RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 AACSQ86V21 672 aa18.09■□□□□ 0.49
UBXN1-218ENST00000616865 DZIP1Q86YF9 867 aaKnown RBP18.09■□□□□ 0.49
UBXN1-218ENST00000616865 NKX2-3Q8TAU0 364 aa18.09■□□□□ 0.49
UBXN1-218ENST00000616865 GPR108Q9NPR9 543 aa18.09■□□□□ 0.49
UBXN1-218ENST00000616865 ZHX2Q9Y6X8 837 aa18.09■□□□□ 0.49
UBXN1-218ENST00000616865 FPGT-TNNI3KV9GXZ4 949 aa18.09■□□□□ 0.49
UBXN1-218ENST00000616865 CCL5P13501 91 aa18.08■□□□□ 0.48
UBXN1-218ENST00000616865 PTPRAP18433 802 aa18.08■□□□□ 0.48
UBXN1-218ENST00000616865 GJA8P48165 433 aa18.08■□□□□ 0.48
UBXN1-218ENST00000616865 MAP3K10Q02779 954 aa18.08■□□□□ 0.48
UBXN1-218ENST00000616865 SH3BP5LQ7L8J4 393 aa18.08■□□□□ 0.48
UBXN1-218ENST00000616865 FASTKD5Q7L8L6 764 aaKnown RBP18.08■□□□□ 0.48
UBXN1-218ENST00000616865 PICK1Q9NRD5 415 aa18.08■□□□□ 0.48
UBXN1-218ENST00000616865 ATAD5Q96QE3 1844 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 A0A1B0GUL7 405 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 GJB1P08034 283 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 TIMM10P62072 90 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 UBXN2AP68543 259 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 ZSCAN29Q8IWY8 852 aaPredicted RBP18.07■□□□□ 0.48
UBXN1-218ENST00000616865 SLAIN1Q8ND83 568 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 LNPKQ9C0E8 428 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 DDX4Q9NQI0 724 aaKnown RBP18.07■□□□□ 0.48
UBXN1-218ENST00000616865 ABCF2Q9UG63 623 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 SLC45A1Q9Y2W3 748 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 AFG3L2Q9Y4W6 797 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 LOC285556D6RIA3 1793 aa18.07■□□□□ 0.48
UBXN1-218ENST00000616865 MROH7-TTC4A0A0A0MT08 1334 aa18.06■□□□□ 0.48
UBXN1-218ENST00000616865 DDTLA6NHG4 134 aaPredicted RBP18.06■□□□□ 0.48
UBXN1-218ENST00000616865 BTDP43251 543 aa18.06■□□□□ 0.48
UBXN1-218ENST00000616865 NUCB1Q02818 461 aa18.06■□□□□ 0.48
UBXN1-218ENST00000616865 GADL1Q6ZQY3 521 aa18.06■□□□□ 0.48
UBXN1-218ENST00000616865 UBE2Q1Q7Z7E8 422 aa18.06■□□□□ 0.48
UBXN1-218ENST00000616865 CHD1LQ86WJ1 897 aa18.06■□□□□ 0.48
UBXN1-218ENST00000616865 SLF2Q8IX21 1173 aa18.06■□□□□ 0.48
UBXN1-218ENST00000616865 FAM163AQ96GL9 167 aaPredicted RBP18.06■□□□□ 0.48
UBXN1-218ENST00000616865 GPATCH3Q96I76 525 aa18.06■□□□□ 0.48
UBXN1-218ENST00000616865 CCDC8Q9H0W5 538 aaPredicted RBP18.06■□□□□ 0.48
UBXN1-218ENST00000616865 RNF208Q9H0X6 261 aa18.06■□□□□ 0.48
UBXN1-218ENST00000616865 SLURP2P0DP57 97 aa18.05■□□□□ 0.48
UBXN1-218ENST00000616865 PICALMQ13492 652 aa18.05■□□□□ 0.48
UBXN1-218ENST00000616865 CHRDL2Q6WN34 429 aa18.05■□□□□ 0.48
UBXN1-218ENST00000616865 BIN2Q9UBW5 565 aaPredicted RBP18.05■□□□□ 0.48
UBXN1-218ENST00000616865 GABRQQ9UN88 632 aa18.05■□□□□ 0.48
UBXN1-218ENST00000616865 CTNND1O60716 968 aaKnown RBP18.04■□□□□ 0.48
UBXN1-218ENST00000616865 SPTY2D1Q68D10 685 aaPredicted RBP18.04■□□□□ 0.48
UBXN1-218ENST00000616865 SMCR8Q8TEV9 937 aaPredicted RBP18.04■□□□□ 0.48
UBXN1-218ENST00000616865 U2AF1L4Q8WU68 220 aaKnown RBP18.04■□□□□ 0.48
UBXN1-218ENST00000616865 DPF3Q92784 378 aa18.04■□□□□ 0.48
UBXN1-218ENST00000616865 EAF2Q96CJ1 260 aaPredicted RBP18.04■□□□□ 0.48
UBXN1-218ENST00000616865 XAGE2Q96GT9 111 aa18.04■□□□□ 0.48
UBXN1-218ENST00000616865 HTATIP2Q9BUP3 242 aa18.04■□□□□ 0.48
UBXN1-218ENST00000616865 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.04■□□□□ 0.48
UBXN1-218ENST00000616865 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.04■□□□□ 0.48
UBXN1-218ENST00000616865 SZT2Q5T011 3432 aa18.03■□□□□ 0.48
UBXN1-218ENST00000616865 COL2A1P02458 1487 aaPredicted RBP18.03■□□□□ 0.48
UBXN1-218ENST00000616865 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
UBXN1-218ENST00000616865 CCDC158Q5M9N0 1113 aa18.03■□□□□ 0.48
UBXN1-218ENST00000616865 DBNDD2Q9BQY9 259 aa18.03■□□□□ 0.48
UBXN1-218ENST00000616865 UNC93B1Q9H1C4 597 aa18.03■□□□□ 0.48
UBXN1-218ENST00000616865 MAST2Q6P0Q8 1798 aa18.03■□□□□ 0.48
UBXN1-218ENST00000616865 GPR75-ASB3A0A0A6YYF3 556 aa18.02■□□□□ 0.48
UBXN1-218ENST00000616865 TNPO2O14787 897 aaKnown RBP18.02■□□□□ 0.48
UBXN1-218ENST00000616865 CEP290O15078 2479 aa18.02■□□□□ 0.48
UBXN1-218ENST00000616865 FLT3LGP49771 235 aa18.02■□□□□ 0.48
UBXN1-218ENST00000616865 RHBDL3P58872 404 aa18.02■□□□□ 0.48
UBXN1-218ENST00000616865 MECOMQ03112 1051 aa18.02■□□□□ 0.48
UBXN1-218ENST00000616865 TTC39AQ5SRH9 613 aa18.02■□□□□ 0.48
UBXN1-218ENST00000616865 ERICH6Q7L0X2 663 aa18.02■□□□□ 0.48
UBXN1-218ENST00000616865 CCDC84Q86UT8 332 aaPredicted RBP18.02■□□□□ 0.48
UBXN1-218ENST00000616865 PXYLP1Q8TE99 480 aa18.02■□□□□ 0.48
UBXN1-218ENST00000616865 ZNF384Q8TF68 577 aa18.02■□□□□ 0.48
UBXN1-218ENST00000616865 AGTPBP1Q9UPW5 1226 aa18.02■□□□□ 0.48
UBXN1-218ENST00000616865 ADCY3O60266 1144 aa18.01■□□□□ 0.47
UBXN1-218ENST00000616865 TBC1D12O60347 775 aa18.01■□□□□ 0.47
UBXN1-218ENST00000616865 NPM3O75607 178 aaKnown RBP18.01■□□□□ 0.47
UBXN1-218ENST00000616865 FARP2O94887 1054 aaPredicted RBP18.01■□□□□ 0.47
UBXN1-218ENST00000616865 INHAP05111 366 aa18.01■□□□□ 0.47
UBXN1-218ENST00000616865 IRF5Q13568 498 aa18.01■□□□□ 0.47
UBXN1-218ENST00000616865 RBM27Q9P2N5 1060 aaKnown RBP18.01■□□□□ 0.47
UBXN1-218ENST00000616865 SIPA1L1O43166 1804 aa18■□□□□ 0.47
UBXN1-218ENST00000616865 RANBP2P49792 3224 aaKnown RBP18■□□□□ 0.47
UBXN1-218ENST00000616865 SGPL1O95470 568 aa18■□□□□ 0.47
UBXN1-218ENST00000616865 UQCRFS1P1P0C7P4 283 aa18■□□□□ 0.47
UBXN1-218ENST00000616865 ELNP15502 786 aa18■□□□□ 0.47
UBXN1-218ENST00000616865 TREML2Q5T2D2 321 aa18■□□□□ 0.47
UBXN1-218ENST00000616865 TLR7Q9NYK1 1049 aaKnown RBP18■□□□□ 0.47
UBXN1-218ENST00000616865 DBNLQ9UJU6 430 aaKnown RBP18■□□□□ 0.47
UBXN1-218ENST00000616865 TRIOBPQ9H2D6 2365 aa17.99■□□□□ 0.47
UBXN1-218ENST00000616865 FAM196BA6NMK8 535 aa17.99■□□□□ 0.47
UBXN1-218ENST00000616865 FAM110CQ1W6H9 321 aa17.99■□□□□ 0.47
UBXN1-218ENST00000616865 PI16Q6UXB8 463 aa17.99■□□□□ 0.47
UBXN1-218ENST00000616865 ANKRD13CQ8N6S4 541 aa17.99■□□□□ 0.47
UBXN1-218ENST00000616865 PROCA1Q8NCQ7 364 aaPredicted RBP17.99■□□□□ 0.47
UBXN1-218ENST00000616865 NSUN4Q96CB9 384 aaKnown RBP17.99■□□□□ 0.47
UBXN1-218ENST00000616865 OSBPL5Q9H0X9 879 aaPredicted RBP17.99■□□□□ 0.47
UBXN1-218ENST00000616865 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.99■□□□□ 0.47
UBXN1-218ENST00000616865 HMG20BQ9P0W2 317 aa17.99■□□□□ 0.47
UBXN1-218ENST00000616865 PNMA3Q9UL41 463 aa17.99■□□□□ 0.47
UBXN1-218ENST00000616865 ALPK3Q96L96 1907 aa17.98■□□□□ 0.47
UBXN1-218ENST00000616865 DOCK3Q8IZD9 2030 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms