RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 FLT3LGP49771 235 aa27.12■■□□□ 1.93
SRRT-218ENST00000620394 GORABQ5T7V8 394 aa27.12■■□□□ 1.93
SRRT-218ENST00000620394 DDX4Q9NQI0 724 aaKnown RBP27.12■■□□□ 1.93
SRRT-218ENST00000620394 TNPO2O14787 897 aaKnown RBP27.11■■□□□ 1.93
SRRT-218ENST00000620394 NPM3O75607 178 aaKnown RBP27.11■■□□□ 1.93
SRRT-218ENST00000620394 INHAP05111 366 aa27.11■■□□□ 1.93
SRRT-218ENST00000620394 UQCRFS1P1P0C7P4 283 aa27.11■■□□□ 1.93
SRRT-218ENST00000620394 RHBDL3P58872 404 aa27.11■■□□□ 1.93
SRRT-218ENST00000620394 MAP3K10Q02779 954 aa27.11■■□□□ 1.93
SRRT-218ENST00000620394 IRF5Q13568 498 aa27.11■■□□□ 1.93
SRRT-218ENST00000620394 GADL1Q6ZQY3 521 aa27.11■■□□□ 1.93
SRRT-218ENST00000620394 SH3BP5LQ7L8J4 393 aa27.11■■□□□ 1.93
SRRT-218ENST00000620394 ITPRIPQ8IWB1 547 aa27.11■■□□□ 1.93
SRRT-218ENST00000620394 SMCR8Q8TEV9 937 aaPredicted RBP27.11■■□□□ 1.93
SRRT-218ENST00000620394 NSUN4Q96CB9 384 aaKnown RBP27.11■■□□□ 1.93
SRRT-218ENST00000620394 ALPK3Q96L96 1907 aa27.11■■□□□ 1.93
SRRT-218ENST00000620394 EVI5O60447 810 aa27.1■■□□□ 1.93
SRRT-218ENST00000620394 TNNI3KQ59H18 835 aa27.1■■□□□ 1.93
SRRT-218ENST00000620394 C1orf115Q9H7X2 142 aa27.1■■□□□ 1.93
SRRT-218ENST00000620394 NOP58Q9Y2X3 529 aaKnown RBP27.1■■□□□ 1.93
SRRT-218ENST00000620394 AFG3L2Q9Y4W6 797 aa27.1■■□□□ 1.93
SRRT-218ENST00000620394 FPGT-TNNI3KV9GXZ4 949 aa27.1■■□□□ 1.93
SRRT-218ENST00000620394 LOC285556D6RIA3 1793 aa27.09■■□□□ 1.93
SRRT-218ENST00000620394 CDK5RAP2Q96SN8 1893 aa27.09■■□□□ 1.93
SRRT-218ENST00000620394 MYO5AQ9Y4I1 1855 aaKnown RBP27.09■■□□□ 1.93
SRRT-218ENST00000620394 MAP4K4O95819 1239 aaPredicted RBP27.09■■□□□ 1.93
SRRT-218ENST00000620394 ELNP15502 786 aa27.09■■□□□ 1.93
SRRT-218ENST00000620394 FOCADQ5VW36 1801 aa27.09■■□□□ 1.93
SRRT-218ENST00000620394 GSTO1P78417 241 aa27.08■■□□□ 1.93
SRRT-218ENST00000620394 PAK6Q9NQU5 681 aaPredicted RBP27.08■■□□□ 1.93
SRRT-218ENST00000620394 DDTLA6NHG4 134 aaPredicted RBP27.07■■□□□ 1.92
SRRT-218ENST00000620394 CTNND1O60716 968 aaKnown RBP27.07■■□□□ 1.92
SRRT-218ENST00000620394 TBC1D9Q6ZT07 1266 aa27.07■■□□□ 1.92
SRRT-218ENST00000620394 ZSCAN29Q8IWY8 852 aaPredicted RBP27.07■■□□□ 1.92
SRRT-218ENST00000620394 DEFB118Q96PH6 123 aa27.07■■□□□ 1.92
SRRT-218ENST00000620394 ATAD5Q96QE3 1844 aa27.06■■□□□ 1.92
SRRT-218ENST00000620394 SURF6O75683 361 aaKnown RBP27.06■■□□□ 1.92
SRRT-218ENST00000620394 LDHCP07864 332 aa27.06■■□□□ 1.92
SRRT-218ENST00000620394 ZNF512BQ96KM6 892 aaPredicted RBP27.06■■□□□ 1.92
SRRT-218ENST00000620394 DBNDD2Q9BQY9 259 aa27.06■■□□□ 1.92
SRRT-218ENST00000620394 AGTPBP1Q9UPW5 1226 aa27.06■■□□□ 1.92
SRRT-218ENST00000620394 SIPA1L1O43166 1804 aa27.05■■□□□ 1.92
SRRT-218ENST00000620394 TFRCP02786 760 aaKnown RBP27.05■■□□□ 1.92
SRRT-218ENST00000620394 OS9Q13438 667 aaPredicted RBP27.05■■□□□ 1.92
SRRT-218ENST00000620394 PICALMQ13492 652 aa27.05■■□□□ 1.92
SRRT-218ENST00000620394 COA7Q96BR5 231 aa27.05■■□□□ 1.92
SRRT-218ENST00000620394 PNMA3Q9UL41 463 aa27.05■■□□□ 1.92
SRRT-218ENST00000620394 DOCK3Q8IZD9 2030 aa27.05■■□□□ 1.92
SRRT-218ENST00000620394 TRIM75PA6NK02 468 aa27.04■■□□□ 1.92
SRRT-218ENST00000620394 FAM110CQ1W6H9 321 aa27.04■■□□□ 1.92
SRRT-218ENST00000620394 CEP85Q6P2H3 762 aa27.04■■□□□ 1.92
SRRT-218ENST00000620394 CRISPLD2Q9H0B8 497 aa27.04■■□□□ 1.92
SRRT-218ENST00000620394 RAI14Q9P0K7 980 aa27.04■■□□□ 1.92
SRRT-218ENST00000620394 IGSF3O75054 1194 aa27.03■■□□□ 1.92
SRRT-218ENST00000620394 CCDC158Q5M9N0 1113 aa27.03■■□□□ 1.92
SRRT-218ENST00000620394 TTC39AQ5SRH9 613 aa27.03■■□□□ 1.92
SRRT-218ENST00000620394 TBC1D12O60347 775 aa27.02■■□□□ 1.92
SRRT-218ENST00000620394 ANKRD13CQ8N6S4 541 aa27.02■■□□□ 1.92
SRRT-218ENST00000620394 LRP2BPQ9P2M1 347 aa27.02■■□□□ 1.92
SRRT-218ENST00000620394 DBNLQ9UJU6 430 aaKnown RBP27.02■■□□□ 1.92
SRRT-218ENST00000620394 TAOK2Q9UL54 1235 aa27.02■■□□□ 1.92
SRRT-218ENST00000620394 SOX1O00570 391 aaPredicted RBP27■■□□□ 1.91
SRRT-218ENST00000620394 SLURP2P0DP57 97 aa27■■□□□ 1.91
SRRT-218ENST00000620394 NECAB2Q7Z6G3 386 aa27■■□□□ 1.91
SRRT-218ENST00000620394 ANKLE1Q8NAG6 615 aa27■■□□□ 1.91
SRRT-218ENST00000620394 PROCA1Q8NCQ7 364 aaPredicted RBP27■■□□□ 1.91
SRRT-218ENST00000620394 SLC17A8Q8NDX2 589 aa27■■□□□ 1.91
SRRT-218ENST00000620394 PANK1Q8TE04 598 aa27■■□□□ 1.91
SRRT-218ENST00000620394 PAWRQ96IZ0 340 aaKnown RBP27■■□□□ 1.91
SRRT-218ENST00000620394 XRN2Q9H0D6 950 aaKnown RBP eCLIP27■■□□□ 1.91
SRRT-218ENST00000620394 OSBPL5Q9H0X9 879 aaPredicted RBP27■■□□□ 1.91
SRRT-218ENST00000620394 DDX60LQ5H9U9 1706 aaKnown RBP26.99■■□□□ 1.91
SRRT-218ENST00000620394 CYP2E1P05181 493 aaPredicted RBP26.99■■□□□ 1.91
SRRT-218ENST00000620394 SNRKQ9NRH2 765 aa26.99■■□□□ 1.91
SRRT-218ENST00000620394 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.99■■□□□ 1.91
SRRT-218ENST00000620394 HMGCRP04035 888 aa26.98■■□□□ 1.91
SRRT-218ENST00000620394 TREML2Q5T2D2 321 aa26.98■■□□□ 1.91
SRRT-218ENST00000620394 NAA16Q6N069 864 aaPredicted RBP26.98■■□□□ 1.91
SRRT-218ENST00000620394 EAF2Q96CJ1 260 aaPredicted RBP26.98■■□□□ 1.91
SRRT-218ENST00000620394 TBC1D2Q9BYX2 928 aa26.98■■□□□ 1.91
SRRT-218ENST00000620394 TLR7Q9NYK1 1049 aaKnown RBP26.98■■□□□ 1.91
SRRT-218ENST00000620394 DLL1O00548 723 aa26.97■■□□□ 1.91
SRRT-218ENST00000620394 GCLCP48506 637 aaPredicted RBP26.97■■□□□ 1.91
SRRT-218ENST00000620394 TEX11Q8IYF3 940 aa26.97■■□□□ 1.91
SRRT-218ENST00000620394 LRCH3Q96II8 777 aa26.97■■□□□ 1.91
SRRT-218ENST00000620394 STAP2Q9UGK3 403 aa26.97■■□□□ 1.91
SRRT-218ENST00000620394 LAMA3Q16787 3333 aa26.96■■□□□ 1.91
SRRT-218ENST00000620394 MS4A1P11836 297 aa26.96■■□□□ 1.91
SRRT-218ENST00000620394 PLCG2P16885 1265 aa26.96■■□□□ 1.91
SRRT-218ENST00000620394 PPP4CP60510 307 aa26.96■■□□□ 1.91
SRRT-218ENST00000620394 PABPC4Q13310 644 aaKnown RBP eCLIP26.96■■□□□ 1.91
SRRT-218ENST00000620394 CCDC84Q86UT8 332 aaPredicted RBP26.96■■□□□ 1.91
SRRT-218ENST00000620394 DIS3LQ8TF46 1054 aaKnown RBP26.96■■□□□ 1.91
SRRT-218ENST00000620394 ZAP70P43403 619 aa26.95■■□□□ 1.9
SRRT-218ENST00000620394 ADGRA1Q86SQ6 560 aa26.95■■□□□ 1.9
SRRT-218ENST00000620394 ERC1Q8IUD2 1116 aa26.95■■□□□ 1.9
SRRT-218ENST00000620394 SH3RF3Q8TEJ3 882 aaPredicted RBP26.95■■□□□ 1.9
SRRT-218ENST00000620394 NOL10Q9BSC4 688 aaKnown RBP26.95■■□□□ 1.9
SRRT-218ENST00000620394 BAG3O95817 575 aa26.94■■□□□ 1.9
SRRT-218ENST00000620394 BMP8BP34820 402 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms