RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 MXD3Q9BW11 206 aa8.87□□□□□ -0.99
PTP4A1-206ENST00000627002 LRRC2Q9BYS8 371 aa8.87□□□□□ -0.99
PTP4A1-206ENST00000627002 KCNQ5Q9NR82 932 aa8.87□□□□□ -0.99
PTP4A1-206ENST00000627002 TOMM22Q9NS69 142 aa8.87□□□□□ -0.99
PTP4A1-206ENST00000627002 ANGEL1Q9UNK9 670 aaKnown RBP8.87□□□□□ -0.99
PTP4A1-206ENST00000627002 SMC3Q9UQE7 1217 aa8.87□□□□□ -0.99
PTP4A1-206ENST00000627002 ROBO3Q96MS0 1386 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 FLT1P17948 1338 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 CCDC88AQ3V6T2 1871 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 CYP2D7A0A087X1C5 515 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 IFIT3O14879 490 aaKnown RBP8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 USP17L8P0C7I0 530 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 LIFRP42702 1097 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 APOBRQ0VD83 1088 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 TNIP1Q15025 636 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 RAB3GAP1Q15042 981 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 TMEM67Q5HYA8 995 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 RRP12Q5JTH9 1297 aaKnown RBP8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 APOBEC3HQ6NTF7 200 aaKnown RBP8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 MAPKAPK5Q8IW41 473 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 AGBL3Q8NEM8 1001 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 IGDCC4Q8TDY8 1250 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 UBAC1Q9BSL1 405 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 USP40Q9NVE5 1235 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 ZSWIM5Q9P217 1185 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 HDAC9Q9UKV0 1011 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 TAOK2Q9UL54 1235 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 TACC3Q9Y6A5 838 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 LAMA4Q16363 1823 aa8.86□□□□□ -0.99
PTP4A1-206ENST00000627002 KLF18A0A0U1RQI7 1052 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 CCDC69A6NI79 296 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 NFKBIEO00221 500 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 PSMD14O00487 310 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 GALR2O43603 387 aaPredicted RBP8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 DHX16O60231 1041 aaKnown RBP8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 RAD17O75943 681 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 CYP2D6P10635 497 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 PDCP20941 246 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 PDIA3P30101 505 aaKnown RBP8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 RBM5P52756 815 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 STK3Q13188 491 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 CCDC178Q5BJE1 867 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 CIAPIN1Q6FI81 312 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 CDC42EP5Q6NZY7 148 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 SYNE3Q6ZMZ3 975 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 NFXL1Q6ZNB6 911 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 TTC6Q86TZ1 520 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 SGMS1Q86VZ5 419 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 IQCA1Q86XH1 822 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 NECAB1Q8N987 351 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 ZNF526Q8TF50 670 aaPredicted RBP8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 LY9Q9HBG7 655 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 INCENPQ9NQS7 918 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 NAP1L2Q9ULW6 460 aaPredicted RBP8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 KIF3AQ9Y496 699 aa8.85□□□□□ -0.99
PTP4A1-206ENST00000627002 GOLGA8BA8MQT2 603 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 RANBP6O60518 1105 aaKnown RBP8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 WDHD1O75717 1129 aaPredicted RBP8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 HLA-DOAP06340 250 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 RPS12P25398 132 aaKnown RBP8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 GJB2P29033 226 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 RCAN1P53805 252 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 HMGN5P82970 282 aaKnown RBP8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 ST3GAL1Q11201 340 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 SCRN1Q12765 414 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 WTAPQ15007 396 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 CFAP100Q494V2 611 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 C16orf86Q6ZW13 317 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 STK11IPQ8N1F8 1099 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 ZSCAN10Q96SZ4 725 aaPredicted RBP8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 GMLQ99445 158 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 IDI2Q9BXS1 227 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 OSBPL5Q9H0X9 879 aaPredicted RBP8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 DHX36Q9H2U1 1008 aaKnown RBP8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 MKNK2Q9HBH9 465 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 SAP30BPQ9UHR5 308 aaKnown RBP8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 SLC12A7Q9Y666 1083 aa8.84□□□□□ -0.99
PTP4A1-206ENST00000627002 WDR33Q9C0J8 1336 aaKnown RBP8.83□□□□□ -1
PTP4A1-206ENST00000627002 TSPY2A6NKD2 308 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 ZBTB43O43298 467 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 CDKL5O76039 1030 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 BRD1O95696 1058 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 METAP2P50579 478 aaKnown RBP eCLIP8.83□□□□□ -1
PTP4A1-206ENST00000627002 PLCD1P51178 756 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 EIF6P56537 245 aaKnown RBP8.83□□□□□ -1
PTP4A1-206ENST00000627002 CXCL9Q07325 125 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 PICALMQ13492 652 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 DLGAP5Q15398 846 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 CPLX2Q6PUV4 134 aaKnown RBP8.83□□□□□ -1
PTP4A1-206ENST00000627002 APOA5Q6Q788 366 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 ZNF444Q8N0Y2 327 aaPredicted RBP8.83□□□□□ -1
PTP4A1-206ENST00000627002 MTMR14Q8NCE2 650 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 GBP4Q96PP9 640 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 GPHNQ9NQX3 736 aaPredicted RBP8.83□□□□□ -1
PTP4A1-206ENST00000627002 TMOD2Q9NZR1 351 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 SWAP70Q9UH65 585 aa8.83□□□□□ -1
PTP4A1-206ENST00000627002 BRPF3Q9ULD4 1205 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms