RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 SERTAD1Q9UHV2 236 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 HOOK1Q9UJC3 728 aaKnown RBP23.38■■□□□ 1.33
NEK3-208ENST00000618534 STRCP1A6NGW2 1772 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 EFCAB8A8MWE9 144 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 POLR2DO15514 142 aaKnown RBP23.38■■□□□ 1.33
NEK3-208ENST00000618534 ZNF18P17022 549 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 IFNAR1P17181 557 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 PLA2G4AP47712 749 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 ALX1Q15699 326 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 TMCO3Q6UWJ1 677 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 ELOA2Q8IYF1 753 aaPredicted RBP23.38■■□□□ 1.33
NEK3-208ENST00000618534 GRAMD1CQ8IYS0 662 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 IFNL3Q8IZI9 196 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 TC2NQ8N9U0 490 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 WDR24Q96S15 920 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 NAPBQ9H115 298 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 ASAP1Q9ULH1 1129 aa23.38■■□□□ 1.33
NEK3-208ENST00000618534 CHD4Q14839 1912 aa23.37■■□□□ 1.33
NEK3-208ENST00000618534 ADKP55263 362 aaKnown RBP23.37■■□□□ 1.33
NEK3-208ENST00000618534 TOGARAM2Q6ZUX3 1019 aa23.37■■□□□ 1.33
NEK3-208ENST00000618534 CADPS2Q86UW7 1296 aa23.37■■□□□ 1.33
NEK3-208ENST00000618534 NOL10Q9BSC4 688 aaKnown RBP23.37■■□□□ 1.33
NEK3-208ENST00000618534 MBD4O95243 580 aa23.37■■□□□ 1.33
NEK3-208ENST00000618534 PTPREP23469 700 aa23.37■■□□□ 1.33
NEK3-208ENST00000618534 SAFBQ15424 915 aaKnown RBP eCLIP23.37■■□□□ 1.33
NEK3-208ENST00000618534 WASF1Q92558 559 aa23.37■■□□□ 1.33
NEK3-208ENST00000618534 PATL2C9JE40 543 aaKnown RBP23.36■■□□□ 1.33
NEK3-208ENST00000618534 IRS4O14654 1257 aaPredicted RBP23.36■■□□□ 1.33
NEK3-208ENST00000618534 CDK11BP21127 795 aaKnown RBP23.36■■□□□ 1.33
NEK3-208ENST00000618534 GNG11P61952 73 aa23.36■■□□□ 1.33
NEK3-208ENST00000618534 SPECC1LQ69YQ0 1117 aa23.36■■□□□ 1.33
NEK3-208ENST00000618534 MPHOSPH8Q99549 860 aa23.36■■□□□ 1.33
NEK3-208ENST00000618534 MYH3P11055 1940 aa23.36■■□□□ 1.33
NEK3-208ENST00000618534 UQCRFS1P1P0C7P4 283 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 NT5DC1Q5TFE4 455 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 TAF3Q5VWG9 929 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 HELBQ8NG08 1087 aaPredicted RBP23.35■■□□□ 1.33
NEK3-208ENST00000618534 SMARCE1Q969G3 411 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 EPC1Q9H2F5 836 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 ARMT1Q9H993 441 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 STX10O60499 249 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 CASQ1P31415 396 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 SARSP49591 514 aaKnown RBP23.35■■□□□ 1.33
NEK3-208ENST00000618534 MORC3Q14149 939 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 MAGEB6Q8N7X4 407 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 MLKLQ8NB16 471 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 ENOX1Q8TC92 643 aaKnown RBP23.35■■□□□ 1.33
NEK3-208ENST00000618534 ZKSCAN3Q9BRR0 538 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 PCDHB6Q9Y5E3 794 aa23.35■■□□□ 1.33
NEK3-208ENST00000618534 SEC31AO94979 1220 aaKnown RBP23.34■■□□□ 1.33
NEK3-208ENST00000618534 NR5A1Q13285 461 aa23.34■■□□□ 1.33
NEK3-208ENST00000618534 AKNAD1Q5T1N1 836 aa23.34■■□□□ 1.33
NEK3-208ENST00000618534 CCDC82Q8N4S0 544 aa23.34■■□□□ 1.33
NEK3-208ENST00000618534 MED15Q96RN5 788 aa23.34■■□□□ 1.33
NEK3-208ENST00000618534 ERICH4A6NGS2 130 aa23.34■■□□□ 1.33
NEK3-208ENST00000618534 RTN1Q16799 776 aa23.34■■□□□ 1.33
NEK3-208ENST00000618534 RRP12Q5JTH9 1297 aaKnown RBP23.34■■□□□ 1.33
NEK3-208ENST00000618534 CMTR1Q8N1G2 835 aaKnown RBP23.34■■□□□ 1.33
NEK3-208ENST00000618534 CARD10Q9BWT7 1032 aa23.34■■□□□ 1.33
NEK3-208ENST00000618534 NID2Q14112 1375 aa23.34■■□□□ 1.33
NEK3-208ENST00000618534 GOLGA6L9A6NEM1 432 aa23.33■■□□□ 1.33
NEK3-208ENST00000618534 RILPL1Q5EBL4 403 aa23.33■■□□□ 1.33
NEK3-208ENST00000618534 TRIM22Q8IYM9 498 aa23.33■■□□□ 1.33
NEK3-208ENST00000618534 SEC31BQ9NQW1 1179 aa23.33■■□□□ 1.33
NEK3-208ENST00000618534 SAMSN1Q9NSI8 373 aaKnown RBP23.33■■□□□ 1.33
NEK3-208ENST00000618534 DACH1Q9UI36 760 aa23.33■■□□□ 1.33
NEK3-208ENST00000618534 TIAM2Q8IVF5 1701 aa23.33■■□□□ 1.33
NEK3-208ENST00000618534 STARD3NLO95772 234 aa23.33■■□□□ 1.33
NEK3-208ENST00000618534 MAP3K9P80192 1104 aa23.33■■□□□ 1.33
NEK3-208ENST00000618534 SPATA5Q8NB90 893 aa23.33■■□□□ 1.33
NEK3-208ENST00000618534 TEX13AQ9BXU3 409 aaPredicted RBP23.33■■□□□ 1.33
NEK3-208ENST00000618534 FOXP1Q9H334 677 aaPredicted RBP23.33■■□□□ 1.33
NEK3-208ENST00000618534 CNNM2Q9H8M5 875 aa23.33■■□□□ 1.33
NEK3-208ENST00000618534 TRMT112Q9UI30 125 aaKnown RBP23.33■■□□□ 1.33
NEK3-208ENST00000618534 PRKAB2O43741 272 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 PUM3Q15397 648 aaKnown RBP23.32■■□□□ 1.32
NEK3-208ENST00000618534 MFSD6Q6ZSS7 791 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 USP49Q70CQ1 688 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 PIGBQ92521 554 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 DESI2Q9BSY9 194 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 KRT23Q9C075 422 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 STRN4Q9NRL3 753 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 TOMM22Q9NS69 142 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 RAI14Q9P0K7 980 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 GSG1L2A8MUP6 293 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 ACTN4O43707 911 aaKnown RBP23.32■■□□□ 1.32
NEK3-208ENST00000618534 TPM1P09493 284 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 ATP2B1P20020 1258 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 LPIN2Q92539 896 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 KIFC2Q96AC6 838 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 MRFAP1Q9Y605 127 aa23.32■■□□□ 1.32
NEK3-208ENST00000618534 FAM193AP78312 1265 aa23.31■■□□□ 1.32
NEK3-208ENST00000618534 PPP2R3AQ06190 1150 aa23.31■■□□□ 1.32
NEK3-208ENST00000618534 NUTM2AQ8IVF1 878 aaPredicted RBP23.31■■□□□ 1.32
NEK3-208ENST00000618534 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.31■■□□□ 1.32
NEK3-208ENST00000618534 FGFR2P21802 821 aa23.31■■□□□ 1.32
NEK3-208ENST00000618534 RASGRF1Q13972 1273 aa23.31■■□□□ 1.32
NEK3-208ENST00000618534 WTAPQ15007 396 aa23.31■■□□□ 1.32
NEK3-208ENST00000618534 OXER1Q8TDS5 423 aa23.31■■□□□ 1.32
NEK3-208ENST00000618534 SNAP23O00161 211 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms