RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PCP11498 1178 aaKnown RBP15.8■□□□□ 0.12
CIITA-213ENST00000618327 ADD1P35611 737 aaKnown RBP15.8■□□□□ 0.12
CIITA-213ENST00000618327 DYNLL1P63167 89 aaKnown RBP15.8■□□□□ 0.12
CIITA-213ENST00000618327 TXNRD1Q16881 649 aa15.8■□□□□ 0.12
CIITA-213ENST00000618327 TRMT1LQ7Z2T5 733 aaKnown RBP15.8■□□□□ 0.12
CIITA-213ENST00000618327 LEO1Q8WVC0 666 aaPredicted RBP15.8■□□□□ 0.12
CIITA-213ENST00000618327 CELF1Q92879 486 aaKnown RBP15.8■□□□□ 0.12
CIITA-213ENST00000618327 CARMIL3Q8ND23 1372 aa15.8■□□□□ 0.12
CIITA-213ENST00000618327 LCORLQ8N3X6 602 aa15.8■□□□□ 0.12
CIITA-213ENST00000618327 LZTS2Q9BRK4 669 aa15.8■□□□□ 0.12
CIITA-213ENST00000618327 NPR1P16066 1061 aa15.8■□□□□ 0.12
CIITA-213ENST00000618327 PDIA3P30101 505 aaKnown RBP15.8■□□□□ 0.12
CIITA-213ENST00000618327 FAM160A1Q05DH4 1040 aa15.8■□□□□ 0.12
CIITA-213ENST00000618327 EXOC1Q9NV70 894 aa15.8■□□□□ 0.12
CIITA-213ENST00000618327 SLC1A4P43007 532 aa15.8■□□□□ 0.12
CIITA-213ENST00000618327 FAM177A1Q8N128 213 aaPredicted RBP15.8■□□□□ 0.12
CIITA-213ENST00000618327 FANCBQ8NB91 859 aa15.8■□□□□ 0.12
CIITA-213ENST00000618327 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
CIITA-213ENST00000618327 PRKAB2O43741 272 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 XRCC6P12956 609 aaKnown RBP eCLIP15.79■□□□□ 0.12
CIITA-213ENST00000618327 RC3H1Q5TC82 1133 aaKnown RBP15.79■□□□□ 0.12
CIITA-213ENST00000618327 PIK3AP1Q6ZUJ8 805 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 ZNF397Q8NF99 534 aaPredicted RBP15.79■□□□□ 0.12
CIITA-213ENST00000618327 hCG_1642624A0A1W2PR95 340 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 RRAGBQ5VZM2 374 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 ZNF34Q8IZ26 560 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 KCNJ14Q9UNX9 436 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 LETM2Q2VYF4 491 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 KRT79Q5XKE5 535 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 ZMYM6O95789 1325 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 MATR3P43243 847 aaKnown RBP eCLIP15.79■□□□□ 0.12
CIITA-213ENST00000618327 PKP1Q13835 747 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 ATG9AQ7Z3C6 839 aa15.79■□□□□ 0.12
CIITA-213ENST00000618327 VWA3AA6NCI4 1184 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 ITPK1Q13572 414 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 TXLNBQ8N3L3 684 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 PDCL3Q9H2J4 239 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 MTMR6Q9Y217 621 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 CAMTA2O94983 1202 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 MTIF2P46199 727 aaKnown RBP15.78■□□□□ 0.12
CIITA-213ENST00000618327 CYP2E1P05181 493 aaPredicted RBP15.78■□□□□ 0.12
CIITA-213ENST00000618327 SCRN1Q12765 414 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 LMBRD1Q9NUN5 540 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 KIF13AQ9H1H9 1805 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 PXDNQ92626 1479 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 ELP1O95163 1332 aa15.78■□□□□ 0.12
CIITA-213ENST00000618327 ODF2Q5BJF6 829 aa15.77■□□□□ 0.12
CIITA-213ENST00000618327 SMIM5Q71RC9 77 aa15.77■□□□□ 0.12
CIITA-213ENST00000618327 TMC6Q7Z403 805 aa15.77■□□□□ 0.12
CIITA-213ENST00000618327 IQUBQ8NA54 791 aa15.77■□□□□ 0.12
CIITA-213ENST00000618327 NFIXQ14938 502 aa15.77■□□□□ 0.12
CIITA-213ENST00000618327 PNMA1Q8ND90 353 aa15.77■□□□□ 0.12
CIITA-213ENST00000618327 VPS54Q9P1Q0 977 aa15.77■□□□□ 0.12
CIITA-213ENST00000618327 PPP4R3AQ6IN85 833 aa15.77■□□□□ 0.11
CIITA-213ENST00000618327 CMTR1Q8N1G2 835 aaKnown RBP15.77■□□□□ 0.11
CIITA-213ENST00000618327 LINC00116Q8NCU8 138 aa15.77■□□□□ 0.11
CIITA-213ENST00000618327 DBNDD1Q9H9R9 158 aa15.77■□□□□ 0.11
CIITA-213ENST00000618327 RIPOR2Q9Y4F9 1068 aa15.77■□□□□ 0.11
CIITA-213ENST00000618327 GSDMDP57764 484 aa15.77■□□□□ 0.11
CIITA-213ENST00000618327 AOPEPQ8N6M6 819 aa15.77■□□□□ 0.11
CIITA-213ENST00000618327 TRIM47Q96LD4 638 aa15.77■□□□□ 0.11
CIITA-213ENST00000618327 TBCAO75347 108 aaKnown RBP15.76■□□□□ 0.11
CIITA-213ENST00000618327 ASIC1P78348 528 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 MASTLQ96GX5 879 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 KDM6AO15550 1401 aaPredicted RBP15.76■□□□□ 0.11
CIITA-213ENST00000618327 MECOMQ03112 1051 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 CUL4AQ13619 759 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 SLFNL1Q499Z3 407 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 ZFYVE27Q5T4F4 411 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 UTYO14607 1347 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 GADD45BO75293 160 aaPredicted RBP15.76■□□□□ 0.11
CIITA-213ENST00000618327 SKIDA1Q1XH10 827 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 CPLX3Q8WVH0 158 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 ARID4AP29374 1257 aaPredicted RBP15.76■□□□□ 0.11
CIITA-213ENST00000618327 ZYXQ15942 572 aaKnown RBP15.76■□□□□ 0.11
CIITA-213ENST00000618327 TTC38Q5R3I4 469 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 FAM114A1Q8IWE2 563 aa15.76■□□□□ 0.11
CIITA-213ENST00000618327 GPR101Q96P66 508 aaPredicted RBP15.76■□□□□ 0.11
CIITA-213ENST00000618327 STRBPQ96SI9 672 aaKnown RBP15.76■□□□□ 0.11
CIITA-213ENST00000618327 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.75■□□□□ 0.11
CIITA-213ENST00000618327 NEMFO60524 1076 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 PLS1Q14651 629 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 ARHGAP29Q52LW3 1261 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 STXBP4Q6ZWJ1 553 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 CACNA2D4Q7Z3S7 1137 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 PICK1Q9NRD5 415 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 ADGRB2O60241 1585 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 CSF1RP07333 972 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 DIXDC1Q155Q3 683 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 CCDC40Q4G0X9 1142 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 MYSM1Q5VVJ2 828 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 APOA5Q6Q788 366 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 GLT8D2Q9H1C3 349 aa15.75■□□□□ 0.11
CIITA-213ENST00000618327 COL5A2P05997 1499 aaPredicted RBP15.75■□□□□ 0.11
CIITA-213ENST00000618327 MPHOSPH6Q99547 160 aaKnown RBP15.75■□□□□ 0.11
CIITA-213ENST00000618327 NUP88Q99567 741 aaPredicted RBP15.75■□□□□ 0.11
CIITA-213ENST00000618327 NAP1L4Q99733 375 aaKnown RBP15.75■□□□□ 0.11
CIITA-213ENST00000618327 JAKMIP3Q5VZ66 844 aa15.74■□□□□ 0.11
CIITA-213ENST00000618327 KCNH3Q9ULD8 1083 aa15.74■□□□□ 0.11
CIITA-213ENST00000618327 CUTAO60888 179 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms