RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ZFPM1Q8IX07 1006 aa25.54■■□□□ 1.68
SGMS1-210ENST00000619438 CLMNQ96JQ2 1002 aa25.54■■□□□ 1.68
SGMS1-210ENST00000619438 AKAP11Q9UKA4 1901 aa25.53■■□□□ 1.68
SGMS1-210ENST00000619438 WDHD1O75717 1129 aaPredicted RBP25.53■■□□□ 1.68
SGMS1-210ENST00000619438 BAG4O95429 457 aaKnown RBP25.53■■□□□ 1.68
SGMS1-210ENST00000619438 RHBDL3P58872 404 aa25.53■■□□□ 1.68
SGMS1-210ENST00000619438 TICAM2Q86XR7 235 aa25.53■■□□□ 1.68
SGMS1-210ENST00000619438 MAGEB6Q8N7X4 407 aa25.53■■□□□ 1.68
SGMS1-210ENST00000619438 PLCG2P16885 1265 aa25.52■■□□□ 1.68
SGMS1-210ENST00000619438 MAP3K9P80192 1104 aa25.52■■□□□ 1.68
SGMS1-210ENST00000619438 TEX11Q8IYF3 940 aa25.52■■□□□ 1.68
SGMS1-210ENST00000619438 TTC14Q96N46 770 aa25.52■■□□□ 1.68
SGMS1-210ENST00000619438 TM6SF1Q9BZW5 370 aa25.52■■□□□ 1.68
SGMS1-210ENST00000619438 CSADQ9Y600 493 aa25.52■■□□□ 1.68
SGMS1-210ENST00000619438 LBX1P52954 281 aa25.52■■□□□ 1.68
SGMS1-210ENST00000619438 REM2Q8IYK8 340 aaPredicted RBP25.52■■□□□ 1.68
SGMS1-210ENST00000619438 CSRNP1Q96S65 589 aa25.52■■□□□ 1.68
SGMS1-210ENST00000619438 CCDC171Q6TFL3 1326 aa25.51■■□□□ 1.67
SGMS1-210ENST00000619438 SH3RF3Q8TEJ3 882 aaPredicted RBP25.51■■□□□ 1.67
SGMS1-210ENST00000619438 DDX4Q9NQI0 724 aaKnown RBP25.51■■□□□ 1.67
SGMS1-210ENST00000619438 RPAP1Q9BWH6 1393 aaPredicted RBP25.5■■□□□ 1.67
SGMS1-210ENST00000619438 L1TD1Q5T7N2 865 aaKnown RBP25.5■■□□□ 1.67
SGMS1-210ENST00000619438 ADGRA1Q86SQ6 560 aa25.5■■□□□ 1.67
SGMS1-210ENST00000619438 RASEFQ8IZ41 740 aa25.5■■□□□ 1.67
SGMS1-210ENST00000619438 WRNIP1Q96S55 665 aa25.5■■□□□ 1.67
SGMS1-210ENST00000619438 ZNF341Q9BYN7 854 aa25.5■■□□□ 1.67
SGMS1-210ENST00000619438 UPF3BQ9BZI7 483 aaKnown RBP25.5■■□□□ 1.67
SGMS1-210ENST00000619438 ELP3Q9H9T3 547 aa25.5■■□□□ 1.67
SGMS1-210ENST00000619438 PAG1Q9NWQ8 432 aa25.5■■□□□ 1.67
SGMS1-210ENST00000619438 TSKSQ9UJT2 592 aa25.5■■□□□ 1.67
SGMS1-210ENST00000619438 HSPA8P11142 646 aaKnown RBP25.49■■□□□ 1.67
SGMS1-210ENST00000619438 PPP4CP60510 307 aa25.49■■□□□ 1.67
SGMS1-210ENST00000619438 PTH1RQ03431 593 aa25.49■■□□□ 1.67
SGMS1-210ENST00000619438 NMIQ13287 307 aaPredicted RBP25.49■■□□□ 1.67
SGMS1-210ENST00000619438 NECTIN1Q15223 517 aa25.49■■□□□ 1.67
SGMS1-210ENST00000619438 SLC9C2Q5TAH2 1124 aa25.49■■□□□ 1.67
SGMS1-210ENST00000619438 SPRYD7Q5W111 196 aa25.49■■□□□ 1.67
SGMS1-210ENST00000619438 MAP4K1Q92918 833 aa25.49■■□□□ 1.67
SGMS1-210ENST00000619438 CA12O43570 354 aa25.48■■□□□ 1.67
SGMS1-210ENST00000619438 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.48■■□□□ 1.67
SGMS1-210ENST00000619438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.48■■□□□ 1.67
SGMS1-210ENST00000619438 EDC3Q96F86 508 aaKnown RBP25.48■■□□□ 1.67
SGMS1-210ENST00000619438 HAUS7Q99871 368 aa25.48■■□□□ 1.67
SGMS1-210ENST00000619438 FSD1Q9BTV5 496 aa25.48■■□□□ 1.67
SGMS1-210ENST00000619438 ISY1Q9ULR0 285 aaKnown RBP25.48■■□□□ 1.67
SGMS1-210ENST00000619438 FSD2A1L4K1 749 aa25.48■■□□□ 1.67
SGMS1-210ENST00000619438 TMED8Q6PL24 325 aaPredicted RBP25.48■■□□□ 1.67
SGMS1-210ENST00000619438 MIGA1Q8NAN2 632 aa25.48■■□□□ 1.67
SGMS1-210ENST00000619438 NPM3O75607 178 aaKnown RBP25.47■■□□□ 1.67
SGMS1-210ENST00000619438 VGLL4Q14135 290 aa25.47■■□□□ 1.67
SGMS1-210ENST00000619438 TGFBRAP1Q8WUH2 860 aa25.47■■□□□ 1.67
SGMS1-210ENST00000619438 WNK4Q96J92 1243 aa25.47■■□□□ 1.67
SGMS1-210ENST00000619438 ZDHHC9Q9Y397 364 aa25.47■■□□□ 1.67
SGMS1-210ENST00000619438 OTOFQ9HC10 1997 aa25.46■■□□□ 1.67
SGMS1-210ENST00000619438 DDTLA6NHG4 134 aaPredicted RBP25.46■■□□□ 1.67
SGMS1-210ENST00000619438 ZBTB48P10074 688 aaPredicted RBP25.46■■□□□ 1.67
SGMS1-210ENST00000619438 DYNLL1P63167 89 aaKnown RBP25.46■■□□□ 1.67
SGMS1-210ENST00000619438 ZKSCAN4Q969J2 545 aaPredicted RBP25.46■■□□□ 1.67
SGMS1-210ENST00000619438 FAM227BQ96M60 508 aa25.46■■□□□ 1.67
SGMS1-210ENST00000619438 SREBF2Q12772 1141 aa25.45■■□□□ 1.67
SGMS1-210ENST00000619438 PKP1Q13835 747 aa25.45■■□□□ 1.67
SGMS1-210ENST00000619438 SH3BP5LQ7L8J4 393 aa25.45■■□□□ 1.67
SGMS1-210ENST00000619438 CERS3Q8IU89 383 aa25.45■■□□□ 1.67
SGMS1-210ENST00000619438 OPTNQ96CV9 577 aa25.45■■□□□ 1.67
SGMS1-210ENST00000619438 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.45■■□□□ 1.675e-6■■■■□ 23.1
SGMS1-210ENST00000619438 ZSWIM6Q9HCJ5 1215 aa25.45■■□□□ 1.67
SGMS1-210ENST00000619438 PRDM10Q9NQV6 1147 aa25.45■■□□□ 1.67
SGMS1-210ENST00000619438 TRPA1O75762 1119 aa25.45■■□□□ 1.66
SGMS1-210ENST00000619438 OSBPL5Q9H0X9 879 aaPredicted RBP25.45■■□□□ 1.66
SGMS1-210ENST00000619438 PDE6AP16499 860 aa25.44■■□□□ 1.66
SGMS1-210ENST00000619438 VPS53Q5VIR6 699 aa25.44■■□□□ 1.66
SGMS1-210ENST00000619438 MAPKAPK5Q8IW41 473 aa25.44■■□□□ 1.66
SGMS1-210ENST00000619438 MYO5AQ9Y4I1 1855 aaKnown RBP25.44■■□□□ 1.66
SGMS1-210ENST00000619438 A0A0D9SFI3 127 aa25.43■■□□□ 1.66
SGMS1-210ENST00000619438 MANSC4A6NHS7 340 aaPredicted RBP25.43■■□□□ 1.66
SGMS1-210ENST00000619438 BRD1O95696 1058 aa25.43■■□□□ 1.66
SGMS1-210ENST00000619438 ZKSCAN1P17029 563 aaPredicted RBP25.43■■□□□ 1.66
SGMS1-210ENST00000619438 INHBEP58166 350 aa25.43■■□□□ 1.66
SGMS1-210ENST00000619438 RNF186Q9NXI6 227 aa25.43■■□□□ 1.66
SGMS1-210ENST00000619438 LIMCH1Q9UPQ0 1083 aa25.43■■□□□ 1.66
SGMS1-210ENST00000619438 RBM8AQ9Y5S9 174 aaKnown RBP25.43■■□□□ 1.66
SGMS1-210ENST00000619438 ZNF532Q9HCE3 1301 aa25.42■■□□□ 1.66
SGMS1-210ENST00000619438 INPP5BP32019 993 aa25.42■■□□□ 1.66
SGMS1-210ENST00000619438 USP5P45974 858 aa25.42■■□□□ 1.66
SGMS1-210ENST00000619438 TM4SF4P48230 202 aa25.42■■□□□ 1.66
SGMS1-210ENST00000619438 OTUD5Q96G74 571 aa25.42■■□□□ 1.66
SGMS1-210ENST00000619438 MAGEB6P1A0A0J9YX57 407 aa25.42■■□□□ 1.66
SGMS1-210ENST00000619438 KLHL40Q2TBA0 621 aa25.42■■□□□ 1.66
SGMS1-210ENST00000619438 CREB3L3Q68CJ9 461 aa25.42■■□□□ 1.66
SGMS1-210ENST00000619438 TNS4Q8IZW8 715 aa25.42■■□□□ 1.66
SGMS1-210ENST00000619438 CASP8AP2Q9UKL3 1982 aa25.41■■□□□ 1.66
SGMS1-210ENST00000619438 GOLGA6L3A6NEY3 463 aa25.41■■□□□ 1.66
SGMS1-210ENST00000619438 AK2P54819 239 aa25.41■■□□□ 1.66
SGMS1-210ENST00000619438 TSGA10IPQ3SY00 556 aa25.41■■□□□ 1.66
SGMS1-210ENST00000619438 ERO1BQ86YB8 467 aa25.41■■□□□ 1.66
SGMS1-210ENST00000619438 CNKSR2Q8WXI2 1034 aa25.41■■□□□ 1.66
SGMS1-210ENST00000619438 DHX36Q9H2U1 1008 aaKnown RBP25.41■■□□□ 1.66
SGMS1-210ENST00000619438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.41■■□□□ 1.66
SGMS1-210ENST00000619438 ZNF112Q9UJU3 913 aa25.41■■□□□ 1.66
SGMS1-210ENST00000619438 CASTP20810 708 aaKnown RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms