RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 ORC3Q9UBD5 711 aaPredicted RBP12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 RCOR1Q9UKL0 485 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 SNAP23O00161 211 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 FOXP2O15409 715 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 PRC1O43663 620 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 TCIRG1Q13488 830 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 SLC16A10Q8TF71 515 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 XAGE2Q96GT9 111 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 C8orf76Q96K31 380 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 ATG3Q9NT62 314 aa12.3□□□□□ -0.44
PCDHGC3-202ENST00000611950 PNPLA7Q6ZV29 1317 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 KIF28PB7ZC32 967 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 FAM160A1Q05DH4 1040 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 GOLGA8FQ08AF8 430 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 GOLGA8DPQ0D2H9 430 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 MAP9Q49MG5 647 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 SLC27A3Q5K4L6 730 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 CCDC82Q8N4S0 544 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 CCDC112Q8NEF3 446 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 PHKBQ93100 1093 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 AGXT2Q9BYV1 514 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 ASAP1Q9ULH1 1129 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 PAXBP1Q9Y5B6 917 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 ANKRD33BA6NCL7 494 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 CEP135Q66GS9 1140 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 NLGN2Q8NFZ4 835 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 HELBQ8NG08 1087 aaPredicted RBP12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 SENP2Q9HC62 589 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 IDH1O75874 414 aaKnown RBP12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 LMOD1P29536 600 aaPredicted RBP12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 ZRSR2Q15696 482 aaKnown RBP12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 SPECC1Q5M775 1068 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 MRPS27Q92552 414 aaKnown RBP12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 NUB1Q9Y5A7 615 aa12.29□□□□□ -0.44
PCDHGC3-202ENST00000611950 H0YHG0 523 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 GYS2P54840 703 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 SARNPP82979 210 aaKnown RBP12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 NAA16Q6N069 864 aaPredicted RBP12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 TMC6Q7Z403 805 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 RALYLQ86SE5 291 aaKnown RBP12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 MICU3Q86XE3 530 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 CEP57L1Q8IYX8 460 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 LLPHQ9BRT6 129 aaKnown RBP12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 TMOD3Q9NYL9 352 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 IFNKQ9P0W0 207 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 CCDC158Q5M9N0 1113 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 CCDC91Q7Z6B0 441 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 RPAINQ86UA6 219 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 ENGASEQ8NFI3 743 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 DOT1LQ8TEK3 1739 aa12.28□□□□□ -0.44
PCDHGC3-202ENST00000611950 SALL1Q9NSC2 1324 aa12.27□□□□□ -0.44
PCDHGC3-202ENST00000611950 SPEF2Q9C093 1822 aa12.27□□□□□ -0.44
PCDHGC3-202ENST00000611950 CASQ1P31415 396 aa12.27□□□□□ -0.44
PCDHGC3-202ENST00000611950 IMMTQ16891 758 aaKnown RBP12.27□□□□□ -0.44
PCDHGC3-202ENST00000611950 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.27□□□□□ -0.44
PCDHGC3-202ENST00000611950 PIGBQ92521 554 aa12.27□□□□□ -0.44
PCDHGC3-202ENST00000611950 ANO10Q9NW15 660 aa12.27□□□□□ -0.44
PCDHGC3-202ENST00000611950 ZNF215Q9UL58 517 aaPredicted RBP12.27□□□□□ -0.44
PCDHGC3-202ENST00000611950 JRKLQ9Y4A0 524 aa12.27□□□□□ -0.44
PCDHGC3-202ENST00000611950 GPAA1O43292 621 aa12.27□□□□□ -0.45
PCDHGC3-202ENST00000611950 GNL2Q13823 731 aaKnown RBP12.27□□□□□ -0.45
PCDHGC3-202ENST00000611950 XPO4Q9C0E2 1151 aaKnown RBP12.27□□□□□ -0.45
PCDHGC3-202ENST00000611950 QSER1Q2KHR3 1735 aa12.27□□□□□ -0.45
PCDHGC3-202ENST00000611950 RIC1Q4ADV7 1423 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 PCCAP05165 728 aaPredicted RBP12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 ATP1A3P13637 1013 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 ATP2B1P20020 1258 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 ANTXR2P58335 489 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 TRDNQ13061 729 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 TRIM28Q13263 835 aaKnown RBP12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 PTPN14Q15678 1187 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 SYNE3Q6ZMZ3 975 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 CLIC6Q96NY7 704 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 ERICH4A6NGS2 130 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 SPTLC2O15270 562 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 HNRNPH2P55795 449 aaKnown RBP12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 HLFQ16534 295 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 FMR1NBQ8N0W7 255 aaPredicted RBP12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 CMTR1Q8N1G2 835 aaKnown RBP12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 LINC00301Q8NCQ3 95 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 DRC1Q96MC2 740 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 CCNL1Q9UK58 526 aaPredicted RBP12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 MROH7-TTC4A0A0A0MT08 1334 aa12.26□□□□□ -0.45
PCDHGC3-202ENST00000611950 SMTNL1A8MU46 457 aa12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 B4E1Z4 1266 aa12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 ZNF213O14771 459 aa12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 CSF1RP07333 972 aa12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 FAM163BP0C2L3 166 aa12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 METTL24Q5JXM2 366 aa12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 SUDS3Q9H7L9 328 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 HPS5Q9UPZ3 1129 aa12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 CCZ1BP86790 482 aa12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 CCZ1P86791 482 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 SLC9C2Q5TAH2 1124 aa12.25□□□□□ -0.45
PCDHGC3-202ENST00000611950 MYSM1Q5VVJ2 828 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms