RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 A0A1B0GVL5 298 aa12.28□□□□□ -0.44
VPS11-208ENST00000621676 CDC25AP30304 524 aa12.28□□□□□ -0.44
VPS11-208ENST00000621676 ZSCAN23Q3MJ62 389 aa12.28□□□□□ -0.44
VPS11-208ENST00000621676 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
VPS11-208ENST00000621676 CRACR2BQ8N4Y2 399 aaPredicted RBP12.28□□□□□ -0.44
VPS11-208ENST00000621676 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
VPS11-208ENST00000621676 RBAK-RBAKDNI3L0D1 243 aa12.28□□□□□ -0.44
VPS11-208ENST00000621676 ESR2Q92731 530 aa12.28□□□□□ -0.44
VPS11-208ENST00000621676 PGBD1Q96JS3 809 aa12.28□□□□□ -0.44
VPS11-208ENST00000621676 PLIN2Q99541 437 aa12.28□□□□□ -0.44
VPS11-208ENST00000621676 DDX4Q9NQI0 724 aaKnown RBP12.28□□□□□ -0.44
VPS11-208ENST00000621676 KIF28PB7ZC32 967 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 ECE2O60344 883 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 NPR1P16066 1061 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 PTPN21Q16825 1174 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 ENAHQ8N8S7 591 aaPredicted RBP12.27□□□□□ -0.44
VPS11-208ENST00000621676 WDR66Q8TBY9 1149 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 OXER1Q8TDS5 423 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 STAMQ92783 540 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 CLIC6Q96NY7 704 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 DACT1Q9NYF0 836 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 LEMD3Q9Y2U8 911 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 ATP6V0A2Q9Y487 856 aa12.27□□□□□ -0.44
VPS11-208ENST00000621676 MYO5AQ9Y4I1 1855 aaKnown RBP12.27□□□□□ -0.45
VPS11-208ENST00000621676 BAG3O95817 575 aa12.27□□□□□ -0.45
VPS11-208ENST00000621676 RTN1Q16799 776 aa12.27□□□□□ -0.45
VPS11-208ENST00000621676 TDRD7Q8NHU6 1098 aaKnown RBP12.27□□□□□ -0.45
VPS11-208ENST00000621676 CLIC4Q9Y696 253 aa12.27□□□□□ -0.45
VPS11-208ENST00000621676 HMGB1P09429 215 aaKnown RBP12.27□□□□□ -0.45
VPS11-208ENST00000621676 ATP2B4P23634 1241 aa12.27□□□□□ -0.45
VPS11-208ENST00000621676 ALDH1B1P30837 517 aa12.27□□□□□ -0.45
VPS11-208ENST00000621676 ZNF654Q8IZM8 581 aa12.27□□□□□ -0.45
VPS11-208ENST00000621676 IGDCC4Q8TDY8 1250 aa12.27□□□□□ -0.45
VPS11-208ENST00000621676 INTS4Q96HW7 963 aaKnown RBP12.27□□□□□ -0.45
VPS11-208ENST00000621676 LY9Q9HBG7 655 aa12.27□□□□□ -0.45
VPS11-208ENST00000621676 ADAMTS3O15072 1205 aa12.26□□□□□ -0.45
VPS11-208ENST00000621676 KRT85P78386 507 aa12.26□□□□□ -0.45
VPS11-208ENST00000621676 DAGLAQ9Y4D2 1042 aa12.26□□□□□ -0.45
VPS11-208ENST00000621676 NRAPQ86VF7 1730 aa12.26□□□□□ -0.45
VPS11-208ENST00000621676 STK38Q15208 465 aa12.26□□□□□ -0.45
VPS11-208ENST00000621676 SH2B2O14492 632 aaPredicted RBP12.26□□□□□ -0.45
VPS11-208ENST00000621676 PFKFB2O60825 505 aa12.26□□□□□ -0.45
VPS11-208ENST00000621676 RASSF7Q02833 373 aa12.26□□□□□ -0.45
VPS11-208ENST00000621676 TRIM29Q14134 588 aa12.26□□□□□ -0.45
VPS11-208ENST00000621676 NLGN2Q8NFZ4 835 aa12.26□□□□□ -0.45
VPS11-208ENST00000621676 FBXO41Q8TF61 875 aa12.26□□□□□ -0.45
VPS11-208ENST00000621676 EGFRP00533 1210 aa12.25□□□□□ -0.45
VPS11-208ENST00000621676 NUP88Q99567 741 aaPredicted RBP12.25□□□□□ -0.45
VPS11-208ENST00000621676 TRIM34Q9BYJ4 488 aa12.25□□□□□ -0.45
VPS11-208ENST00000621676 CABP5Q9NP86 173 aa12.25□□□□□ -0.45
VPS11-208ENST00000621676 CLIP2Q9UDT6 1046 aa12.25□□□□□ -0.45
VPS11-208ENST00000621676 TJP1Q07157 1748 aa12.25□□□□□ -0.45
VPS11-208ENST00000621676 COBLO75128 1261 aa12.25□□□□□ -0.45
VPS11-208ENST00000621676 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
VPS11-208ENST00000621676 CPLX2Q6PUV4 134 aaKnown RBP12.25□□□□□ -0.45
VPS11-208ENST00000621676 AMOTL1Q8IY63 956 aa12.25□□□□□ -0.45
VPS11-208ENST00000621676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.25□□□□□ -0.45
VPS11-208ENST00000621676 PRMT6Q96LA8 375 aaPredicted RBP12.25□□□□□ -0.45
VPS11-208ENST00000621676 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.25□□□□□ -0.45
VPS11-208ENST00000621676 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
VPS11-208ENST00000621676 COL22A1Q8NFW1 1626 aaPredicted RBP12.25□□□□□ -0.45
VPS11-208ENST00000621676 NR1I2O75469 434 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 DHX8Q14562 1220 aaKnown RBP12.24□□□□□ -0.45
VPS11-208ENST00000621676 KRT40Q6A162 431 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 TTLL6Q8N841 843 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 ZSCAN10Q96SZ4 725 aaPredicted RBP12.24□□□□□ -0.45
VPS11-208ENST00000621676 RBSNQ9H1K0 784 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 DNAH12Q6ZR08 3092 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 PDE4BQ07343 736 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 SSRP1Q08945 709 aaKnown RBP12.24□□□□□ -0.45
VPS11-208ENST00000621676 KCTD1Q719H9 257 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 FANCBQ8NB91 859 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 DGKZQ13574 1117 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 SAMD7Q7Z3H4 446 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 HEATR3Q7Z4Q2 680 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 CATIPQ7Z7H3 387 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 SP8Q8IXZ3 490 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 ZNF830Q96NB3 372 aaPredicted RBP12.24□□□□□ -0.45
VPS11-208ENST00000621676 EYA3Q99504 573 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 KAT14Q9H8E8 782 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 GRPEL1Q9HAV7 217 aa12.24□□□□□ -0.45
VPS11-208ENST00000621676 PDCP20941 246 aa12.23□□□□□ -0.45
VPS11-208ENST00000621676 TBC1D10BQ4KMP7 808 aaPredicted RBP12.23□□□□□ -0.45
VPS11-208ENST00000621676 SPTY2D1Q68D10 685 aaPredicted RBP12.23□□□□□ -0.45
VPS11-208ENST00000621676 ASTN2O75129 1339 aaPredicted RBP12.23□□□□□ -0.45
VPS11-208ENST00000621676 CCDC96Q2M329 555 aa12.23□□□□□ -0.45
VPS11-208ENST00000621676 SPC24Q8NBT2 197 aa12.23□□□□□ -0.45
VPS11-208ENST00000621676 SDF4Q9BRK5 362 aa12.23□□□□□ -0.45
VPS11-208ENST00000621676 KRT23Q9C075 422 aa12.23□□□□□ -0.45
VPS11-208ENST00000621676 ZNF174Q15697 407 aa12.22□□□□□ -0.45
VPS11-208ENST00000621676 ARHGAP27Q6ZUM4 889 aa12.22□□□□□ -0.45
VPS11-208ENST00000621676 GJA10Q969M2 543 aa12.22□□□□□ -0.45
VPS11-208ENST00000621676 EEF2KMTQ96G04 330 aa12.22□□□□□ -0.45
VPS11-208ENST00000621676 DDTLA6NHG4 134 aaPredicted RBP12.22□□□□□ -0.45
VPS11-208ENST00000621676 CASP1P29466 404 aa12.22□□□□□ -0.45
VPS11-208ENST00000621676 CDK8P49336 464 aa12.22□□□□□ -0.45
VPS11-208ENST00000621676 GRIN1Q05586 938 aa12.22□□□□□ -0.45
VPS11-208ENST00000621676 TRIM22Q8IYM9 498 aa12.22□□□□□ -0.45
VPS11-208ENST00000621676 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
VPS11-208ENST00000621676 LEO1Q8WVC0 666 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms