RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, human

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-215	ENST00000624193	SRGAP3	O43295	1099 aa		18.94	■□□□□ 0.62
ATRX-215	ENST00000624193	NPM3	O75607	178 aa	Known RBP	18.94	■□□□□ 0.62
ATRX-215	ENST00000624193	SPP2	Q13103	211 aa		18.94	■□□□□ 0.62
ATRX-215	ENST00000624193	PI16	Q6UXB8	463 aa		18.94	■□□□□ 0.62
ATRX-215	ENST00000624193	CRISPLD2	Q9H0B8	497 aa		18.94	■□□□□ 0.62
ATRX-215	ENST00000624193	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.94	■□□□□ 0.62
ATRX-215	ENST00000624193	HMG20B	Q9P0W2	317 aa		18.94	■□□□□ 0.62
ATRX-215	ENST00000624193	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.94	■□□□□ 0.62
ATRX-215	ENST00000624193	COL2A1	P02458	1487 aa	Predicted RBP	18.94	■□□□□ 0.62
ATRX-215	ENST00000624193	CT47B1	P0C2W7	299 aa	Predicted RBP	18.93	■□□□□ 0.62
ATRX-215	ENST00000624193	CAPN2	P17655	700 aa		18.93	■□□□□ 0.62
ATRX-215	ENST00000624193	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
ATRX-215	ENST00000624193	ZNF280C	Q8ND82	737 aa		18.93	■□□□□ 0.62
ATRX-215	ENST00000624193	PAWR	Q96IZ0	340 aa	Known RBP	18.93	■□□□□ 0.62
ATRX-215	ENST00000624193	NEUROD6	Q96NK8	337 aa		18.93	■□□□□ 0.62
ATRX-215	ENST00000624193	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
ATRX-215	ENST00000624193		A0A1W2PPC1	479 aa		18.92	■□□□□ 0.62
ATRX-215	ENST00000624193	LDHC	P07864	332 aa		18.92	■□□□□ 0.62
ATRX-215	ENST00000624193	GCLC	P48506	637 aa	Predicted RBP	18.92	■□□□□ 0.62
ATRX-215	ENST00000624193	HMGCS2	P54868	508 aa		18.92	■□□□□ 0.62
ATRX-215	ENST00000624193	GSTO1	P78417	241 aa		18.92	■□□□□ 0.62
ATRX-215	ENST00000624193	TBC1D9	Q6ZT07	1266 aa		18.92	■□□□□ 0.62
ATRX-215	ENST00000624193	SPATA5	Q8NB90	893 aa		18.92	■□□□□ 0.62
ATRX-215	ENST00000624193	DIS3L	Q8TF46	1054 aa	Known RBP	18.92	■□□□□ 0.62
ATRX-215	ENST00000624193	NSUN4	Q96CB9	384 aa	Known RBP	18.92	■□□□□ 0.62
ATRX-215	ENST00000624193	SZT2	Q5T011	3432 aa		18.92	■□□□□ 0.62
ATRX-215	ENST00000624193	MAP4K4	O95819	1239 aa	Predicted RBP	18.91	■□□□□ 0.62
ATRX-215	ENST00000624193	HMGCR	P04035	888 aa		18.91	■□□□□ 0.62
ATRX-215	ENST00000624193	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
ATRX-215	ENST00000624193	MTX1	Q13505	466 aa		18.91	■□□□□ 0.62
ATRX-215	ENST00000624193	RRP1B	Q14684	758 aa	Known RBP	18.91	■□□□□ 0.62
ATRX-215	ENST00000624193	GORAB	Q5T7V8	394 aa		18.91	■□□□□ 0.62
ATRX-215	ENST00000624193	RAI14	Q9P0K7	980 aa		18.91	■□□□□ 0.62
ATRX-215	ENST00000624193	SIPA1L1	O43166	1804 aa		18.9	■□□□□ 0.62
ATRX-215	ENST00000624193	SOX1	O00570	391 aa	Predicted RBP	18.9	■□□□□ 0.62
ATRX-215	ENST00000624193	GNAI3	P08754	354 aa		18.9	■□□□□ 0.62
ATRX-215	ENST00000624193	CAP2	P40123	477 aa		18.9	■□□□□ 0.62
ATRX-215	ENST00000624193	NECAB2	Q7Z6G3	386 aa		18.9	■□□□□ 0.62
ATRX-215	ENST00000624193	TBC1D2	Q9BYX2	928 aa		18.9	■□□□□ 0.62
ATRX-215	ENST00000624193	ASCC2	Q9H1I8	757 aa	Predicted RBP	18.9	■□□□□ 0.62
ATRX-215	ENST00000624193	STAP2	Q9UGK3	403 aa		18.9	■□□□□ 0.62
ATRX-215	ENST00000624193	MAST2	Q6P0Q8	1798 aa		18.9	■□□□□ 0.62
ATRX-215	ENST00000624193	PLXNB2	O15031	1838 aa		18.9	■□□□□ 0.62
ATRX-215	ENST00000624193	DDX60L	Q5H9U9	1706 aa	Known RBP	18.89	■□□□□ 0.61
ATRX-215	ENST00000624193	USP17L5	A8MUK1	530 aa		18.89	■□□□□ 0.61
ATRX-215	ENST00000624193	ARID4A	P29374	1257 aa	Predicted RBP	18.89	■□□□□ 0.61
ATRX-215	ENST00000624193	TEX11	Q8IYF3	940 aa		18.89	■□□□□ 0.61
ATRX-215	ENST00000624193	RANBP2	P49792	3224 aa	Known RBP	18.89	■□□□□ 0.61
ATRX-215	ENST00000624193	TRIM32	Q13049	653 aa		18.88	■□□□□ 0.61
ATRX-215	ENST00000624193	SH3D19	Q5HYK7	790 aa		18.88	■□□□□ 0.61
ATRX-215	ENST00000624193	C7orf61	Q8IZ16	206 aa		18.88	■□□□□ 0.61
ATRX-215	ENST00000624193	ANKLE1	Q8NAG6	615 aa		18.88	■□□□□ 0.61
ATRX-215	ENST00000624193	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.88	■□□□□ 0.61
ATRX-215	ENST00000624193	LRCH3	Q96II8	777 aa		18.88	■□□□□ 0.61
ATRX-215	ENST00000624193	AS3MT	Q9HBK9	375 aa		18.88	■□□□□ 0.61
ATRX-215	ENST00000624193	HERC5	Q9UII4	1024 aa	Known RBP	18.88	■□□□□ 0.61
ATRX-215	ENST00000624193	GJD2	Q9UKL4	321 aa		18.88	■□□□□ 0.61
ATRX-215	ENST00000624193	CDK5RAP2	Q96SN8	1893 aa		18.88	■□□□□ 0.61
ATRX-215	ENST00000624193	MCAM	P43121	646 aa		18.87	■□□□□ 0.61
ATRX-215	ENST00000624193	RARS	P54136	660 aa	Known RBP	18.87	■□□□□ 0.61
ATRX-215	ENST00000624193	MTMR2	Q13614	643 aa		18.87	■□□□□ 0.61
ATRX-215	ENST00000624193	RPTOR	Q8N122	1335 aa		18.87	■□□□□ 0.61
ATRX-215	ENST00000624193	HMX1	Q9NP08	348 aa	Predicted RBP	18.87	■□□□□ 0.61
ATRX-215	ENST00000624193	LRP2BP	Q9P2M1	347 aa		18.87	■□□□□ 0.61
ATRX-215	ENST00000624193	FOCAD	Q5VW36	1801 aa		18.86	■□□□□ 0.61
ATRX-215	ENST00000624193	ZBED9	Q6R2W3	1325 aa		18.86	■□□□□ 0.61
ATRX-215	ENST00000624193	ARHGAP45	Q92619	1136 aa		18.86	■□□□□ 0.61
ATRX-215	ENST00000624193	NOL10	Q9BSC4	688 aa	Known RBP	18.86	■□□□□ 0.61
ATRX-215	ENST00000624193	MORF4L1	Q9UBU8	362 aa		18.86	■□□□□ 0.61
ATRX-215	ENST00000624193	IRX3	P78415	501 aa	Predicted RBP	18.85	■□□□□ 0.61
ATRX-215	ENST00000624193	TRIB2	Q92519	343 aa		18.85	■□□□□ 0.61
ATRX-215	ENST00000624193	NBPF3	Q9H094	633 aa		18.85	■□□□□ 0.61
ATRX-215	ENST00000624193	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
ATRX-215	ENST00000624193	PI4KB	Q9UBF8	816 aa		18.85	■□□□□ 0.61
ATRX-215	ENST00000624193	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.85	■□□□□ 0.61
ATRX-215	ENST00000624193	PNMA6E	A0A0J9YXQ4	647 aa		18.84	■□□□□ 0.61
ATRX-215	ENST00000624193	PEX10	O60683	326 aa		18.84	■□□□□ 0.61
ATRX-215	ENST00000624193	UQCRFS1P1	P0C7P4	283 aa		18.84	■□□□□ 0.61
ATRX-215	ENST00000624193	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
ATRX-215	ENST00000624193	SLC17A8	Q8NDX2	589 aa		18.84	■□□□□ 0.61
ATRX-215	ENST00000624193	GDF15	Q99988	308 aa		18.84	■□□□□ 0.61
ATRX-215	ENST00000624193	WDR18	Q9BV38	432 aa		18.84	■□□□□ 0.61
ATRX-215	ENST00000624193	DHX36	Q9H2U1	1008 aa	Known RBP	18.84	■□□□□ 0.61
ATRX-215	ENST00000624193	TMOD4	Q9NZQ9	345 aa		18.84	■□□□□ 0.61
ATRX-215	ENST00000624193	BAG3	O95817	575 aa		18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	GNAI2	P04899	355 aa		18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	ASNS	P08243	561 aa		18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	CYP2B6	P20813	491 aa		18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	MNX1	P50219	401 aa	Predicted RBP	18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	BACE1	P56817	501 aa		18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	JAG1	P78504	1218 aa		18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	NAA16	Q6N069	864 aa	Predicted RBP	18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	MAPKAPK5	Q8IW41	473 aa		18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	P2RX7	Q99572	595 aa	Known RBP	18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	C11orf49	Q9H6J7	331 aa		18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	DNAJC18	Q9H819	358 aa		18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	SNRK	Q9NRH2	765 aa		18.83	■□□□□ 0.6
ATRX-215	ENST00000624193	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	FLT1	P17948	1338 aa		18.82	■□□□□ 0.6
ATRX-215	ENST00000624193	PLCG2	P16885	1265 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms