RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
PCDHGA3-202ENST00000612467 ATP1A3P13637 1013 aa16.28■□□□□ 0.2
PCDHGA3-202ENST00000612467 LMOD1P29536 600 aaPredicted RBP16.28■□□□□ 0.2
PCDHGA3-202ENST00000612467 BCORQ6W2J9 1755 aa16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 RIOK3O14730 519 aaKnown RBP16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 CYP2D6P10635 497 aa16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 FOXP4Q8IVH2 680 aaPredicted RBP16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 GRAMD1CQ8IYS0 662 aa16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 GPR101Q96P66 508 aaPredicted RBP16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 CNNM2Q9H8M5 875 aa16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 AATFQ9NY61 560 aaKnown RBP eCLIP16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 PCDHB6Q9Y5E3 794 aa16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 ZNF804BA4D1E1 1349 aa16.27■□□□□ 0.2
PCDHGA3-202ENST00000612467 SMC2O95347 1197 aa16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 PLEKHA8P1O95397 391 aa16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 IFNAR1P17181 557 aa16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 PRDX5P30044 214 aa16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 ZRSR1Q15695 479 aaKnown RBP16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 EARS2Q5JPH6 523 aaKnown RBP16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 USP49Q70CQ1 688 aa16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 LRRC8AQ8IWT6 810 aa16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 UBAC1Q9BSL1 405 aa16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 IFNKQ9P0W0 207 aa16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 VPS54Q9P1Q0 977 aa16.27■□□□□ 0.19
PCDHGA3-202ENST00000612467 GNPATO15228 680 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 RRP9O43818 475 aaKnown RBP16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 SARM1Q6SZW1 724 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 PDILTQ8N807 584 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 FANCBQ8NB91 859 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 NGLY1Q96IV0 654 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 XPO4Q9C0E2 1151 aaKnown RBP16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 TRMT1Q9NXH9 659 aaKnown RBP16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 ERICH2A1L162 156 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 WNT7AO00755 349 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 MMP1P03956 469 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 METTL16Q86W50 562 aaKnown RBP16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 NOSTRINQ8IVI9 506 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 CRACR2BQ8N4Y2 399 aaPredicted RBP16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 ENAHQ8N8S7 591 aaPredicted RBP16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 BSDC1Q9NW68 430 aaPredicted RBP16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 CACNA1SQ13698 1873 aa16.26■□□□□ 0.19
PCDHGA3-202ENST00000612467 USP17L12C9JPN9 530 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 USP17L21D6R901 530 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 TPM3P06753 285 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 NCAPHQ15003 741 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 ZNF710Q8N1W2 664 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 HPSEQ9Y251 543 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 CASZ1Q86V15 1759 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 RTL9Q8NET4 1388 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 MYH13Q9UKX3 1938 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 GNAT2P19087 354 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 SF3B3Q15393 1217 aaKnown RBP16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 ZNF827Q17R98 1081 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 CAVIN4Q5BKX8 364 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 BARGINQ6ZT62 677 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 MRFAP1L1Q96HT8 127 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 VEGFAP15692 232 aaPredicted RBP16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 NLRP12P59046 1061 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 MECOMQ03112 1051 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 GOLGA8FQ08AF8 430 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 GOLGA8DPQ0D2H9 430 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 SART3Q15020 963 aaKnown RBP16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 SEC23AQ15436 765 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 NBPF5PQ86XG9 351 aaPredicted RBP16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 ZNF592Q92610 1267 aa16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 SMARCC1Q92922 1105 aaPredicted RBP16.25■□□□□ 0.19
PCDHGA3-202ENST00000612467 RREB1Q92766 1687 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 TIAM2Q8IVF5 1701 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 DYNC1I1O14576 645 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 ADAMTS3O15072 1205 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 CAVIN2O95810 425 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 PRR29P0C7W0 189 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 RESP18Q5W5W9 173 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 DPF2Q92785 391 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 HSD3B7Q9H2F3 369 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 COL5A3P25940 1745 aaPredicted RBP16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 SKILP12757 684 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 PDE4BQ07343 736 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 CTR9Q6PD62 1173 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 TMC6Q7Z403 805 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 TRIM22Q8IYM9 498 aa16.24■□□□□ 0.19
PCDHGA3-202ENST00000612467 BMP6P22004 513 aa16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 UBE4AQ14139 1066 aa16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 NAA30Q147X3 362 aaPredicted RBP16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 TPD52L1Q16890 204 aaPredicted RBP16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 CLEC4GQ6UXB4 293 aa16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 NAT10Q9H0A0 1025 aaKnown RBP16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 GNL3LQ9NVN8 582 aaKnown RBP16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 KCNH3Q9ULD8 1083 aa16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 PPP6R2O75170 966 aa16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 CDC25BP30305 580 aa16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 CCZ1BP86790 482 aa16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 CCZ1P86791 482 aaPredicted RBP16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
PCDHGA3-202ENST00000612467 NSUN4Q96CB9 384 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms