RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 PAK1Q13153 545 aa14.32□□□□□ -0.12
SCN8A-209ENST00000627620 CCDC14Q49A88 953 aa14.32□□□□□ -0.12
SCN8A-209ENST00000627620 CYP26C1Q6V0L0 522 aa14.32□□□□□ -0.12
SCN8A-209ENST00000627620 KRT25Q7Z3Z0 450 aa14.32□□□□□ -0.12
SCN8A-209ENST00000627620 SHANK2Q9UPX8 1470 aa14.32□□□□□ -0.12
SCN8A-209ENST00000627620 KRT9P35527 623 aa14.32□□□□□ -0.12
SCN8A-209ENST00000627620 STRN3Q13033 797 aa14.32□□□□□ -0.12
SCN8A-209ENST00000627620 SNX29Q8TEQ0 813 aa14.32□□□□□ -0.12
SCN8A-209ENST00000627620 EXOC7Q9UPT5 735 aa14.32□□□□□ -0.12
SCN8A-209ENST00000627620 FANCCQ00597 558 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 INF2Q27J81 1249 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 RBSNQ9H1K0 784 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 AGTPBP1Q9UPW5 1226 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 IBTKQ9P2D0 1353 aaPredicted RBP14.31□□□□□ -0.12
SCN8A-209ENST00000627620 TRPC3Q13507 836 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 PPP2R5BQ15173 497 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 ASIC2Q16515 512 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 KRT40Q6A162 431 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 NBPF11Q86T75 865 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 MAPKAPK5Q8IW41 473 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 LARGE2Q8N3Y3 721 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 ZNF496Q96IT1 587 aaPredicted RBP14.31□□□□□ -0.12
SCN8A-209ENST00000627620 H0YIN7 160 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 DDX39AO00148 427 aaKnown RBP14.31□□□□□ -0.12
SCN8A-209ENST00000627620 PPP2R3AQ06190 1150 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 SPATA24Q86W54 205 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 MLKLQ8NB16 471 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 NAP1L3Q99457 506 aaPredicted RBP14.31□□□□□ -0.12
SCN8A-209ENST00000627620 KIAA0556O60303 1618 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 FAM98CQ17RN3 349 aaKnown RBP14.31□□□□□ -0.12
SCN8A-209ENST00000627620 MAEAQ7L5Y9 396 aa14.31□□□□□ -0.12
SCN8A-209ENST00000627620 EBAG9O00559 213 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 ZNF202O95125 648 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 SLC8A3P57103 927 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 EVCP57679 992 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 NAPGQ99747 312 aaPredicted RBP14.3□□□□□ -0.12
SCN8A-209ENST00000627620 DKC1O60832 514 aaKnown RBP eCLIP14.3□□□□□ -0.12
SCN8A-209ENST00000627620 HDXQ7Z353 690 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 BIN2Q9UBW5 565 aaPredicted RBP14.3□□□□□ -0.12
SCN8A-209ENST00000627620 TTF2Q9UNY4 1162 aaKnown RBP14.3□□□□□ -0.12
SCN8A-209ENST00000627620 STK24Q9Y6E0 443 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 CSRNP2Q9H175 543 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 NOP56O00567 594 aaKnown RBP14.3□□□□□ -0.12
SCN8A-209ENST00000627620 PSMC4P43686 418 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 EIF4A1P60842 406 aaKnown RBP14.3□□□□□ -0.12
SCN8A-209ENST00000627620 TCP10Q12799 353 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 USH1GQ495M9 461 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 HERC4Q5GLZ8 1057 aaPredicted RBP14.3□□□□□ -0.12
SCN8A-209ENST00000627620 GPATCH11Q8N954 259 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 TGFBRAP1Q8WUH2 860 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 KCNJ14Q9UNX9 436 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 NPC1L1Q9UHC9 1359 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 DYMQ7RTS9 669 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 KIFC2Q96AC6 838 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 LZTS2Q9BRK4 669 aa14.3□□□□□ -0.12
SCN8A-209ENST00000627620 ERCC5P28715 1186 aaPredicted RBP14.29□□□□□ -0.12
SCN8A-209ENST00000627620 MAP7D1Q3KQU3 841 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 LIN9Q5TKA1 542 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 CCDC117Q8IWD4 279 aaPredicted RBP14.29□□□□□ -0.12
SCN8A-209ENST00000627620 CPXCR1Q8N123 301 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 PLCD3Q8N3E9 789 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 GPR161Q8N6U8 529 aaKnown RBP14.29□□□□□ -0.12
SCN8A-209ENST00000627620 FAM76AQ8TAV0 307 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 DNM3Q9UQ16 869 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 NOD1Q9Y239 953 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 NLRP12P59046 1061 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 SAMD15Q9P1V8 674 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.29□□□□□ -0.12
SCN8A-209ENST00000627620 RNASE9P60153 205 aaKnown RBP14.29□□□□□ -0.12
SCN8A-209ENST00000627620 CALCRLQ16602 461 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 UIMC1Q96RL1 719 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 GINS2Q9Y248 185 aa14.29□□□□□ -0.12
SCN8A-209ENST00000627620 ZBED4O75132 1171 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 ARID4AP29374 1257 aaPredicted RBP14.28□□□□□ -0.12
SCN8A-209ENST00000627620 UAP1Q16222 522 aaPredicted RBP14.28□□□□□ -0.12
SCN8A-209ENST00000627620 BRDTQ58F21 947 aaPredicted RBP14.28□□□□□ -0.12
SCN8A-209ENST00000627620 UTP14CQ5TAP6 766 aaKnown RBP14.28□□□□□ -0.12
SCN8A-209ENST00000627620 CDC37L1Q7L3B6 337 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 NUP58Q9BVL2 599 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 ZNF408Q9H9D4 720 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 TBC1D7Q9P0N9 293 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 ALDH3A1P30838 453 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 TFAP4Q01664 338 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 RASA3Q14644 834 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 FAM204AQ9H8W3 233 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 CBX8Q9HC52 389 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 hCG_1642624A0A1W2PR95 340 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 E7EWF7 191 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 SNX16P57768 344 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 CFAP157Q5JU67 520 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 DDX23Q9BUQ8 820 aaKnown RBP14.28□□□□□ -0.12
SCN8A-209ENST00000627620 IVNS1ABPQ9Y6Y0 642 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 DTNBO60941 627 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 MICALL1Q8N3F8 863 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 RNF34Q969K3 372 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 TRIM7Q9C029 511 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 WDR62O43379 1518 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 E7EVH7 732 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 JAK2O60674 1132 aa14.28□□□□□ -0.12
SCN8A-209ENST00000627620 GAS8O95995 478 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms