RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
APLF-207ENST00000627740 PCP11498 1178 aaKnown RBP11.76□□□□□ -0.53
APLF-207ENST00000627740 ANAPC15P60006 121 aa11.76□□□□□ -0.53
APLF-207ENST00000627740 CTDSPL2Q05D32 466 aa11.76□□□□□ -0.53
APLF-207ENST00000627740 PDE4BQ07343 736 aa11.76□□□□□ -0.53
APLF-207ENST00000627740 KRT32Q14532 448 aa11.76□□□□□ -0.53
APLF-207ENST00000627740 FOXP4Q8IVH2 680 aaPredicted RBP11.76□□□□□ -0.53
APLF-207ENST00000627740 KCNB2Q92953 911 aa11.76□□□□□ -0.53
APLF-207ENST00000627740 TEPSINQ96N21 525 aa11.76□□□□□ -0.53
APLF-207ENST00000627740 SWAP70Q9UH65 585 aa11.76□□□□□ -0.53
APLF-207ENST00000627740 TSGA10IPQ3SY00 556 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 SUPT20HL1Q3ZLR7 823 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 AKNAD1Q5T1N1 836 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 MFSD6Q6ZSS7 791 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 USP48Q86UV5 1035 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 HERC5Q9UII4 1024 aaKnown RBP11.75□□□□□ -0.53
APLF-207ENST00000627740 ADM5C9JUS6 153 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 RBM25P49756 843 aaKnown RBP11.75□□□□□ -0.53
APLF-207ENST00000627740 TRDNQ13061 729 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 MAP1SQ66K74 1059 aaPredicted RBP11.75□□□□□ -0.53
APLF-207ENST00000627740 C16orf86Q6ZW13 317 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 METTL16Q86W50 562 aaKnown RBP11.75□□□□□ -0.53
APLF-207ENST00000627740 STAG1Q8WVM7 1258 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 CNNM2Q9H8M5 875 aa11.75□□□□□ -0.53
APLF-207ENST00000627740 TRPM7Q96QT4 1865 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 E7EWF7 191 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 TBC1D12O60347 775 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 NF2P35240 595 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 NT5C2P49902 561 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 GABPAQ06546 454 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 NBPF12Q5TAG4 269 aaPredicted RBP11.74□□□□□ -0.53
APLF-207ENST00000627740 DCAF15Q66K64 600 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 TBC1D10CQ8IV04 446 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 DYNLL2Q96FJ2 89 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 TBC1D32Q96NH3 1257 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 GLIS2Q9BZE0 524 aaPredicted RBP11.74□□□□□ -0.53
APLF-207ENST00000627740 MKNK2Q9HBH9 465 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 SNX14Q9Y5W7 946 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 FGRP09769 529 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 CDK8P49336 464 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 EVX2Q03828 476 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 CDAN1Q8IWY9 1227 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 STK11IPQ8N1F8 1099 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 CDCA5Q96FF9 252 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 KRT23Q9C075 422 aa11.74□□□□□ -0.53
APLF-207ENST00000627740 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.74□□□□□ -0.53
APLF-207ENST00000627740 ATAD5Q96QE3 1844 aa11.73□□□□□ -0.53
APLF-207ENST00000627740 SMIM22K7EJ46 135 aa11.73□□□□□ -0.53
APLF-207ENST00000627740 KIF3CO14782 793 aa11.73□□□□□ -0.53
APLF-207ENST00000627740 ORC4O43929 436 aa11.73□□□□□ -0.53
APLF-207ENST00000627740 MAP3K10Q02779 954 aa11.73□□□□□ -0.53
APLF-207ENST00000627740 PRAMEF18Q5VWM3 479 aa11.73□□□□□ -0.53
APLF-207ENST00000627740 RALYLQ86SE5 291 aaKnown RBP11.73□□□□□ -0.53
APLF-207ENST00000627740 NCOA7Q8NI08 942 aa11.73□□□□□ -0.53
APLF-207ENST00000627740 TOMM22Q9NS69 142 aa11.73□□□□□ -0.53
APLF-207ENST00000627740 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
APLF-207ENST00000627740 PSMA5P28066 241 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 ZNF784Q8NCA9 323 aaPredicted RBP11.72□□□□□ -0.53
APLF-207ENST00000627740 IL17RAQ96F46 866 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 TAF6LQ9Y6J9 622 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 NEDD4P46934 1319 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 HMGB1P09429 215 aaKnown RBP11.72□□□□□ -0.53
APLF-207ENST00000627740 SHMT1P34896 483 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 RRP12Q5JTH9 1297 aaKnown RBP11.72□□□□□ -0.53
APLF-207ENST00000627740 TATDN1Q6P1N9 297 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 STOX1Q6ZVD7 989 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 MIGA2Q7L4E1 593 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 ZNF444Q8N0Y2 327 aaPredicted RBP11.72□□□□□ -0.53
APLF-207ENST00000627740 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 ESR2Q92731 530 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 JAKMIP1Q96N16 626 aaKnown RBP11.72□□□□□ -0.53
APLF-207ENST00000627740 NEK1Q96PY6 1258 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 ZNF341Q9BYN7 854 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 SSC5DA1L4H1 1573 aa11.72□□□□□ -0.53
APLF-207ENST00000627740 FAM196BA6NMK8 535 aa11.71□□□□□ -0.53
APLF-207ENST00000627740 PPP1R12BO60237 982 aaPredicted RBP11.71□□□□□ -0.53
APLF-207ENST00000627740 RANBP6O60518 1105 aaKnown RBP11.71□□□□□ -0.53
APLF-207ENST00000627740 PRDM1O75626 825 aa11.71□□□□□ -0.53
APLF-207ENST00000627740 CERKLQ49MI3 558 aaPredicted RBP11.71□□□□□ -0.53
APLF-207ENST00000627740 SMC1BQ8NDV3 1235 aa11.71□□□□□ -0.53
APLF-207ENST00000627740 TM6SF1Q9BZW5 370 aa11.71□□□□□ -0.53
APLF-207ENST00000627740 DOCK1Q14185 1865 aa11.71□□□□□ -0.53
APLF-207ENST00000627740 B4E1Z4 1266 aa11.71□□□□□ -0.54
APLF-207ENST00000627740 RASA1P20936 1047 aa11.71□□□□□ -0.54
APLF-207ENST00000627740 ADCK5Q3MIX3 580 aa11.71□□□□□ -0.54
APLF-207ENST00000627740 RBM46Q8TBY0 533 aaKnown RBP11.71□□□□□ -0.54
APLF-207ENST00000627740 CCDC17Q96LX7 622 aa11.71□□□□□ -0.54
APLF-207ENST00000627740 INCENPQ9NQS7 918 aa11.71□□□□□ -0.54
APLF-207ENST00000627740 TACC3Q9Y6A5 838 aa11.71□□□□□ -0.54
APLF-207ENST00000627740 GREB1LQ9C091 1923 aaPredicted RBP11.71□□□□□ -0.54
APLF-207ENST00000627740 OTOFQ9HC10 1997 aa11.71□□□□□ -0.54
APLF-207ENST00000627740 PAPPA2Q9BXP8 1791 aa11.7□□□□□ -0.54
APLF-207ENST00000627740 TRAF5O00463 557 aa11.7□□□□□ -0.54
APLF-207ENST00000627740 TOMM70O94826 608 aa11.7□□□□□ -0.54
APLF-207ENST00000627740 CASTP20810 708 aaKnown RBP11.7□□□□□ -0.54
APLF-207ENST00000627740 MCM5P33992 734 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms