RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 ZHX2Q9Y6X8 837 aa26.86■■□□□ 1.89
CBWD3-212ENST00000616550 ZNF532Q9HCE3 1301 aa26.86■■□□□ 1.89
CBWD3-212ENST00000616550 PTPRAP18433 802 aa26.85■■□□□ 1.89
CBWD3-212ENST00000616550 FOXP4Q8IVH2 680 aaPredicted RBP26.85■■□□□ 1.89
CBWD3-212ENST00000616550 FAM43AQ8N2R8 423 aa26.85■■□□□ 1.89
CBWD3-212ENST00000616550 TRIM34Q9BYJ4 488 aa26.85■■□□□ 1.89
CBWD3-212ENST00000616550 PALD1Q9ULE6 856 aa26.85■■□□□ 1.89
CBWD3-212ENST00000616550 KCNH4Q9UQ05 1017 aa26.85■■□□□ 1.89
CBWD3-212ENST00000616550 CXCL11O14625 94 aa26.84■■□□□ 1.89
CBWD3-212ENST00000616550 HLA-DOAP06340 250 aa26.84■■□□□ 1.89
CBWD3-212ENST00000616550 TAF1CQ15572 869 aaPredicted RBP26.84■■□□□ 1.89
CBWD3-212ENST00000616550 ZFYVE28Q9HCC9 887 aa26.84■■□□□ 1.89
CBWD3-212ENST00000616550 ZBTB47Q9UFB7 747 aaPredicted RBP26.84■■□□□ 1.89
CBWD3-212ENST00000616550 SAP30BPQ9UHR5 308 aaKnown RBP26.84■■□□□ 1.89
CBWD3-212ENST00000616550 DOCK1Q14185 1865 aa26.83■■□□□ 1.89
CBWD3-212ENST00000616550 MYH1P12882 1939 aa26.83■■□□□ 1.89
CBWD3-212ENST00000616550 BTBD19C9JJ37 291 aa26.83■■□□□ 1.89
CBWD3-212ENST00000616550 CRACR2BQ8N4Y2 399 aaPredicted RBP26.83■■□□□ 1.89
CBWD3-212ENST00000616550 RIOK1Q9BRS2 568 aaKnown RBP26.83■■□□□ 1.89
CBWD3-212ENST00000616550 ZCCHC17Q9NP64 241 aaKnown RBP26.83■■□□□ 1.89
CBWD3-212ENST00000616550 TCRBV5S4A2TA0A5A2 114 aa26.82■■□□□ 1.88
CBWD3-212ENST00000616550 ADD2P35612 726 aa26.81■■□□□ 1.88
CBWD3-212ENST00000616550 CRNKL1Q9BZJ0 848 aaKnown RBP26.81■■□□□ 1.88
CBWD3-212ENST00000616550 AFG3L2Q9Y4W6 797 aa26.81■■□□□ 1.88
CBWD3-212ENST00000616550 CAP2P40123 477 aa26.8■■□□□ 1.88
CBWD3-212ENST00000616550 HDAC1Q13547 482 aaPredicted RBP26.8■■□□□ 1.88
CBWD3-212ENST00000616550 ZSCAN25Q6NSZ9 544 aa26.8■■□□□ 1.88
CBWD3-212ENST00000616550 MYH7P12883 1935 aa26.79■■□□□ 1.88
CBWD3-212ENST00000616550 PKN2Q16513 984 aaKnown RBP26.79■■□□□ 1.88
CBWD3-212ENST00000616550 SLC4A8Q2Y0W8 1093 aa26.79■■□□□ 1.88
CBWD3-212ENST00000616550 ANKRD23Q86SG2 305 aa26.79■■□□□ 1.88
CBWD3-212ENST00000616550 METTL16Q86W50 562 aaKnown RBP26.79■■□□□ 1.88
CBWD3-212ENST00000616550 GCC1Q96CN9 775 aa26.79■■□□□ 1.88
CBWD3-212ENST00000616550 SUPT16HQ9Y5B9 1047 aaKnown RBP26.79■■□□□ 1.88
CBWD3-212ENST00000616550 SIPA1L1O43166 1804 aa26.79■■□□□ 1.88
CBWD3-212ENST00000616550 SP3Q02447 781 aa26.78■■□□□ 1.88
CBWD3-212ENST00000616550 UBE3CQ15386 1083 aa26.78■■□□□ 1.88
CBWD3-212ENST00000616550 TSHZ3Q63HK5 1081 aa26.78■■□□□ 1.88
CBWD3-212ENST00000616550 FASTKD5Q7L8L6 764 aaKnown RBP26.78■■□□□ 1.88
CBWD3-212ENST00000616550 TTC6Q86TZ1 520 aa26.78■■□□□ 1.88
CBWD3-212ENST00000616550 ERO1AQ96HE7 468 aa26.78■■□□□ 1.88
CBWD3-212ENST00000616550 ATAD5Q96QE3 1844 aa26.77■■□□□ 1.88
CBWD3-212ENST00000616550 TTC41PQ6P2S7 1318 aa26.77■■□□□ 1.88
CBWD3-212ENST00000616550 PDHXO00330 501 aa26.77■■□□□ 1.88
CBWD3-212ENST00000616550 ANKRD45Q5TZF3 282 aa26.77■■□□□ 1.88
CBWD3-212ENST00000616550 TBC1D2Q9BYX2 928 aa26.77■■□□□ 1.88
CBWD3-212ENST00000616550 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.77■■□□□ 1.88
CBWD3-212ENST00000616550 PHIPQ8WWQ0 1821 aa26.76■■□□□ 1.88
CBWD3-212ENST00000616550 A0A0G2JLL6 359 aaPredicted RBP26.76■■□□□ 1.87
CBWD3-212ENST00000616550 TRIM75PA6NK02 468 aa26.76■■□□□ 1.87
CBWD3-212ENST00000616550 CCDC85CA6NKD9 419 aa26.76■■□□□ 1.87
CBWD3-212ENST00000616550 ERC2O15083 957 aa26.76■■□□□ 1.87
CBWD3-212ENST00000616550 MOGSQ13724 837 aa26.76■■□□□ 1.87
CBWD3-212ENST00000616550 RRP1BQ14684 758 aaKnown RBP26.76■■□□□ 1.87
CBWD3-212ENST00000616550 SLFNL1Q499Z3 407 aa26.76■■□□□ 1.87
CBWD3-212ENST00000616550 PRRT2Q7Z6L0 340 aaPredicted RBP26.76■■□□□ 1.87
CBWD3-212ENST00000616550 LCORLQ8N3X6 602 aa26.76■■□□□ 1.87
CBWD3-212ENST00000616550 DNAJC18Q9H819 358 aa26.76■■□□□ 1.87
CBWD3-212ENST00000616550 ARMT1Q9H993 441 aa26.76■■□□□ 1.87
CBWD3-212ENST00000616550 USP17L5A8MUK1 530 aa26.75■■□□□ 1.87
CBWD3-212ENST00000616550 TLR2O60603 784 aa26.75■■□□□ 1.87
CBWD3-212ENST00000616550 POLR3DP05423 398 aaPredicted RBP26.75■■□□□ 1.87
CBWD3-212ENST00000616550 GADL1Q6ZQY3 521 aa26.75■■□□□ 1.87
CBWD3-212ENST00000616550 CCDC84Q86UT8 332 aaPredicted RBP26.75■■□□□ 1.87
CBWD3-212ENST00000616550 EXOC6Q8TAG9 804 aa26.75■■□□□ 1.87
CBWD3-212ENST00000616550 RWDD1Q9H446 243 aaPredicted RBP26.75■■□□□ 1.87
CBWD3-212ENST00000616550 SERPINB13Q9UIV8 391 aa26.75■■□□□ 1.87
CBWD3-212ENST00000616550 MBD4O95243 580 aa26.74■■□□□ 1.87
CBWD3-212ENST00000616550 ASNSP08243 561 aa26.74■■□□□ 1.87
CBWD3-212ENST00000616550 KBTBD3Q8NAB2 608 aa26.74■■□□□ 1.87
CBWD3-212ENST00000616550 ZNF280CQ8ND82 737 aa26.74■■□□□ 1.87
CBWD3-212ENST00000616550 EHD4Q9H223 541 aa26.74■■□□□ 1.87
CBWD3-212ENST00000616550 AS3MTQ9HBK9 375 aa26.74■■□□□ 1.87
CBWD3-212ENST00000616550 GINM1Q9NU53 330 aa26.74■■□□□ 1.87
CBWD3-212ENST00000616550 MCM9Q9NXL9 1143 aa26.74■■□□□ 1.87
CBWD3-212ENST00000616550 GLRX3O76003 335 aaKnown RBP26.73■■□□□ 1.87
CBWD3-212ENST00000616550 SPP2Q13103 211 aa26.73■■□□□ 1.87
CBWD3-212ENST00000616550 CD99L2Q8TCZ2 262 aa26.73■■□□□ 1.87
CBWD3-212ENST00000616550 OTUD7AQ8TE49 926 aaPredicted RBP26.73■■□□□ 1.87
CBWD3-212ENST00000616550 SDR42E1Q8WUS8 393 aa26.73■■□□□ 1.87
CBWD3-212ENST00000616550 PTPRFP10586 1907 aa26.73■■□□□ 1.87
CBWD3-212ENST00000616550 NAV1Q8NEY1 1877 aa26.72■■□□□ 1.87
CBWD3-212ENST00000616550 MX1P20591 662 aa26.72■■□□□ 1.87
CBWD3-212ENST00000616550 GPAT2Q6NUI2 795 aa26.72■■□□□ 1.87
CBWD3-212ENST00000616550 DCP1AQ9NPI6 582 aaPredicted RBP26.72■■□□□ 1.87
CBWD3-212ENST00000616550 TRIM17Q9Y577 477 aa26.72■■□□□ 1.87
CBWD3-212ENST00000616550 GDF11O95390 407 aa26.71■■□□□ 1.87
CBWD3-212ENST00000616550 CHGBP05060 677 aa26.71■■□□□ 1.87
CBWD3-212ENST00000616550 ARHGEF6Q15052 776 aa26.71■■□□□ 1.87
CBWD3-212ENST00000616550 ATP8A2Q9NTI2 1148 aa26.71■■□□□ 1.87
CBWD3-212ENST00000616550 PLCD1P51178 756 aa26.7■■□□□ 1.86
CBWD3-212ENST00000616550 LRRFIP1Q32MZ4 808 aaKnown RBP26.7■■□□□ 1.86
CBWD3-212ENST00000616550 FBXO46Q6PJ61 603 aaPredicted RBP26.7■■□□□ 1.86
CBWD3-212ENST00000616550 OTOP1Q7RTM1 612 aa26.7■■□□□ 1.86
CBWD3-212ENST00000616550 PI4K2BQ8TCG2 481 aa26.7■■□□□ 1.86
CBWD3-212ENST00000616550 PARK7Q99497 189 aaKnown RBP26.7■■□□□ 1.86
CBWD3-212ENST00000616550 SLC45A1Q9Y2W3 748 aa26.7■■□□□ 1.86
CBWD3-212ENST00000616550 PRKAB2O43741 272 aa26.69■■□□□ 1.86
CBWD3-212ENST00000616550 ZFYP08048 801 aaPredicted RBP26.69■■□□□ 1.86
CBWD3-212ENST00000616550 TATDN1Q6P1N9 297 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms