RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 TOMM22Q9NS69 142 aa12.59□□□□□ -0.39
CPNE3-212ENST00000621783 LIMCH1Q9UPQ0 1083 aa12.59□□□□□ -0.39
CPNE3-212ENST00000621783 COL2A1P02458 1487 aaPredicted RBP12.59□□□□□ -0.39
CPNE3-212ENST00000621783 ORC4O43929 436 aa12.58□□□□□ -0.4
CPNE3-212ENST00000621783 KDM4AO75164 1064 aa12.58□□□□□ -0.4
CPNE3-212ENST00000621783 PLCD1P51178 756 aa12.58□□□□□ -0.4
CPNE3-212ENST00000621783 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
CPNE3-212ENST00000621783 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
CPNE3-212ENST00000621783 DYNLL2Q96FJ2 89 aa12.58□□□□□ -0.4
CPNE3-212ENST00000621783 MYOZ2Q9NPC6 264 aa12.58□□□□□ -0.4
CPNE3-212ENST00000621783 FAM198AQ9UFP1 575 aa12.58□□□□□ -0.4
CPNE3-212ENST00000621783 TPCN1Q9ULQ1 816 aa12.58□□□□□ -0.4
CPNE3-212ENST00000621783 CLRN2A0PK11 232 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 SH2B2O14492 632 aaPredicted RBP12.57□□□□□ -0.4
CPNE3-212ENST00000621783 PRDM1O75626 825 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 MMP14P50281 582 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 FGD1P98174 961 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 PDE4BQ07343 736 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 TCP10Q12799 353 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 CUL4AQ13619 759 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 GPR162Q16538 588 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 C9orf131Q5VYM1 1079 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 MICALL2Q8IY33 904 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 FBXL16Q8N461 479 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 ESR2Q92731 530 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 DPF2Q92785 391 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 BRF1Q92994 677 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
CPNE3-212ENST00000621783 TMOD2Q9NZR1 351 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
CPNE3-212ENST00000621783 ZNF70Q9UC06 446 aaPredicted RBP12.57□□□□□ -0.4
CPNE3-212ENST00000621783 ATRNL1Q5VV63 1379 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 ENTPD3O75355 529 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 HSP90AA1P07900 732 aaKnown RBP12.56□□□□□ -0.4
CPNE3-212ENST00000621783 APOBRQ0VD83 1088 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 ST3GAL1Q11201 340 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 ME3Q16798 604 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 C16orf86Q6ZW13 317 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 TTC6Q86TZ1 520 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 ZFPM1Q8IX07 1006 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 GPC2Q8N158 579 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 SLC44A5Q8NCS7 719 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 TMEM87BQ96K49 555 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 ZSCAN31Q96LW9 406 aaPredicted RBP12.56□□□□□ -0.4
CPNE3-212ENST00000621783 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
CPNE3-212ENST00000621783 CNOT7Q9UIV1 285 aaKnown RBP12.56□□□□□ -0.4
CPNE3-212ENST00000621783 CNTNAP1P78357 1384 aa12.56□□□□□ -0.4
CPNE3-212ENST00000621783 WNT10BO00744 389 aa12.55□□□□□ -0.4
CPNE3-212ENST00000621783 RANBP6O60518 1105 aaKnown RBP12.55□□□□□ -0.4
CPNE3-212ENST00000621783 EGFRP00533 1210 aa12.55□□□□□ -0.4
CPNE3-212ENST00000621783 HLA-DOAP06340 250 aa12.55□□□□□ -0.4
CPNE3-212ENST00000621783 GABPAQ06546 454 aa12.55□□□□□ -0.4
CPNE3-212ENST00000621783 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
CPNE3-212ENST00000621783 SLKQ9H2G2 1235 aaPredicted RBP12.55□□□□□ -0.4
CPNE3-212ENST00000621783 VEZTQ9HBM0 779 aa12.55□□□□□ -0.4
CPNE3-212ENST00000621783 ANGEL1Q9UNK9 670 aaKnown RBP12.55□□□□□ -0.4
CPNE3-212ENST00000621783 MYH8P13535 1937 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 DDTLA6NHG4 134 aaPredicted RBP12.54□□□□□ -0.4
CPNE3-212ENST00000621783 TCP10L2B9ZVM9 353 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 IFIT3O14879 490 aaKnown RBP12.54□□□□□ -0.4
CPNE3-212ENST00000621783 MYO1BO43795 1136 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 GRIN3BO60391 1043 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 RASA1P20936 1047 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 CDK8P49336 464 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 NT5C2P49902 561 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 KIF4BQ2VIQ3 1234 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 NBPF9Q3BBW0 867 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 TBC1D10BQ4KMP7 808 aaPredicted RBP12.54□□□□□ -0.4
CPNE3-212ENST00000621783 FAM47AQ5JRC9 791 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 RBM26Q5T8P6 1007 aaKnown RBP12.54□□□□□ -0.4
CPNE3-212ENST00000621783 SH3BP5LQ7L8J4 393 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 SAMD7Q7Z3H4 446 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 CCDC83Q8IWF9 413 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 IGDCC4Q8TDY8 1250 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 ZKSCAN3Q9BRR0 538 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 UBAC1Q9BSL1 405 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 MTA3Q9BTC8 594 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 EHD4Q9H223 541 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 DHX36Q9H2U1 1008 aaKnown RBP12.54□□□□□ -0.4
CPNE3-212ENST00000621783 LY9Q9HBG7 655 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 MKNK2Q9HBH9 465 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
CPNE3-212ENST00000621783 KLF18A0A0U1RQI7 1052 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 TSPY2A6NKD2 308 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 GOLGA8BA8MQT2 603 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 DDNO94850 711 aaPredicted RBP12.53□□□□□ -0.4
CPNE3-212ENST00000621783 EVCP57679 992 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 STK3Q13188 491 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 SART3Q15020 963 aaKnown RBP12.53□□□□□ -0.4
CPNE3-212ENST00000621783 SEC23AQ15436 765 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 FKBP1CQ5VVH2 108 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 ZSCAN29Q8IWY8 852 aaPredicted RBP12.53□□□□□ -0.4
CPNE3-212ENST00000621783 NECAB1Q8N987 351 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 TRPM4Q8TD43 1214 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 GTF3C6Q969F1 213 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 ZSCAN10Q96SZ4 725 aaPredicted RBP12.53□□□□□ -0.4
CPNE3-212ENST00000621783 ZNF287Q9HBT7 754 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 SENP2Q9HC62 589 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 SERPINB13Q9UIV8 391 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms