-208ENST00000629289 PDHBP11177 359 aa19.58■□□□□ 0.72
CDK11B-208ENST00000629289 HOXC9P31274 260 aa19.58■□□□□ 0.72
CDK11B-208ENST00000629289 TXLNAP40222 546 aa19.58■□□□□ 0.72
CDK11B-208ENST00000629289 OGFOD1Q8N543 542 aa19.58■□□□□ 0.72
CDK11B-208ENST00000629289 TPCN1Q9ULQ1 816 aa19.58■□□□□ 0.72
CDK11B-208ENST00000629289 SYNPO2Q9UMS6 1093 aa19.58■□□□□ 0.72
CDK11B-208ENST00000629289 L1RE1Q9UN81 338 aa19.58■□□□□ 0.72
CDK11B-208ENST00000629289 FANCGO15287 622 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 SMNDC1O75940 238 aaKnown RBP eCLIP19.57■□□□□ 0.72
CDK11B-208ENST00000629289 CCT4P50991 539 aaKnown RBP19.57■□□□□ 0.72
CDK11B-208ENST00000629289 SLC7A5Q01650 507 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 E2F5Q15329 346 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 MICALCLQ6ZW33 695 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 CDC37L1Q7L3B6 337 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 FAM228AQ86W67 206 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 PAPOLBQ9NRJ5 636 aaKnown RBP19.57■□□□□ 0.72
CDK11B-208ENST00000629289 ERICH2A1L162 156 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 M0R2C6 588 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 AMPHP49418 695 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 ZC3H6P61129 1189 aaKnown RBP19.57■□□□□ 0.72
CDK11B-208ENST00000629289 IFT88Q13099 833 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 TSNAXIP1Q2TAA8 658 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 TMC6Q7Z403 805 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 RASEFQ8IZ41 740 aa19.57■□□□□ 0.72
CDK11B-208ENST00000629289 ZNF189O75820 626 aaPredicted RBP19.56■□□□□ 0.72
CDK11B-208ENST00000629289 CCDC40Q4G0X9 1142 aa19.56■□□□□ 0.72
CDK11B-208ENST00000629289 HOOK2Q96ED9 719 aa19.56■□□□□ 0.72
CDK11B-208ENST00000629289 UTP6Q9NYH9 597 aaKnown RBP19.56■□□□□ 0.72
CDK11B-208ENST00000629289 TMEM98Q9Y2Y6 226 aa19.56■□□□□ 0.72
CDK11B-208ENST00000629289 SHTN1A0MZ66 631 aa19.56■□□□□ 0.72
CDK11B-208ENST00000629289 RNF40O75150 1001 aa19.56■□□□□ 0.72
CDK11B-208ENST00000629289 PRPF4BQ13523 1007 aaKnown RBP19.56■□□□□ 0.72
CDK11B-208ENST00000629289 SARM1Q6SZW1 724 aa19.56■□□□□ 0.72
CDK11B-208ENST00000629289 MTHFD1LQ6UB35 978 aa19.56■□□□□ 0.72
CDK11B-208ENST00000629289 BZW1Q7L1Q6 419 aaKnown RBP19.56■□□□□ 0.72
CDK11B-208ENST00000629289 MTA3Q9BTC8 594 aa19.56■□□□□ 0.72
CDK11B-208ENST00000629289 CRB1P82279 1406 aa19.55■□□□□ 0.72
CDK11B-208ENST00000629289 LARGE1O95461 756 aa19.55■□□□□ 0.72
CDK11B-208ENST00000629289 AK2P54819 239 aa19.55■□□□□ 0.72
CDK11B-208ENST00000629289 MTHFSDQ2M296 383 aaKnown RBP19.55■□□□□ 0.72
CDK11B-208ENST00000629289 DDX54Q8TDD1 881 aaKnown RBP19.55■□□□□ 0.72
CDK11B-208ENST00000629289 SMCR8Q8TEV9 937 aaPredicted RBP19.55■□□□□ 0.72
CDK11B-208ENST00000629289 GORASP1Q9BQQ3 440 aa19.55■□□□□ 0.72
CDK11B-208ENST00000629289 COL18A1P39060 1754 aa19.55■□□□□ 0.72
CDK11B-208ENST00000629289 KIAA0754O94854 1291 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 ZSCAN22P10073 491 aaPredicted RBP19.54■□□□□ 0.72
CDK11B-208ENST00000629289 HSPA4P34932 840 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 IP6K1Q92551 441 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 SUGCTQ9HAC7 445 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 CHMP3Q9Y3E7 222 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 USP5P45974 858 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 PPP2R3AQ06190 1150 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 TRIM65Q6PJ69 517 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 RUFY3Q7L099 469 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 CCDC50Q8IVM0 306 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 PARP9Q8IXQ6 854 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 KCNN1Q92952 543 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 ZCWPW1Q9H0M4 648 aa19.54■□□□□ 0.72
CDK11B-208ENST00000629289 CORO1CQ9ULV4 474 aaPredicted RBP19.54■□□□□ 0.72
CDK11B-208ENST00000629289 A0A1B0GVG6 124 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 STX6O43752 255 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 FERP16591 822 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 ATP8B2P98198 1209 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 G3BP1Q13283 466 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDK11B-208ENST00000629289 TMEM110Q86TL2 294 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 BCAS4Q8TDM0 211 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 GOLGA1Q92805 767 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 CUL5Q93034 780 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 TBC1D7Q9P0N9 293 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 SNX14Q9Y5W7 946 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 CPDO75976 1380 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 RGPD5Q99666 1765 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 MEFVO15553 781 aaPredicted RBP19.53■□□□□ 0.72
CDK11B-208ENST00000629289 ZNF165P49910 485 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 IRAK1P51617 712 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 FLIIQ13045 1269 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 MIPOL1Q8TD10 442 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 SPG7Q9UQ90 795 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 TUBGCP6Q96RT7 1819 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 SYNRGQ9UMZ2 1314 aa19.53■□□□□ 0.72
CDK11B-208ENST00000629289 DNM1Q05193 864 aaKnown RBP19.52■□□□□ 0.72
CDK11B-208ENST00000629289 FAM114A1Q8IWE2 563 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 SLC40A1Q9NP59 571 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 TRPC6Q9Y210 931 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 AXIN2Q9Y2T1 843 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 RGPD1P0DJD0 1748 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 F8VZ95 297 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 CYP27B1O15528 508 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 SLC8A1P32418 973 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 CASP8Q14790 479 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 CAMK4Q16566 473 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 TRIM58Q8NG06 486 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 EYA1Q99502 592 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 UBA5Q9GZZ9 404 aa19.52■□□□□ 0.72
CDK11B-208ENST00000629289 VCPKMTQ9H867 229 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms