RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 PEX10O60683 326 aa20.72■□□□□ 0.91
TARDBP-225ENST00000621715 JAG1P78504 1218 aa20.72■□□□□ 0.91
TARDBP-225ENST00000621715 SPP2Q13103 211 aa20.72■□□□□ 0.91
TARDBP-225ENST00000621715 SHROOM1Q2M3G4 852 aaPredicted RBP20.72■□□□□ 0.91
TARDBP-225ENST00000621715 SPATA5Q8NB90 893 aa20.72■□□□□ 0.91
TARDBP-225ENST00000621715 PXYLP1Q8TE99 480 aa20.72■□□□□ 0.91
TARDBP-225ENST00000621715 DIS3LQ8TF46 1054 aaKnown RBP20.72■□□□□ 0.91
TARDBP-225ENST00000621715 NEUROD6Q96NK8 337 aa20.72■□□□□ 0.91
TARDBP-225ENST00000621715 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.72■□□□□ 0.91
TARDBP-225ENST00000621715 PNMA6EA0A0J9YXQ4 647 aa20.71■□□□□ 0.91
TARDBP-225ENST00000621715 NPM3O75607 178 aaKnown RBP20.71■□□□□ 0.91
TARDBP-225ENST00000621715 CT47B1P0C2W7 299 aaPredicted RBP20.71■□□□□ 0.91
TARDBP-225ENST00000621715 MCAMP43121 646 aa20.71■□□□□ 0.91
TARDBP-225ENST00000621715 TRIM32Q13049 653 aa20.71■□□□□ 0.91
TARDBP-225ENST00000621715 MVPQ14764 893 aaKnown RBP20.71■□□□□ 0.91
TARDBP-225ENST00000621715 SPTY2D1Q68D10 685 aaPredicted RBP20.71■□□□□ 0.91
TARDBP-225ENST00000621715 SLF2Q8IX21 1173 aa20.71■□□□□ 0.91
TARDBP-225ENST00000621715 HTATIP2Q9BUP3 242 aa20.71■□□□□ 0.91
TARDBP-225ENST00000621715 OSBPL5Q9H0X9 879 aaPredicted RBP20.71■□□□□ 0.91
TARDBP-225ENST00000621715 TAOK2Q9UL54 1235 aa20.71■□□□□ 0.91
TARDBP-225ENST00000621715 COL2A1P02458 1487 aaPredicted RBP20.7■□□□□ 0.9
TARDBP-225ENST00000621715 ARID4AP29374 1257 aaPredicted RBP20.7■□□□□ 0.9
TARDBP-225ENST00000621715 HMGCS2P54868 508 aa20.7■□□□□ 0.9
TARDBP-225ENST00000621715 SH3RF3Q8TEJ3 882 aaPredicted RBP20.7■□□□□ 0.9
TARDBP-225ENST00000621715 CRISPLD2Q9H0B8 497 aa20.7■□□□□ 0.9
TARDBP-225ENST00000621715 AKAP2Q9Y2D5 859 aa20.7■□□□□ 0.9
TARDBP-225ENST00000621715 DNAH12Q6ZR08 3092 aa20.69■□□□□ 0.9
TARDBP-225ENST00000621715 SOX1O00570 391 aaPredicted RBP20.69■□□□□ 0.9
TARDBP-225ENST00000621715 FAM110CQ1W6H9 321 aa20.69■□□□□ 0.9
TARDBP-225ENST00000621715 ZNF280CQ8ND82 737 aa20.69■□□□□ 0.9
TARDBP-225ENST00000621715 GJD2Q9UKL4 321 aa20.69■□□□□ 0.9
TARDBP-225ENST00000621715 FOCADQ5VW36 1801 aa20.69■□□□□ 0.9
TARDBP-225ENST00000621715 TFRCP02786 760 aaKnown RBP20.68■□□□□ 0.9
TARDBP-225ENST00000621715 CAP2P40123 477 aa20.68■□□□□ 0.9
TARDBP-225ENST00000621715 ADGRA1Q86SQ6 560 aa20.68■□□□□ 0.9
TARDBP-225ENST00000621715 PROCA1Q8NCQ7 364 aaPredicted RBP20.68■□□□□ 0.9
TARDBP-225ENST00000621715 PAWRQ96IZ0 340 aaKnown RBP20.68■□□□□ 0.9
TARDBP-225ENST00000621715 ASCC2Q9H1I8 757 aaPredicted RBP20.68■□□□□ 0.9
TARDBP-225ENST00000621715 DNAJC18Q9H819 358 aa20.68■□□□□ 0.9
TARDBP-225ENST00000621715 LAMA2P24043 3122 aaKnown RBP20.68■□□□□ 0.9
TARDBP-225ENST00000621715 MAST2Q6P0Q8 1798 aa20.67■□□□□ 0.9
TARDBP-225ENST00000621715 GNAI3P08754 354 aa20.67■□□□□ 0.9
TARDBP-225ENST00000621715 TRIM27P14373 513 aa20.67■□□□□ 0.9
TARDBP-225ENST00000621715 MNX1P50219 401 aaPredicted RBP20.67■□□□□ 0.9
TARDBP-225ENST00000621715 ARHGAP45Q92619 1136 aa20.67■□□□□ 0.9
TARDBP-225ENST00000621715 SNRKQ9NRH2 765 aa20.67■□□□□ 0.9
TARDBP-225ENST00000621715 RAI14Q9P0K7 980 aa20.67■□□□□ 0.9
TARDBP-225ENST00000621715 POTEEQ6S8J3 1075 aa20.66■□□□□ 0.9
TARDBP-225ENST00000621715 TEX11Q8IYF3 940 aa20.66■□□□□ 0.9
TARDBP-225ENST00000621715 COA7Q96BR5 231 aa20.66■□□□□ 0.9
TARDBP-225ENST00000621715 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.66■□□□□ 0.9
TARDBP-225ENST00000621715 STAP2Q9UGK3 403 aa20.66■□□□□ 0.9
TARDBP-225ENST00000621715 HDAC5Q9UQL6 1122 aa20.66■□□□□ 0.9
TARDBP-225ENST00000621715 DDX60LQ5H9U9 1706 aaKnown RBP20.65■□□□□ 0.9
TARDBP-225ENST00000621715 BCAR3O75815 825 aa20.65■□□□□ 0.9
TARDBP-225ENST00000621715 SH3D19Q5HYK7 790 aa20.65■□□□□ 0.9
TARDBP-225ENST00000621715 TXNRD2Q9NNW7 524 aa20.65■□□□□ 0.9
TARDBP-225ENST00000621715 NR2E3Q9Y5X4 410 aa20.65■□□□□ 0.9
TARDBP-225ENST00000621715 EVI5O60447 810 aa20.64■□□□□ 0.89
TARDBP-225ENST00000621715 GSTO1P78417 241 aa20.64■□□□□ 0.89
TARDBP-225ENST00000621715 LRCH3Q96II8 777 aa20.64■□□□□ 0.89
TARDBP-225ENST00000621715 AATFQ9NY61 560 aaKnown RBP eCLIP20.64■□□□□ 0.89
TARDBP-225ENST00000621715 PNMA3Q9UL41 463 aa20.64■□□□□ 0.89
TARDBP-225ENST00000621715 USP17L5A8MUK1 530 aa20.63■□□□□ 0.89
TARDBP-225ENST00000621715 LDHCP07864 332 aa20.63■□□□□ 0.89
TARDBP-225ENST00000621715 MTMR2Q13614 643 aa20.63■□□□□ 0.89
TARDBP-225ENST00000621715 GORABQ5T7V8 394 aa20.63■□□□□ 0.89
TARDBP-225ENST00000621715 TRIB2Q92519 343 aa20.63■□□□□ 0.89
TARDBP-225ENST00000621715 CLUAP1Q96AJ1 413 aa20.63■□□□□ 0.89
TARDBP-225ENST00000621715 GNAI2P04899 355 aa20.62■□□□□ 0.89
TARDBP-225ENST00000621715 GCLCP48506 637 aaPredicted RBP20.62■□□□□ 0.89
TARDBP-225ENST00000621715 MAPKAPK5Q8IW41 473 aa20.62■□□□□ 0.89
TARDBP-225ENST00000621715 DBNDD2Q9BQY9 259 aa20.62■□□□□ 0.89
TARDBP-225ENST00000621715 LRP2BPQ9P2M1 347 aa20.62■□□□□ 0.89
TARDBP-225ENST00000621715 MORF4L1Q9UBU8 362 aa20.62■□□□□ 0.89
TARDBP-225ENST00000621715 FLT1P17948 1338 aa20.61■□□□□ 0.89
TARDBP-225ENST00000621715 MAP4K4O95819 1239 aaPredicted RBP20.61■□□□□ 0.89
TARDBP-225ENST00000621715 HMGCRP04035 888 aa20.61■□□□□ 0.89
TARDBP-225ENST00000621715 CYP2E1P05181 493 aaPredicted RBP20.61■□□□□ 0.89
TARDBP-225ENST00000621715 TGFBRAP1Q8WUH2 860 aa20.61■□□□□ 0.89
TARDBP-225ENST00000621715 P2RX7Q99572 595 aaKnown RBP20.61■□□□□ 0.89
TARDBP-225ENST00000621715 WDR18Q9BV38 432 aa20.61■□□□□ 0.89
TARDBP-225ENST00000621715 PI4KBQ9UBF8 816 aa20.61■□□□□ 0.89
TARDBP-225ENST00000621715 HERC5Q9UII4 1024 aaKnown RBP20.61■□□□□ 0.89
TARDBP-225ENST00000621715 GDF11O95390 407 aa20.6■□□□□ 0.89
TARDBP-225ENST00000621715 BACE1P56817 501 aa20.6■□□□□ 0.89
TARDBP-225ENST00000621715 ATF7IPQ6VMQ6 1270 aa20.6■□□□□ 0.89
TARDBP-225ENST00000621715 METTL16Q86W50 562 aaKnown RBP20.6■□□□□ 0.89
TARDBP-225ENST00000621715 FRAT1Q92837 279 aaPredicted RBP20.6■□□□□ 0.89
TARDBP-225ENST00000621715 PIH1D3Q9NQM4 214 aaKnown RBP20.6■□□□□ 0.89
TARDBP-225ENST00000621715 PALD1Q9ULE6 856 aa20.6■□□□□ 0.89
TARDBP-225ENST00000621715 UQCRFS1P1P0C7P4 283 aa20.59■□□□□ 0.89
TARDBP-225ENST00000621715 PPP4CP60510 307 aa20.59■□□□□ 0.89
TARDBP-225ENST00000621715 G3BP1Q13283 466 aaKnown RBP eCLIP20.59■□□□□ 0.895e-9■□□□□ 10.1
TARDBP-225ENST00000621715 POLA2Q14181 598 aa20.59■□□□□ 0.89
TARDBP-225ENST00000621715 TNNI3KQ59H18 835 aa20.59■□□□□ 0.89
TARDBP-225ENST00000621715 NAA16Q6N069 864 aaPredicted RBP20.59■□□□□ 0.89
TARDBP-225ENST00000621715 NECAB2Q7Z6G3 386 aa20.59■□□□□ 0.89
TARDBP-225ENST00000621715 C7orf61Q8IZ16 206 aa20.59■□□□□ 0.89
TARDBP-225ENST00000621715 TMEM57Q8N5G2 664 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms