RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 GPR75-ASB3A0A0A6YYF3 556 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 CCDC196A0A1B0GTZ2 297 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 PFKFB2O60825 505 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 GTF2IP78347 998 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 ME3Q16798 604 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 SKOR2Q2VWA4 1001 aaPredicted RBP10.14□□□□□ -0.79
CHD2-211ENST00000627460 HHIPL2Q6UWX4 724 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 STOX1Q6ZVD7 989 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 CCDC83Q8IWF9 413 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 C7orf43Q8WVR3 580 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 UBAC1Q9BSL1 405 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 EPB41L4AQ9HCS5 686 aaPredicted RBP10.14□□□□□ -0.79
CHD2-211ENST00000627460 AATFQ9NY61 560 aaKnown RBP eCLIP10.14□□□□□ -0.79
CHD2-211ENST00000627460 TPCN1Q9ULQ1 816 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 CD2APQ9Y5K6 639 aa10.14□□□□□ -0.79
CHD2-211ENST00000627460 USP17L3A6NCW0 530 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 USP17L4A6NCW7 530 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 CCDC69A6NI79 296 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 WTIPA6NIX2 430 aaPredicted RBP10.13□□□□□ -0.79
CHD2-211ENST00000627460 CPLX1O14810 134 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 RIMBP2O15034 1052 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 ORC4O43929 436 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 CPA1P15085 419 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 PPP4R3BQ5MIZ7 849 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 USP17L1Q7RTZ2 530 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 SGMS1Q86VZ5 419 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 GPIHBP1Q8IV16 184 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 FAM184AQ8NB25 1140 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 TEKT1Q969V4 418 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 DCBLD2Q96PD2 775 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 DCP1AQ9NPI6 582 aaPredicted RBP10.13□□□□□ -0.79
CHD2-211ENST00000627460 TOMM22Q9NS69 142 aa10.13□□□□□ -0.79
CHD2-211ENST00000627460 CHD4Q14839 1912 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 POTEFA5A3E0 1075 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 MINDY4BA8MYZ0 360 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 STX6O43752 255 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 ECE2O60344 883 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 BRD1O95696 1058 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 FGRP09769 529 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 CALM1P0DP23 149 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 CALM2P0DP24 149 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 CALM3P0DP25 149 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 GJB2P29033 226 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 CHRNA5P30532 468 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 MCM4P33991 863 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 BTDP43251 543 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 DALRD3Q5D0E6 543 aaKnown RBP10.12□□□□□ -0.79
CHD2-211ENST00000627460 TMEM67Q5HYA8 995 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 NFXL1Q6ZNB6 911 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 ADGRA1Q86SQ6 560 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 TTC6Q86TZ1 520 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 TBC1D10CQ8IV04 446 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 SDR42E1Q8WUS8 393 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 SLC39A7Q92504 469 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 TNPO1Q92973 898 aaKnown RBP10.12□□□□□ -0.79
CHD2-211ENST00000627460 FBXW7Q969H0 707 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 MCM9Q9NXL9 1143 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 HDAC9Q9UKV0 1011 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 ROBO3Q96MS0 1386 aa10.12□□□□□ -0.79
CHD2-211ENST00000627460 LAMB1P07942 1786 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 KLF18A0A0U1RQI7 1052 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 GOLGA8BA8MQT2 603 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 B4E1Z4 1266 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 USP17L12C9JPN9 530 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 USP17L21D6R901 530 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 SH2B2O14492 632 aaPredicted RBP10.11□□□□□ -0.79
CHD2-211ENST00000627460 IFIT3O14879 490 aaKnown RBP10.11□□□□□ -0.79
CHD2-211ENST00000627460 PPIP5K2O43314 1243 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 PRKAB2O43741 272 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 KDM4AO75164 1064 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 C7P10643 843 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 PDIA3P30101 505 aaKnown RBP10.11□□□□□ -0.79
CHD2-211ENST00000627460 DYNLL1P63167 89 aaKnown RBP10.11□□□□□ -0.79
CHD2-211ENST00000627460 WTAPQ15007 396 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 LARP1BQ659C4 914 aaKnown RBP10.11□□□□□ -0.79
CHD2-211ENST00000627460 CTR9Q6PD62 1173 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 TEX11Q8IYF3 940 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 ZNF384Q8TF68 577 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 WASF1Q92558 559 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 UPF1Q92900 1129 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHD2-211ENST00000627460 SERPINA10Q9UK55 444 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 NAP1L2Q9ULW6 460 aaPredicted RBP10.11□□□□□ -0.79
CHD2-211ENST00000627460 TTF2Q9UNY4 1162 aaKnown RBP10.11□□□□□ -0.79
CHD2-211ENST00000627460 SLC12A7Q9Y666 1083 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 TAF6LQ9Y6J9 622 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 SLX4Q8IY92 1834 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 MYH2Q9UKX2 1941 aa10.11□□□□□ -0.79
CHD2-211ENST00000627460 SNED1Q8TER0 1413 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 ZBTB43O43298 467 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 C21orf2O43822 256 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 POLR3DP05423 398 aaPredicted RBP10.1□□□□□ -0.79
CHD2-211ENST00000627460 ZSCAN22P10073 491 aaPredicted RBP10.1□□□□□ -0.79
CHD2-211ENST00000627460 DPEP1P16444 411 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 NCLP19338 710 aaKnown RBP10.1□□□□□ -0.79
CHD2-211ENST00000627460 METAP2P50579 478 aaKnown RBP eCLIP10.1□□□□□ -0.796e-7■□□□□ 11
CHD2-211ENST00000627460 MAP3K9P80192 1104 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 APOBRQ0VD83 1088 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 C12orf60Q5U649 245 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 NIM1KQ8IY84 436 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms