RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 U2AF1L4Q8WU68 220 aaKnown RBP17.81■□□□□ 0.44
TUBB3-215ENST00000625617 NOL10Q9BSC4 688 aaKnown RBP17.81■□□□□ 0.44
TUBB3-215ENST00000625617 HTATIP2Q9BUP3 242 aa17.81■□□□□ 0.44
TUBB3-215ENST00000625617 TBC1D2Q9BYX2 928 aa17.81■□□□□ 0.44
TUBB3-215ENST00000625617 BCAR3O75815 825 aa17.8■□□□□ 0.44
TUBB3-215ENST00000625617 FAM110CQ1W6H9 321 aa17.8■□□□□ 0.44
TUBB3-215ENST00000625617 UBE2Q1Q7Z7E8 422 aa17.8■□□□□ 0.44
TUBB3-215ENST00000625617 ANKRD13CQ8N6S4 541 aa17.8■□□□□ 0.44
TUBB3-215ENST00000625617 ZNF280CQ8ND82 737 aa17.8■□□□□ 0.44
TUBB3-215ENST00000625617 DPF3Q92784 378 aa17.8■□□□□ 0.44
TUBB3-215ENST00000625617 UNC93B1Q9H1C4 597 aa17.8■□□□□ 0.44
TUBB3-215ENST00000625617 FARP2O94887 1054 aaPredicted RBP17.79■□□□□ 0.44
TUBB3-215ENST00000625617 INHAP05111 366 aa17.79■□□□□ 0.44
TUBB3-215ENST00000625617 ELNP15502 786 aa17.79■□□□□ 0.44
TUBB3-215ENST00000625617 SPP2Q13103 211 aa17.79■□□□□ 0.44
TUBB3-215ENST00000625617 IRF5Q13568 498 aa17.79■□□□□ 0.44
TUBB3-215ENST00000625617 PXYLP1Q8TE99 480 aa17.79■□□□□ 0.44
TUBB3-215ENST00000625617 COA7Q96BR5 231 aa17.79■□□□□ 0.44
TUBB3-215ENST00000625617 HERC5Q9UII4 1024 aaKnown RBP17.79■□□□□ 0.44
TUBB3-215ENST00000625617 TAOK2Q9UL54 1235 aa17.79■□□□□ 0.44
TUBB3-215ENST00000625617 CAP2P40123 477 aa17.78■□□□□ 0.44
TUBB3-215ENST00000625617 HMGCS2P54868 508 aa17.78■□□□□ 0.44
TUBB3-215ENST00000625617 PABPC4Q13310 644 aaKnown RBP eCLIP17.78■□□□□ 0.44
TUBB3-215ENST00000625617 OS9Q13438 667 aaPredicted RBP17.78■□□□□ 0.44
TUBB3-215ENST00000625617 TTC39AQ5SRH9 613 aa17.78■□□□□ 0.44
TUBB3-215ENST00000625617 NAA16Q6N069 864 aaPredicted RBP17.78■□□□□ 0.44
TUBB3-215ENST00000625617 CHRDL2Q6WN34 429 aa17.78■□□□□ 0.44
TUBB3-215ENST00000625617 SH3RF3Q8TEJ3 882 aaPredicted RBP17.78■□□□□ 0.44
TUBB3-215ENST00000625617 USP17L5A8MUK1 530 aa17.77■□□□□ 0.44
TUBB3-215ENST00000625617 BAG3O95817 575 aa17.77■□□□□ 0.44
TUBB3-215ENST00000625617 PLCG2P16885 1265 aa17.77■□□□□ 0.44
TUBB3-215ENST00000625617 GCLCP48506 637 aaPredicted RBP17.77■□□□□ 0.44
TUBB3-215ENST00000625617 TNNI3KQ59H18 835 aa17.77■□□□□ 0.44
TUBB3-215ENST00000625617 TMEM57Q8N5G2 664 aa17.77■□□□□ 0.44
TUBB3-215ENST00000625617 AS3MTQ9HBK9 375 aa17.77■□□□□ 0.44
TUBB3-215ENST00000625617 GPR108Q9NPR9 543 aa17.77■□□□□ 0.44
TUBB3-215ENST00000625617 SNRKQ9NRH2 765 aa17.77■□□□□ 0.44
TUBB3-215ENST00000625617 AATFQ9NY61 560 aaKnown RBP eCLIP17.77■□□□□ 0.44
TUBB3-215ENST00000625617 FPGT-TNNI3KV9GXZ4 949 aa17.77■□□□□ 0.44
TUBB3-215ENST00000625617 PTPRFP10586 1907 aa17.76■□□□□ 0.43
TUBB3-215ENST00000625617 SGPL1O95470 568 aa17.76■□□□□ 0.43
TUBB3-215ENST00000625617 POLA2Q14181 598 aa17.76■□□□□ 0.43
TUBB3-215ENST00000625617 CCDC158Q5M9N0 1113 aa17.76■□□□□ 0.43
TUBB3-215ENST00000625617 ZKSCAN2Q63HK3 967 aa17.76■□□□□ 0.43
TUBB3-215ENST00000625617 DBNDD2Q9BQY9 259 aa17.76■□□□□ 0.43
TUBB3-215ENST00000625617 DHX36Q9H2U1 1008 aaKnown RBP17.76■□□□□ 0.43
TUBB3-215ENST00000625617 PI4KBQ9UBF8 816 aa17.76■□□□□ 0.43
TUBB3-215ENST00000625617 MAST2Q6P0Q8 1798 aa17.76■□□□□ 0.43
TUBB3-215ENST00000625617 PHIPQ8WWQ0 1821 aa17.75■□□□□ 0.43
TUBB3-215ENST00000625617 RRP1BQ14684 758 aaKnown RBP17.75■□□□□ 0.43
TUBB3-215ENST00000625617 DEFB118Q96PH6 123 aa17.75■□□□□ 0.43
TUBB3-215ENST00000625617 ASCC2Q9H1I8 757 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-215ENST00000625617 NR2E3Q9Y5X4 410 aa17.75■□□□□ 0.43
TUBB3-215ENST00000625617 FLT1P17948 1338 aa17.74■□□□□ 0.43
TUBB3-215ENST00000625617 LOC285556D6RIA3 1793 aa17.74■□□□□ 0.43
TUBB3-215ENST00000625617 ASNSP08243 561 aa17.74■□□□□ 0.43
TUBB3-215ENST00000625617 CAPN2P17655 700 aa17.74■□□□□ 0.43
TUBB3-215ENST00000625617 MTMR2Q13614 643 aa17.74■□□□□ 0.43
TUBB3-215ENST00000625617 SH3D19Q5HYK7 790 aa17.74■□□□□ 0.43
TUBB3-215ENST00000625617 MAPKAPK5Q8IW41 473 aa17.74■□□□□ 0.43
TUBB3-215ENST00000625617 SSH3Q8TE77 659 aa17.74■□□□□ 0.43
TUBB3-215ENST00000625617 TGFBRAP1Q8WUH2 860 aa17.74■□□□□ 0.43
TUBB3-215ENST00000625617 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
TUBB3-215ENST00000625617 PAK6Q9NQU5 681 aaPredicted RBP17.74■□□□□ 0.43
TUBB3-215ENST00000625617 SURF6O75683 361 aaKnown RBP17.73■□□□□ 0.43
TUBB3-215ENST00000625617 IRX3P78415 501 aaPredicted RBP17.73■□□□□ 0.43
TUBB3-215ENST00000625617 FTSJ3Q8IY81 847 aaKnown RBP17.73■□□□□ 0.43
TUBB3-215ENST00000625617 CRACR2BQ8N4Y2 399 aaPredicted RBP17.73■□□□□ 0.43
TUBB3-215ENST00000625617 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
TUBB3-215ENST00000625617 TMOD4Q9NZQ9 345 aa17.73■□□□□ 0.43
TUBB3-215ENST00000625617 MGAMO43451 1857 aa17.73■□□□□ 0.43
TUBB3-215ENST00000625617 CEP290O15078 2479 aa17.72■□□□□ 0.43
TUBB3-215ENST00000625617 TFRCP02786 760 aaKnown RBP17.72■□□□□ 0.43
TUBB3-215ENST00000625617 HMGCRP04035 888 aa17.72■□□□□ 0.43
TUBB3-215ENST00000625617 CYP2E1P05181 493 aaPredicted RBP17.72■□□□□ 0.43
TUBB3-215ENST00000625617 PPP4CP60510 307 aa17.72■□□□□ 0.43
TUBB3-215ENST00000625617 ADGRA1Q86SQ6 560 aa17.72■□□□□ 0.43
TUBB3-215ENST00000625617 ZNF512BQ96KM6 892 aaPredicted RBP17.72■□□□□ 0.43
TUBB3-215ENST00000625617 WDR18Q9BV38 432 aa17.72■□□□□ 0.43
TUBB3-215ENST00000625617 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.72■□□□□ 0.438e-7■■■■□ 24.2
TUBB3-215ENST00000625617 DNAJC18Q9H819 358 aa17.72■□□□□ 0.43
TUBB3-215ENST00000625617 RBM27Q9P2N5 1060 aaKnown RBP17.72■□□□□ 0.43
TUBB3-215ENST00000625617 TRIOBPQ9H2D6 2365 aa17.71■□□□□ 0.43
TUBB3-215ENST00000625617 IGSF3O75054 1194 aa17.71■□□□□ 0.43
TUBB3-215ENST00000625617 ZAP70P43403 619 aa17.71■□□□□ 0.43
TUBB3-215ENST00000625617 BACE1P56817 501 aa17.71■□□□□ 0.43
TUBB3-215ENST00000625617 ATP8B2P98198 1209 aa17.71■□□□□ 0.43
TUBB3-215ENST00000625617 ITPRIPQ8IWB1 547 aa17.71■□□□□ 0.43
TUBB3-215ENST00000625617 MORF4L1Q9UBU8 362 aa17.71■□□□□ 0.43
TUBB3-215ENST00000625617 ZBTB7BO15156 539 aaPredicted RBP17.7■□□□□ 0.42
TUBB3-215ENST00000625617 EVI5O60447 810 aa17.7■□□□□ 0.42
TUBB3-215ENST00000625617 HLA-DOAP06340 250 aa17.7■□□□□ 0.42
TUBB3-215ENST00000625617 METTL16Q86W50 562 aaKnown RBP17.7■□□□□ 0.42
TUBB3-215ENST00000625617 FOXP4Q8IVH2 680 aaPredicted RBP17.7■□□□□ 0.42
TUBB3-215ENST00000625617 CRISPLD2Q9H0B8 497 aa17.7■□□□□ 0.42
TUBB3-215ENST00000625617 PIH1D3Q9NQM4 214 aaKnown RBP17.7■□□□□ 0.42
TUBB3-215ENST00000625617 GINM1Q9NU53 330 aa17.7■□□□□ 0.42
TUBB3-215ENST00000625617 TLR7Q9NYK1 1049 aaKnown RBP17.7■□□□□ 0.42
TUBB3-215ENST00000625617 DBNLQ9UJU6 430 aaKnown RBP17.7■□□□□ 0.42
TUBB3-215ENST00000625617 PALD1Q9ULE6 856 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms