RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 PDE1CQ14123 709 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-206ENST00000623610 TAX1BP1Q86VP1 789 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 MNS1Q8NEH6 495 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 ERCC4Q92889 916 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-206ENST00000623610 SLC26A8Q96RN1 970 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 RPAP3Q9H6T3 665 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-206ENST00000623610 PLEKHA5Q9HAU0 1116 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 SEL1LQ9UBV2 794 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 FANCIQ9NVI1 1328 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 FAM25EA8MYX2 175 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 AKR1B10O60218 316 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 FMR1Q06787 632 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDKL5-206ENST00000623610 COX10Q12887 443 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 PLBD1Q6P4A8 553 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 KRT26Q7Z3Y9 468 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 FAM200AQ8TCP9 573 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 ATXN2LQ8WWM7 1075 aaKnown RBP9.97□□□□□ -0.81
CDKL5-206ENST00000623610 PCDHGB3Q9Y5G1 929 aa9.97□□□□□ -0.81
CDKL5-206ENST00000623610 CCDC144AA2RUR9 1427 aa9.96□□□□□ -0.81
CDKL5-206ENST00000623610 KLRG2A4D1S0 409 aaPredicted RBP9.96□□□□□ -0.82
CDKL5-206ENST00000623610 GJA8P48165 433 aa9.96□□□□□ -0.82
CDKL5-206ENST00000623610 SQSTM1Q13501 440 aa9.96□□□□□ -0.82
CDKL5-206ENST00000623610 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDKL5-206ENST00000623610 TRIML1Q8N9V2 468 aa9.96□□□□□ -0.82
CDKL5-206ENST00000623610 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDKL5-206ENST00000623610 HERPUD2Q9BSE4 406 aa9.96□□□□□ -0.82
CDKL5-206ENST00000623610 RTFDC1Q9BY42 306 aaPredicted RBP9.96□□□□□ -0.82
CDKL5-206ENST00000623610 TRPC6Q9Y210 931 aa9.96□□□□□ -0.82
CDKL5-206ENST00000623610 WASHC2AQ641Q2 1341 aa9.96□□□□□ -0.82
CDKL5-206ENST00000623610 FOXN3O00409 490 aaPredicted RBP9.95□□□□□ -0.82
CDKL5-206ENST00000623610 OATP04181 439 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 SLC5A1P13866 664 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 ATF7P17544 494 aaPredicted RBP9.95□□□□□ -0.82
CDKL5-206ENST00000623610 SMARCA1P28370 1054 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 MAPK8P45983 427 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 PLA2G4AP47712 749 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 HDGFP51858 240 aaKnown RBP9.95□□□□□ -0.82
CDKL5-206ENST00000623610 SLC7A5Q01650 507 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 MZT2AQ6P582 158 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 HOMER1Q86YM7 354 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 CDK5RAP3Q96JB5 506 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 NUDT12Q9BQG2 462 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 CYLDQ9NQC7 956 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 KIF16BQ96L93 1317 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 IQCA1LA6NCM1 817 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 MOXD2PA6NHM9 499 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 SLC27A2O14975 620 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 PRPF40AO75400 957 aaKnown RBP9.95□□□□□ -0.82
CDKL5-206ENST00000623610 KATNA1O75449 491 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 PGRP06401 933 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 MLC1Q15049 377 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 C1orf122Q6ZSJ8 110 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 EPB41L4AQ9HCS5 686 aaPredicted RBP9.95□□□□□ -0.82
CDKL5-206ENST00000623610 DNMT3AQ9Y6K1 912 aaPredicted RBP9.95□□□□□ -0.82
CDKL5-206ENST00000623610 STRCP1A6NGW2 1772 aa9.95□□□□□ -0.82
CDKL5-206ENST00000623610 PLEKHG1Q9ULL1 1385 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 RASGRP1O95267 797 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 SWSAP1Q6NVH7 229 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 LLGL2Q6P1M3 1020 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 RSRC2Q7L4I2 434 aaKnown RBP9.94□□□□□ -0.82
CDKL5-206ENST00000623610 TDRD7Q8NHU6 1098 aaKnown RBP9.94□□□□□ -0.82
CDKL5-206ENST00000623610 C1orf216Q8TAB5 229 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 DNAJC7Q99615 494 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 PDRG1Q9NUG6 133 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 SIRPGQ9P1W8 387 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 LEMD3Q9Y2U8 911 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 NEXMIFQ5QGS0 1516 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 FAM170AA1A519 330 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 TRIM64A6NGJ6 449 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 TRIM64BA6NI03 449 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 FMNL1O95466 1100 aaPredicted RBP9.94□□□□□ -0.82
CDKL5-206ENST00000623610 MSL3P1P0C860 447 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 HTR3AP46098 478 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 ARMC4Q5T2S8 1044 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 GALNT17Q6IS24 598 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 IRGCQ6NXR0 463 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 CTR9Q6PD62 1173 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 CATSPER4Q7RTX7 472 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 C17orf50Q8WW18 174 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 ATP6V1E2Q96A05 226 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 GSDMAQ96QA5 445 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 SMAD5Q99717 465 aaKnown RBP9.94□□□□□ -0.82
CDKL5-206ENST00000623610 ASPSCR1Q9BZE9 553 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 TMOD4Q9NZQ9 345 aa9.94□□□□□ -0.82
CDKL5-206ENST00000623610 TREHO43280 583 aa9.93□□□□□ -0.82
CDKL5-206ENST00000623610 EIF2B5Q13144 721 aaKnown RBP9.93□□□□□ -0.82
CDKL5-206ENST00000623610 HIBCHQ6NVY1 386 aaPredicted RBP9.93□□□□□ -0.82
CDKL5-206ENST00000623610 ANKS3Q6ZW76 656 aa9.93□□□□□ -0.82
CDKL5-206ENST00000623610 EEPD1Q7L9B9 569 aa9.93□□□□□ -0.82
CDKL5-206ENST00000623610 GTF3C2Q8WUA4 911 aaPredicted RBP9.93□□□□□ -0.82
CDKL5-206ENST00000623610 TMEM260Q9NX78 707 aa9.93□□□□□ -0.82
CDKL5-206ENST00000623610 ZMAT5Q9UDW3 170 aaKnown RBP9.93□□□□□ -0.82
CDKL5-206ENST00000623610 ANKRD30BQ9BXX2 1392 aa9.93□□□□□ -0.82
CDKL5-206ENST00000623610 KIF3CO14782 793 aa9.92□□□□□ -0.82
CDKL5-206ENST00000623610 CCP110O43303 1012 aa9.92□□□□□ -0.82
CDKL5-206ENST00000623610 SETSIPP0DME0 302 aa9.92□□□□□ -0.82
CDKL5-206ENST00000623610 RCAN1P53805 252 aa9.92□□□□□ -0.82
CDKL5-206ENST00000623610 PAK2Q13177 524 aa9.92□□□□□ -0.82
CDKL5-206ENST00000623610 DACT2Q5SW24 774 aa9.92□□□□□ -0.82
CDKL5-206ENST00000623610 FAM180BQ6P0A1 224 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms