RNA–Protein interactions for RNA: ENST00000623196.1

C9orf139-202, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 2 BASIC

Gene C9orf139, Length 4,990 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-202ENST00000623196 PICALMQ13492 652 aa16.67■□□□□ 0.26
C9orf139-202ENST00000623196 CABLES1Q8TDN4 633 aa16.67■□□□□ 0.26
C9orf139-202ENST00000623196 ERCC5P28715 1186 aaPredicted RBP16.66■□□□□ 0.26
C9orf139-202ENST00000623196 ARHGAP25P42331 645 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 PDE4DQ08499 809 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 SETDB2Q96T68 719 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 CTNND2Q9UQB3 1225 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 TRPM2O94759 1503 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 GOLGA6BA6NDN3 693 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 TMEM87BQ96K49 555 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 KRT9P35527 623 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 NAP1L4Q99733 375 aaKnown RBP16.66■□□□□ 0.26
C9orf139-202ENST00000623196 FRMD4BQ9Y2L6 1034 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 KCNQ3O43525 872 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 DEXIO95424 95 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 KCNA6P17658 529 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 ST5P78524 1137 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 ZNF622Q969S3 477 aaKnown RBP eCLIP16.66■□□□□ 0.26
C9orf139-202ENST00000623196 NGLY1Q96IV0 654 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 NOX5Q96PH1 765 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 NUP58Q9BVL2 599 aa16.66■□□□□ 0.26
C9orf139-202ENST00000623196 MKRN1Q9UHC7 482 aaKnown RBP16.66■□□□□ 0.26
C9orf139-202ENST00000623196 TRPM1Q7Z4N2 1603 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 PPFIA1Q13136 1202 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 LETM2Q2VYF4 491 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 SLC9C1Q4G0N8 1177 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 FEZ2Q9UHY8 353 aaPredicted RBP16.65■□□□□ 0.26
C9orf139-202ENST00000623196 SBNO1A3KN83 1393 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 KIAA0232Q92628 1395 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 AOX1Q06278 1338 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 F8W031 263 aaPredicted RBP16.65■□□□□ 0.26
C9orf139-202ENST00000623196 EPB41P11171 864 aaKnown RBP16.65■□□□□ 0.26
C9orf139-202ENST00000623196 CNNM4Q6P4Q7 775 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 SECISBP2LQ93073 1101 aaKnown RBP16.65■□□□□ 0.26
C9orf139-202ENST00000623196 NFE2L3Q9Y4A8 694 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 CUTAO60888 179 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 TNFAIP3P21580 790 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 DPH6Q7L8W6 267 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
C9orf139-202ENST00000623196 FYB2Q5VWT5 728 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 ZNF365Q70YC5 407 aa16.65■□□□□ 0.26
C9orf139-202ENST00000623196 HELBQ8NG08 1087 aaPredicted RBP16.65■□□□□ 0.26
C9orf139-202ENST00000623196 CPSF2Q9P2I0 782 aaKnown RBP16.65■□□□□ 0.26
C9orf139-202ENST00000623196 UTP11Q9Y3A2 253 aaKnown RBP16.65■□□□□ 0.26
C9orf139-202ENST00000623196 ZNF804AQ7Z570 1209 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 OGFOD1Q8N543 542 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.25
C9orf139-202ENST00000623196 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 MYO5CQ9NQX4 1742 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 POLR2DO15514 142 aaKnown RBP16.64■□□□□ 0.25
C9orf139-202ENST00000623196 VSIG1Q86XK7 387 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 FAM212AQ96EL1 285 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 PPP1R12CQ9BZL4 782 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 MAGEA1P43355 309 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 MRPL12P52815 198 aaKnown RBP16.64■□□□□ 0.25
C9orf139-202ENST00000623196 DDX21Q9NR30 783 aaKnown RBP eCLIP16.64■□□□□ 0.25
C9orf139-202ENST00000623196 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 CETN3O15182 167 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 GCP02774 474 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 RNASE9P60153 205 aaKnown RBP16.64■□□□□ 0.25
C9orf139-202ENST00000623196 ERCC6LQ2NKX8 1250 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 IL17REQ8NFR9 667 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 WDR66Q8TBY9 1149 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 IP6K1Q92551 441 aa16.64■□□□□ 0.25
C9orf139-202ENST00000623196 ZNF202O95125 648 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 MRPS9P82933 396 aaKnown RBP16.63■□□□□ 0.25
C9orf139-202ENST00000623196 AKNAD1Q5T1N1 836 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
C9orf139-202ENST00000623196 DIS3L2Q8IYB7 885 aaKnown RBP16.63■□□□□ 0.25
C9orf139-202ENST00000623196 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 VCX3BQ9H321 246 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 PAK1Q13153 545 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 PAK2Q13177 524 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 UAP1Q16222 522 aaPredicted RBP16.63■□□□□ 0.25
C9orf139-202ENST00000623196 ANGEL1Q9UNK9 670 aaKnown RBP16.63■□□□□ 0.25
C9orf139-202ENST00000623196 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 KIFAP3Q92845 792 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 ZKSCAN3Q9BRR0 538 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 MAPK8IP1Q9UQF2 711 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 B4DLN1 442 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 NLRP12P59046 1061 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 NCBP1Q09161 790 aaKnown RBP16.63■□□□□ 0.25
C9orf139-202ENST00000623196 PLS1Q14651 629 aa16.63■□□□□ 0.25
C9orf139-202ENST00000623196 RPUSD2Q8IZ73 545 aaKnown RBP16.63■□□□□ 0.25
C9orf139-202ENST00000623196 MBD4O95243 580 aa16.62■□□□□ 0.25
C9orf139-202ENST00000623196 HSPA1LP34931 641 aa16.62■□□□□ 0.25
C9orf139-202ENST00000623196 CLNS1AP54105 237 aaKnown RBP16.62■□□□□ 0.25
C9orf139-202ENST00000623196 MIPOL1Q8TD10 442 aa16.62■□□□□ 0.25
C9orf139-202ENST00000623196 SSH3Q8TE77 659 aa16.62■□□□□ 0.25
C9orf139-202ENST00000623196 B4E1Z4 1266 aa16.62■□□□□ 0.25
C9orf139-202ENST00000623196 IRS4O14654 1257 aaPredicted RBP16.62■□□□□ 0.25
C9orf139-202ENST00000623196 ZNF500O60304 480 aaPredicted RBP16.62■□□□□ 0.25
C9orf139-202ENST00000623196 GMNNO75496 209 aa16.62■□□□□ 0.25
C9orf139-202ENST00000623196 ARID4AP29374 1257 aaPredicted RBP16.62■□□□□ 0.25
C9orf139-202ENST00000623196 CADPS2Q86UW7 1296 aa16.62■□□□□ 0.25
C9orf139-202ENST00000623196 MAK16Q9BXY0 300 aaKnown RBP16.62■□□□□ 0.25
C9orf139-202ENST00000623196 STX10O60499 249 aa16.61■□□□□ 0.25
C9orf139-202ENST00000623196 TSNAXIP1Q2TAA8 658 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms