RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 PCDHAC2Q9Y5I4 1007 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 ENTPD3O75355 529 aa16.75■□□□□ 0.27
CLTCL1-212ENST00000622493 CHMP4CQ96CF2 233 aa16.75■□□□□ 0.27
CLTCL1-212ENST00000622493 ZNF274Q96GC6 653 aaPredicted RBP16.75■□□□□ 0.27
CLTCL1-212ENST00000622493 LRRC2Q9BYS8 371 aa16.75■□□□□ 0.27
CLTCL1-212ENST00000622493 TDRD3Q9H7E2 651 aaKnown RBP16.75■□□□□ 0.27
CLTCL1-212ENST00000622493 SAP30BPQ9UHR5 308 aaKnown RBP16.75■□□□□ 0.27
CLTCL1-212ENST00000622493 ANGEL1Q9UNK9 670 aaKnown RBP16.75■□□□□ 0.27
CLTCL1-212ENST00000622493 MYO1BO43795 1136 aa16.74■□□□□ 0.27
CLTCL1-212ENST00000622493 LIFRP42702 1097 aa16.74■□□□□ 0.27
CLTCL1-212ENST00000622493 NFIAQ12857 509 aa16.74■□□□□ 0.27
CLTCL1-212ENST00000622493 ME3Q16798 604 aa16.74■□□□□ 0.27
CLTCL1-212ENST00000622493 C16orf86Q6ZW13 317 aa16.74■□□□□ 0.27
CLTCL1-212ENST00000622493 GPC2Q8N158 579 aa16.74■□□□□ 0.27
CLTCL1-212ENST00000622493 TMTC2Q8N394 836 aa16.74■□□□□ 0.27
CLTCL1-212ENST00000622493 SPRYD3Q8NCJ5 442 aa16.74■□□□□ 0.27
CLTCL1-212ENST00000622493 IGDCC4Q8TDY8 1250 aa16.74■□□□□ 0.27
CLTCL1-212ENST00000622493 ZBED3Q96IU2 234 aaPredicted RBP16.74■□□□□ 0.27
CLTCL1-212ENST00000622493 ERICH2A1L162 156 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 SMIM22K7EJ46 135 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 HLA-DOAP06340 250 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 FKBP1CQ5VVH2 108 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 IQCA1Q86XH1 822 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 STK11IPQ8N1F8 1099 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 MKNK2Q9HBH9 465 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 MYOZ2Q9NPC6 264 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 COL2A1P02458 1487 aaPredicted RBP16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 SH2B2O14492 632 aaPredicted RBP16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 RANBP6O60518 1105 aaKnown RBP16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 GMPSP49915 693 aaPredicted RBP16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 SGMS1Q86VZ5 419 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 UBAC1Q9BSL1 405 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 FAM198AQ9UFP1 575 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 GJA3Q9Y6H8 435 aa16.73■□□□□ 0.27
CLTCL1-212ENST00000622493 ZNF541Q9H0D2 1346 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 IFIT3O14879 490 aaKnown RBP16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 GRIN3BO60391 1043 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 PRDM1O75626 825 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 LARGE1O95461 756 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 EVX2Q03828 476 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 GABPAQ06546 454 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 TMEM67Q5HYA8 995 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 NKX2-3Q8TAU0 364 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 DYNLL2Q96FJ2 89 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 EHD4Q9H223 541 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 SLKQ9H2G2 1235 aaPredicted RBP16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 ZNF70Q9UC06 446 aaPredicted RBP16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 SERPINB13Q9UIV8 391 aa16.72■□□□□ 0.27
CLTCL1-212ENST00000622493 WNT10BO00744 389 aa16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 DDIT3P35638 169 aa16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 CDK8P49336 464 aa16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 APOBRQ0VD83 1088 aa16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 SLC4A8Q2Y0W8 1093 aa16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 CCDC178Q5BJE1 867 aa16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 RNF181Q9P0P0 153 aa16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 PI4KBQ9UBF8 816 aa16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 SWAP70Q9UH65 585 aa16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 CNOT7Q9UIV1 285 aaKnown RBP16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 ATRNL1Q5VV63 1379 aa16.71■□□□□ 0.27
CLTCL1-212ENST00000622493 TSPY2A6NKD2 308 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 PFKFB2O60825 505 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 CACNB3P54284 484 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 GPR162Q16538 588 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 MICALL2Q8IY33 904 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 GTF3C6Q969F1 213 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 ZSCAN10Q96SZ4 725 aaPredicted RBP16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 LY9Q9HBG7 655 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 H7C1D1 291 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 PDIA3P30101 505 aaKnown RBP16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 TCP10Q12799 353 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 WTAPQ15007 396 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 CCDC83Q8IWF9 413 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 TCP11L1Q9NUJ3 509 aa16.7■□□□□ 0.26
CLTCL1-212ENST00000622493 TNKSO95271 1327 aa16.69■□□□□ 0.26
CLTCL1-212ENST00000622493 KLF18A0A0U1RQI7 1052 aa16.69■□□□□ 0.26
CLTCL1-212ENST00000622493 RCAN1P53805 252 aa16.69■□□□□ 0.26
CLTCL1-212ENST00000622493 SEC23AQ15436 765 aa16.69■□□□□ 0.26
CLTCL1-212ENST00000622493 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
CLTCL1-212ENST00000622493 GPHNQ9NQX3 736 aaPredicted RBP16.69■□□□□ 0.26
CLTCL1-212ENST00000622493 CHMP5Q9NZZ3 219 aa16.69■□□□□ 0.26
CLTCL1-212ENST00000622493 ZC3H4Q9UPT8 1303 aaKnown RBP16.69■□□□□ 0.26
CLTCL1-212ENST00000622493 CCDC69A6NI79 296 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 TSPY3P0CV98 308 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 TSPY8P0CW00 308 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 RASA1P20936 1047 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 TFAP4Q01664 338 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 C9orf131Q5VYM1 1079 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 NFXL1Q6ZNB6 911 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 ZFPM1Q8IX07 1006 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 ZKSCAN3Q9BRR0 538 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms