RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 STK3Q13188 491 aa7.12□□□□□ -1.27
ERCC6-209ENST00000623073 SDCCAG8Q86SQ7 713 aaPredicted RBP7.12□□□□□ -1.27
ERCC6-209ENST00000623073 ZNF280CQ8ND82 737 aa7.12□□□□□ -1.27
ERCC6-209ENST00000623073 ADAM21Q9UKJ8 722 aa7.12□□□□□ -1.27
ERCC6-209ENST00000623073 ATP6V0A2Q9Y487 856 aa7.12□□□□□ -1.27
ERCC6-209ENST00000623073 RAD51AP2Q09MP3 1159 aa7.12□□□□□ -1.27
ERCC6-209ENST00000623073 TEDDM1Q5T9Z0 273 aa7.12□□□□□ -1.27
ERCC6-209ENST00000623073 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.12□□□□□ -1.27
ERCC6-209ENST00000623073 COG7P83436 770 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 RUFY3Q7L099 469 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 CXorf56Q9H5V9 222 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 DCTN3O75935 186 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 GCFC2P16383 781 aaKnown RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 IL9RQ01113 521 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 FAM129AQ9BZQ8 928 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 TXNDC16Q9P2K2 825 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 EPS15L1Q9UBC2 864 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 CHGBP05060 677 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 STAT6P42226 847 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 CCDC124Q96CT7 223 aaKnown RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 BPIFA3Q9BQP9 254 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 ANTXR1Q9H6X2 564 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 C10orf88Q9H8K7 445 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 FAM204AQ9H8W3 233 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 CBX8Q9HC52 389 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 KRT13P13646 458 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 TDRD9Q8NDG6 1382 aaKnown RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 SRRM3A6NNA2 597 aaPredicted RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 MAN1A2O60476 641 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 PCYT1AP49585 367 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 DNM2P50570 870 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 SRLQ86TD4 932 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 CUEDC2Q9H467 287 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 ZSWIM4Q9H7M6 989 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 THAP12O43422 761 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 EEF1GP26641 437 aaKnown RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 CTNNA1P35221 906 aaKnown RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 MAP3K7CLP57077 242 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 UBXN1Q04323 297 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 HS2ST1Q7LGA3 356 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 CCDC97Q96F63 343 aaPredicted RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 SBNO2Q9Y2G9 1366 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 CCDC188H7C350 402 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 HARSP12081 509 aaKnown RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 C20orf194Q5TEA3 1177 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 JPH4Q96JJ6 628 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 TMEM87BQ96K49 555 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 COL17A1Q9UMD9 1497 aaPredicted RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 GNA11P29992 359 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 STX2P32856 288 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 LIG3P49916 1009 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 HEATR3Q7Z4Q2 680 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 HNRNPLLQ8WVV9 542 aaKnown RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 FAM81BQ96LP2 452 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 CHCHD3Q9NX63 227 aaKnown RBP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 SYNRGQ9UMZ2 1314 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 ZBTB43O43298 467 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 ATP8B2P98198 1209 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 PDE4BQ07343 736 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 SND1Q7KZF4 910 aaKnown RBP eCLIP7.11□□□□□ -1.27
ERCC6-209ENST00000623073 LZTFL1Q9NQ48 299 aa7.11□□□□□ -1.27
ERCC6-209ENST00000623073 PEG3Q9GZU2 1588 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 ESRRBO95718 433 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 DHX9Q08211 1270 aaKnown RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 ESR2Q92731 530 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 KIFAP3Q92845 792 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 BICD1Q96G01 975 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 PANX2Q96RD6 677 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 DIS3Q9Y2L1 958 aaKnown RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 NNTQ13423 1086 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 ADRM1Q16186 407 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 HHATQ5VTY9 493 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 ZNF148Q9UQR1 794 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 RPS6KA1Q15418 735 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 KLHDC4Q8TBB5 520 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 UBLCP1Q8WVY7 318 aaPredicted RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 NLRP7Q8WX94 980 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 ARHGEF2Q92974 986 aaKnown RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 PDP2Q9P2J9 529 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 APBB1IPQ7Z5R6 666 aaPredicted RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 KIAA1468Q9P260 1216 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 TPD52P55327 224 aaPredicted RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 FLIIQ13045 1269 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 PPP2R2CQ9Y2T4 447 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 CTIFO43310 598 aaKnown RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 IGHDP01880 384 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 CCT6AP40227 531 aaKnown RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 ANKRD35Q8N283 1001 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 EXOC6BQ9Y2D4 811 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 ASXL2Q76L83 1435 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 SOS2Q07890 1332 aaPredicted RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 MATR3P43243 847 aaKnown RBP eCLIP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 MCMDC2Q4G0Z9 681 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 MSL3Q8N5Y2 521 aaKnown RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 PRPF38AQ8NAV1 312 aaKnown RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 RHPN1Q8TCX5 695 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 ELF1P32519 619 aa7.1□□□□□ -1.27
ERCC6-209ENST00000623073 PRPF4BQ13523 1007 aaKnown RBP7.1□□□□□ -1.27
ERCC6-209ENST00000623073 KCNH5Q8NCM2 988 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms