RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 HNRNPH2P55795 449 aaKnown RBP19.03■□□□□ 0.64
CNOT3-208ENST00000613073 HIBADHP31937 336 aaKnown RBP19.02■□□□□ 0.64
CNOT3-208ENST00000613073 PTPN14Q15678 1187 aa19.02■□□□□ 0.64
CNOT3-208ENST00000613073 FBXO33Q7Z6M2 555 aa19.02■□□□□ 0.64
CNOT3-208ENST00000613073 NOL10Q9BSC4 688 aaKnown RBP19.02■□□□□ 0.64
CNOT3-208ENST00000613073 ZNF446Q9NWS9 450 aa19.02■□□□□ 0.64
CNOT3-208ENST00000613073 A0A1B0GUL6 1792 aa19.02■□□□□ 0.64
CNOT3-208ENST00000613073 CYP2D7A0A087X1C5 515 aa19.02■□□□□ 0.63
CNOT3-208ENST00000613073 UBE2Q2LH0YL09 131 aa19.02■□□□□ 0.63
CNOT3-208ENST00000613073 PPARAQ07869 468 aa19.02■□□□□ 0.63
CNOT3-208ENST00000613073 ZNF396Q96N95 335 aaPredicted RBP19.02■□□□□ 0.63
CNOT3-208ENST00000613073 KRT23Q9C075 422 aa19.02■□□□□ 0.63
CNOT3-208ENST00000613073 CNNM2Q9H8M5 875 aa19.02■□□□□ 0.63
CNOT3-208ENST00000613073 SLC12A7Q9Y666 1083 aa19.02■□□□□ 0.63
CNOT3-208ENST00000613073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.01■□□□□ 0.63
CNOT3-208ENST00000613073 CCDC69A6NI79 296 aa19.01■□□□□ 0.63
CNOT3-208ENST00000613073 GOLGA8AA7E2F4 631 aa19.01■□□□□ 0.63
CNOT3-208ENST00000613073 FILIP1Q7Z7B0 1213 aa19.01■□□□□ 0.63
CNOT3-208ENST00000613073 CERKQ8TCT0 537 aa19.01■□□□□ 0.63
CNOT3-208ENST00000613073 RIOK1Q9BRS2 568 aaKnown RBP19.01■□□□□ 0.63
CNOT3-208ENST00000613073 RCOR1Q9UKL0 485 aa19.01■□□□□ 0.63
CNOT3-208ENST00000613073 TRPC5Q9UL62 973 aaPredicted RBP19.01■□□□□ 0.63
CNOT3-208ENST00000613073 ME1P48163 572 aa19.01■□□□□ 0.63
CNOT3-208ENST00000613073 PLA2G4DQ86XP0 818 aa19.01■□□□□ 0.63
CNOT3-208ENST00000613073 STAG1Q8WVM7 1258 aa19.01■□□□□ 0.63
CNOT3-208ENST00000613073 ZNF165P49910 485 aa19■□□□□ 0.63
CNOT3-208ENST00000613073 ZFP91Q96JP5 570 aaPredicted RBP19■□□□□ 0.63
CNOT3-208ENST00000613073 ALG1Q9BT22 464 aa19■□□□□ 0.63
CNOT3-208ENST00000613073 ANKRD2Q9GZV1 360 aa19■□□□□ 0.63
CNOT3-208ENST00000613073 ANKIB1Q9P2G1 1089 aa19■□□□□ 0.63
CNOT3-208ENST00000613073 TAF1LQ8IZX4 1826 aa19■□□□□ 0.63
CNOT3-208ENST00000613073 CHD4Q14839 1912 aa19■□□□□ 0.63
CNOT3-208ENST00000613073 KIF28PB7ZC32 967 aa19■□□□□ 0.63
CNOT3-208ENST00000613073 PRDX5P30044 214 aa19■□□□□ 0.63
CNOT3-208ENST00000613073 CCAR1Q8IX12 1150 aaKnown RBP19■□□□□ 0.63
CNOT3-208ENST00000613073 CCDC82Q8N4S0 544 aa19■□□□□ 0.63
CNOT3-208ENST00000613073 CNBD1Q8NA66 436 aa19■□□□□ 0.63
CNOT3-208ENST00000613073 PAXIP1Q6ZW49 1069 aaPredicted RBP18.99■□□□□ 0.63
CNOT3-208ENST00000613073 SGMS1Q86VZ5 419 aa18.99■□□□□ 0.63
CNOT3-208ENST00000613073 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
CNOT3-208ENST00000613073 FAM217BQ9NTX9 383 aaPredicted RBP18.99■□□□□ 0.63
CNOT3-208ENST00000613073 DDX19AQ9NUU7 478 aaKnown RBP18.99■□□□□ 0.63
CNOT3-208ENST00000613073 C4BP0C0L5 1744 aa18.99■□□□□ 0.63
CNOT3-208ENST00000613073 SBF2Q86WG5 1849 aa18.99■□□□□ 0.63
CNOT3-208ENST00000613073 MECOMQ03112 1051 aa18.99■□□□□ 0.63
CNOT3-208ENST00000613073 CLIC4Q9Y696 253 aa18.99■□□□□ 0.63
CNOT3-208ENST00000613073 GOLGB1Q14789 3259 aaKnown RBP18.99■□□□□ 0.63
CNOT3-208ENST00000613073 MYH15Q9Y2K3 1946 aa18.99■□□□□ 0.63
CNOT3-208ENST00000613073 A0A087WWV3 80 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 ONECUT3O60422 494 aaPredicted RBP18.98■□□□□ 0.63
CNOT3-208ENST00000613073 RANBP6O60518 1105 aaKnown RBP18.98■□□□□ 0.63
CNOT3-208ENST00000613073 LIFRP42702 1097 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 ERCC6LQ2NKX8 1250 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 CPLX2Q6PUV4 134 aaKnown RBP18.98■□□□□ 0.63
CNOT3-208ENST00000613073 LRRN4CLQ8ND94 238 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 GOLPH3LQ9H4A5 285 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 CLSTN2Q9H4D0 955 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 AATFQ9NY61 560 aaKnown RBP eCLIP18.98■□□□□ 0.63
CNOT3-208ENST00000613073 COL24A1Q17RW2 1714 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 POLR3GO15318 223 aaPredicted RBP18.98■□□□□ 0.63
CNOT3-208ENST00000613073 LY75O60449 1722 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 PRDM1O75626 825 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 C4AP0C0L4 1744 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 SKILP12757 684 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 IARSP41252 1262 aaKnown RBP18.98■□□□□ 0.63
CNOT3-208ENST00000613073 WTAPQ15007 396 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 CMTR1Q8N1G2 835 aaKnown RBP18.98■□□□□ 0.63
CNOT3-208ENST00000613073 NEK11Q8NG66 645 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 NSUN4Q96CB9 384 aaKnown RBP18.98■□□□□ 0.63
CNOT3-208ENST00000613073 GPR101Q96P66 508 aaPredicted RBP18.98■□□□□ 0.63
CNOT3-208ENST00000613073 CACNA1SQ13698 1873 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 TULP2O00295 520 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 CDKL5O76039 1030 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 EVX2Q03828 476 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 NTRK3Q16288 839 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 SYNE3Q6ZMZ3 975 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 LRRC8AQ8IWT6 810 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 SLC26A6Q9BXS9 759 aa18.98■□□□□ 0.63
CNOT3-208ENST00000613073 ERICH2A1L162 156 aa18.97■□□□□ 0.63
CNOT3-208ENST00000613073 SART3Q15020 963 aaKnown RBP18.97■□□□□ 0.63
CNOT3-208ENST00000613073 KIF23Q02241 960 aaPredicted RBP18.97■□□□□ 0.63
CNOT3-208ENST00000613073 NUP133Q8WUM0 1156 aa18.97■□□□□ 0.63
CNOT3-208ENST00000613073 ERO1AQ96HE7 468 aa18.97■□□□□ 0.63
CNOT3-208ENST00000613073 RNF41Q9H4P4 317 aaPredicted RBP18.97■□□□□ 0.63
CNOT3-208ENST00000613073 TNRC6CQ9HCJ0 1690 aaKnown RBP18.97■□□□□ 0.63
CNOT3-208ENST00000613073 BAZ2AQ9UIF9 1905 aaKnown RBP18.97■□□□□ 0.63
CNOT3-208ENST00000613073 TRIM37O94972 964 aa18.96■□□□□ 0.63
CNOT3-208ENST00000613073 MYSM1Q5VVJ2 828 aa18.96■□□□□ 0.63
CNOT3-208ENST00000613073 FBXW7Q969H0 707 aa18.96■□□□□ 0.63
CNOT3-208ENST00000613073 PCDHA7Q9UN72 937 aa18.96■□□□□ 0.63
CNOT3-208ENST00000613073 STK38Q15208 465 aa18.96■□□□□ 0.63
CNOT3-208ENST00000613073 SF3A1Q15459 793 aaKnown RBP18.96■□□□□ 0.63
CNOT3-208ENST00000613073 SLC4A8Q2Y0W8 1093 aa18.96■□□□□ 0.63
CNOT3-208ENST00000613073 KRT40Q6A162 431 aa18.96■□□□□ 0.63
CNOT3-208ENST00000613073 ATL3Q6DD88 541 aa18.96■□□□□ 0.63
CNOT3-208ENST00000613073 UBAC1Q9BSL1 405 aa18.96■□□□□ 0.63
CNOT3-208ENST00000613073 SEMA3EO15041 775 aa18.95■□□□□ 0.62
CNOT3-208ENST00000613073 SLU7O95391 586 aaKnown RBP18.95■□□□□ 0.62
CNOT3-208ENST00000613073 RAD51AP2Q09MP3 1159 aa18.95■□□□□ 0.62
CNOT3-208ENST00000613073 PRR5LQ6MZQ0 368 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms