RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.68□□□□□ -0.22
DDX41-218ENST00000625286 PAK6Q9NQU5 681 aaPredicted RBP13.68□□□□□ -0.22
DDX41-218ENST00000625286 SIPA1L1O43166 1804 aa13.68□□□□□ -0.22
DDX41-218ENST00000625286 PLXNB2O15031 1838 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 ATAD5Q96QE3 1844 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 A0A0C4DFX4 3053 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 TNPO2O14787 897 aaKnown RBP13.67□□□□□ -0.22
DDX41-218ENST00000625286 ARID4AP29374 1257 aaPredicted RBP13.67□□□□□ -0.22
DDX41-218ENST00000625286 MCAMP43121 646 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 TRIM32Q13049 653 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 MVPQ14764 893 aaKnown RBP13.67□□□□□ -0.22
DDX41-218ENST00000625286 SLF2Q8IX21 1173 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 SH3RF3Q8TEJ3 882 aaPredicted RBP13.67□□□□□ -0.22
DDX41-218ENST00000625286 ARHGAP45Q92619 1136 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 DEFB118Q96PH6 123 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 CRISPLD2Q9H0B8 497 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 OSBPL5Q9H0X9 879 aaPredicted RBP13.67□□□□□ -0.22
DDX41-218ENST00000625286 GJD2Q9UKL4 321 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 AKAP2Q9Y2D5 859 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 LOC285556D6RIA3 1793 aa13.67□□□□□ -0.22
DDX41-218ENST00000625286 MYO5AQ9Y4I1 1855 aaKnown RBP13.67□□□□□ -0.22
DDX41-218ENST00000625286 CAP2P40123 477 aa13.66□□□□□ -0.22
DDX41-218ENST00000625286 MNX1P50219 401 aaPredicted RBP13.66□□□□□ -0.22
DDX41-218ENST00000625286 HMGCS2P54868 508 aa13.66□□□□□ -0.22
DDX41-218ENST00000625286 POTEEQ6S8J3 1075 aa13.66□□□□□ -0.22
DDX41-218ENST00000625286 ADGRA1Q86SQ6 560 aa13.66□□□□□ -0.22
DDX41-218ENST00000625286 SMCR8Q8TEV9 937 aaPredicted RBP13.66□□□□□ -0.22
DDX41-218ENST00000625286 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
DDX41-218ENST00000625286 HTATIP2Q9BUP3 242 aa13.66□□□□□ -0.22
DDX41-218ENST00000625286 SOX1O00570 391 aaPredicted RBP13.65□□□□□ -0.22
DDX41-218ENST00000625286 BCAR3O75815 825 aa13.65□□□□□ -0.22
DDX41-218ENST00000625286 TFRCP02786 760 aaKnown RBP13.65□□□□□ -0.22
DDX41-218ENST00000625286 GNAI3P08754 354 aa13.65□□□□□ -0.22
DDX41-218ENST00000625286 TRIM27P14373 513 aa13.65□□□□□ -0.22
DDX41-218ENST00000625286 FAM110CQ1W6H9 321 aa13.65□□□□□ -0.22
DDX41-218ENST00000625286 PROCA1Q8NCQ7 364 aaPredicted RBP13.65□□□□□ -0.22
DDX41-218ENST00000625286 ZNF280CQ8ND82 737 aa13.65□□□□□ -0.22
DDX41-218ENST00000625286 PAWRQ96IZ0 340 aaKnown RBP13.65□□□□□ -0.22
DDX41-218ENST00000625286 ASCC2Q9H1I8 757 aaPredicted RBP13.65□□□□□ -0.22
DDX41-218ENST00000625286 DNAJC18Q9H819 358 aa13.65□□□□□ -0.22
DDX41-218ENST00000625286 SNRKQ9NRH2 765 aa13.65□□□□□ -0.22
DDX41-218ENST00000625286 HDAC5Q9UQL6 1122 aa13.65□□□□□ -0.22
DDX41-218ENST00000625286 CDK5RAP2Q96SN8 1893 aa13.65□□□□□ -0.22
DDX41-218ENST00000625286 COL2A1P02458 1487 aaPredicted RBP13.64□□□□□ -0.23
DDX41-218ENST00000625286 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
DDX41-218ENST00000625286 RAI14Q9P0K7 980 aa13.64□□□□□ -0.23
DDX41-218ENST00000625286 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
DDX41-218ENST00000625286 USP17L5A8MUK1 530 aa13.63□□□□□ -0.23
DDX41-218ENST00000625286 LDHCP07864 332 aa13.63□□□□□ -0.23
DDX41-218ENST00000625286 TEX11Q8IYF3 940 aa13.63□□□□□ -0.23
DDX41-218ENST00000625286 COA7Q96BR5 231 aa13.63□□□□□ -0.23
DDX41-218ENST00000625286 P2RX7Q99572 595 aaKnown RBP13.63□□□□□ -0.23
DDX41-218ENST00000625286 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.63□□□□□ -0.231e-5■■■□□ 18
DDX41-218ENST00000625286 TXNRD2Q9NNW7 524 aa13.63□□□□□ -0.23
DDX41-218ENST00000625286 STAP2Q9UGK3 403 aa13.63□□□□□ -0.23
DDX41-218ENST00000625286 DNAH12Q6ZR08 3092 aa13.62□□□□□ -0.23
DDX41-218ENST00000625286 EVI5O60447 810 aa13.62□□□□□ -0.23
DDX41-218ENST00000625286 MAP4K4O95819 1239 aaPredicted RBP13.62□□□□□ -0.23
DDX41-218ENST00000625286 GNAI2P04899 355 aa13.62□□□□□ -0.23
DDX41-218ENST00000625286 CYP2E1P05181 493 aaPredicted RBP13.62□□□□□ -0.23
DDX41-218ENST00000625286 GSTO1P78417 241 aa13.62□□□□□ -0.23
DDX41-218ENST00000625286 POLA2Q14181 598 aa13.62□□□□□ -0.23
DDX41-218ENST00000625286 METTL16Q86W50 562 aaKnown RBP13.62□□□□□ -0.23
DDX41-218ENST00000625286 CLUAP1Q96AJ1 413 aa13.62□□□□□ -0.23
DDX41-218ENST00000625286 DBNDD2Q9BQY9 259 aa13.62□□□□□ -0.23
DDX41-218ENST00000625286 WDR18Q9BV38 432 aa13.62□□□□□ -0.23
DDX41-218ENST00000625286 AATFQ9NY61 560 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX41-218ENST00000625286 LRP2BPQ9P2M1 347 aa13.62□□□□□ -0.23
DDX41-218ENST00000625286 NR2E3Q9Y5X4 410 aa13.62□□□□□ -0.23
DDX41-218ENST00000625286 GCLCP48506 637 aaPredicted RBP13.61□□□□□ -0.23
DDX41-218ENST00000625286 PPP4CP60510 307 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 G3BP1Q13283 466 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX41-218ENST00000625286 MTMR2Q13614 643 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 Q3C1V9 767 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 GORABQ5T7V8 394 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 ATF7IPQ6VMQ6 1270 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 MAPKAPK5Q8IW41 473 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 TGFBRAP1Q8WUH2 860 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 TRIB2Q92519 343 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 PI4KBQ9UBF8 816 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 RBPJLQ9UBG7 517 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 MORF4L1Q9UBU8 362 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
DDX41-218ENST00000625286 PNMA3Q9UL41 463 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
DDX41-218ENST00000625286 FOCADQ5VW36 1801 aa13.6□□□□□ -0.23
DDX41-218ENST00000625286 HOXA7P31268 230 aaPredicted RBP13.6□□□□□ -0.23
DDX41-218ENST00000625286 BACE1P56817 501 aa13.6□□□□□ -0.23
DDX41-218ENST00000625286 DYNLL1P63167 89 aaKnown RBP13.6□□□□□ -0.23
DDX41-218ENST00000625286 TNNI3KQ59H18 835 aa13.6□□□□□ -0.23
DDX41-218ENST00000625286 TMEM57Q8N5G2 664 aa13.6□□□□□ -0.23
DDX41-218ENST00000625286 FRAT1Q92837 279 aaPredicted RBP13.6□□□□□ -0.23
DDX41-218ENST00000625286 PIH1D3Q9NQM4 214 aaKnown RBP13.6□□□□□ -0.23
DDX41-218ENST00000625286 FPGT-TNNI3KV9GXZ4 949 aa13.6□□□□□ -0.23
DDX41-218ENST00000625286 LAMA2P24043 3122 aaKnown RBP13.59□□□□□ -0.23
DDX41-218ENST00000625286 GDF11O95390 407 aa13.59□□□□□ -0.23
DDX41-218ENST00000625286 HMGCRP04035 888 aa13.59□□□□□ -0.23
DDX41-218ENST00000625286 UQCRFS1P1P0C7P4 283 aa13.59□□□□□ -0.23
DDX41-218ENST00000625286 ZAP70P43403 619 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms