RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 ERO1AQ96HE7 468 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 DNAJC18Q9H819 358 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 CPA4Q9UI42 421 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 AFG3L2Q9Y4W6 797 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 MYH7P12883 1935 aa12.43□□□□□ -0.42
PCDHGC3-207ENST00000622656 DDX60LQ5H9U9 1706 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 FLT1P17948 1338 aa12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 TBC1D12O60347 775 aa12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 CYP7A1P22680 504 aa12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 SLFNL1Q499Z3 407 aa12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 ANKRD23Q86SG2 305 aa12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 ERC1Q8IUD2 1116 aa12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 MIGA1Q8NAN2 632 aa12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 EFCC1Q9HA90 598 aa12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 SAP30BPQ9UHR5 308 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 PTPN22Q9Y2R2 807 aa12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 LOC285556D6RIA3 1793 aa12.42□□□□□ -0.42
PCDHGC3-207ENST00000622656 A0A0G2JLL6 359 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 TRIM75PA6NK02 468 aa12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 CXCL11O14625 94 aa12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 SMARCA5O60264 1052 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 CTNND1O60716 968 aaKnown RBP12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 CHGBP05060 677 aa12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 CYP2C8P10632 490 aa12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 PDE3AQ14432 1141 aa12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 C17orf99Q6UX52 265 aa12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 PRRT2Q7Z6L0 340 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 MAGEB6Q8N7X4 407 aa12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 NAV1Q8NEY1 1877 aa12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 KIF1BPQ96EK5 621 aa12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 PALD1Q9ULE6 856 aa12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 BAZ2AQ9UIF9 1905 aaKnown RBP12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 RBBP6Q7Z6E9 1792 aaKnown RBP12.41□□□□□ -0.42
PCDHGC3-207ENST00000622656 MAP4K4O95819 1239 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC3-207ENST00000622656 EVX2Q03828 476 aa12.4□□□□□ -0.42
PCDHGC3-207ENST00000622656 HSP90AB4PQ58FF6 505 aa12.4□□□□□ -0.42
PCDHGC3-207ENST00000622656 GADL1Q6ZQY3 521 aa12.4□□□□□ -0.42
PCDHGC3-207ENST00000622656 NOL10Q9BSC4 688 aaKnown RBP12.4□□□□□ -0.42
PCDHGC3-207ENST00000622656 ZCCHC17Q9NP64 241 aaKnown RBP12.4□□□□□ -0.42
PCDHGC3-207ENST00000622656 PICK1Q9NRD5 415 aa12.4□□□□□ -0.42
PCDHGC3-207ENST00000622656 PTCH2Q9Y6C5 1203 aa12.4□□□□□ -0.42
PCDHGC3-207ENST00000622656 POTEFA5A3E0 1075 aa12.39□□□□□ -0.43
PCDHGC3-207ENST00000622656 HMMRO75330 724 aa12.39□□□□□ -0.43
PCDHGC3-207ENST00000622656 BAG3O95817 575 aa12.39□□□□□ -0.43
PCDHGC3-207ENST00000622656 CAP2P40123 477 aa12.39□□□□□ -0.43
PCDHGC3-207ENST00000622656 LACTBP83111 547 aaPredicted RBP12.39□□□□□ -0.43
PCDHGC3-207ENST00000622656 TREML2Q5T2D2 321 aa12.39□□□□□ -0.43
PCDHGC3-207ENST00000622656 CLASRPQ8N2M8 674 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-207ENST00000622656 DNAJC2Q99543 621 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-207ENST00000622656 RIOK1Q9BRS2 568 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-207ENST00000622656 GOLIM4O00461 696 aa12.38□□□□□ -0.43
PCDHGC3-207ENST00000622656 GDF11O95390 407 aa12.38□□□□□ -0.43
PCDHGC3-207ENST00000622656 PLCG2P16885 1265 aa12.38□□□□□ -0.43
PCDHGC3-207ENST00000622656 SPP2Q13103 211 aa12.38□□□□□ -0.43
PCDHGC3-207ENST00000622656 METTL16Q86W50 562 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-207ENST00000622656 TRIM47Q96LD4 638 aa12.38□□□□□ -0.43
PCDHGC3-207ENST00000622656 BOLA2Q9H3K6 86 aa12.38□□□□□ -0.43
PCDHGC3-207ENST00000622656 PI4KBQ9UBF8 816 aa12.38□□□□□ -0.43
PCDHGC3-207ENST00000622656 TCRBV5S4A2TA0A5A2 114 aa12.37□□□□□ -0.43
PCDHGC3-207ENST00000622656 RAB11FIP3O75154 756 aa12.37□□□□□ -0.43
PCDHGC3-207ENST00000622656 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
PCDHGC3-207ENST00000622656 BCRP11274 1271 aa12.37□□□□□ -0.43
PCDHGC3-207ENST00000622656 PDE6AP16499 860 aa12.37□□□□□ -0.43
PCDHGC3-207ENST00000622656 HERC5Q9UII4 1024 aaKnown RBP12.37□□□□□ -0.43
PCDHGC3-207ENST00000622656 MYH8P13535 1937 aa12.37□□□□□ -0.43
PCDHGC3-207ENST00000622656 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 MYCP01106 439 aaPredicted RBP12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 PSMC4P43686 418 aa12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 HMGCS2P54868 508 aa12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 MAP3K12Q12852 859 aa12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 SLC9C2Q5TAH2 1124 aa12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 SH3TC2Q8TF17 1288 aa12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 ARMC5Q96C12 935 aa12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 DHX36Q9H2U1 1008 aaKnown RBP12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 PCDHB15Q9Y5E8 787 aa12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 ZNF532Q9HCE3 1301 aa12.36□□□□□ -0.43
PCDHGC3-207ENST00000622656 PLXNB2O15031 1838 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 PEX10O60683 326 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 ATP5JP18859 108 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 OSBPP22059 807 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 USP5P45974 858 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 PLCD1P51178 756 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 TSHZ3Q63HK5 1081 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 FASTKD5Q7L8L6 764 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 FOXP4Q8IVH2 680 aaPredicted RBP12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 LCORLQ8N3X6 602 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 ZNF280CQ8ND82 737 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 ZNF333Q96JL9 665 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 YTHDC1Q96MU7 727 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 PARK7Q99497 189 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 GABRQQ9UN88 632 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 AGTPBP1Q9UPW5 1226 aa12.35□□□□□ -0.43
PCDHGC3-207ENST00000622656 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
PCDHGC3-207ENST00000622656 PRKAB2O43741 272 aa12.34□□□□□ -0.43
PCDHGC3-207ENST00000622656 IGSF3O75054 1194 aa12.34□□□□□ -0.43
PCDHGC3-207ENST00000622656 CYP2D6P10635 497 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms