RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 LAMB1P07942 1786 aa31.43■■■□□ 2.62
VEGFA-226ENST00000611736 CRNKL1Q9BZJ0 848 aaKnown RBP31.43■■■□□ 2.62
VEGFA-226ENST00000611736 ARMT1Q9H993 441 aa31.43■■■□□ 2.62
VEGFA-226ENST00000611736 MBD4O95243 580 aa31.42■■■□□ 2.62
VEGFA-226ENST00000611736 INHBEP58166 350 aa31.41■■■□□ 2.62
VEGFA-226ENST00000611736 PPIL2Q13356 520 aa31.41■■■□□ 2.62
VEGFA-226ENST00000611736 IFNL1Q8IU54 200 aa31.41■■■□□ 2.62
VEGFA-226ENST00000611736 SCYL3Q8IZE3 742 aa31.41■■■□□ 2.62
VEGFA-226ENST00000611736 MS4A4AQ96JQ5 239 aa31.41■■■□□ 2.62
VEGFA-226ENST00000611736 PICK1Q9NRD5 415 aa31.41■■■□□ 2.62
VEGFA-226ENST00000611736 NAV1Q8NEY1 1877 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 CASP8AP2Q9UKL3 1982 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 IRF6O14896 467 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 HLA-DOAP06340 250 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 GTF2A2P52657 109 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 PDE1AP54750 535 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 NUCB1Q02818 461 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 PPATQ06203 517 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 CHD1LQ86WJ1 897 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 STAP2Q9UGK3 403 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 HERC5Q9UII4 1024 aaKnown RBP31.4■■■□□ 2.62
VEGFA-226ENST00000611736 DOCK1Q14185 1865 aa31.4■■■□□ 2.62
VEGFA-226ENST00000611736 IGF2BP3O00425 579 aaKnown RBP eCLIP31.39■■■□□ 2.62
VEGFA-226ENST00000611736 CTNND1O60716 968 aaKnown RBP31.39■■■□□ 2.62
VEGFA-226ENST00000611736 CRACR2BQ8N4Y2 399 aaPredicted RBP31.39■■■□□ 2.62
VEGFA-226ENST00000611736 SDR42E1Q8WUS8 393 aa31.39■■■□□ 2.62
VEGFA-226ENST00000611736 TRIM34Q9BYJ4 488 aa31.39■■■□□ 2.62
VEGFA-226ENST00000611736 CCL15-CCL14A0A0B4J2E2 113 aa31.38■■■□□ 2.61
VEGFA-226ENST00000611736 TBC1D8O95759 1140 aa31.38■■■□□ 2.61
VEGFA-226ENST00000611736 CCL15Q16663 113 aa31.38■■■□□ 2.61
VEGFA-226ENST00000611736 BRI3BPQ8WY22 251 aa31.38■■■□□ 2.61
VEGFA-226ENST00000611736 FOXP4Q8IVH2 680 aaPredicted RBP31.37■■■□□ 2.61
VEGFA-226ENST00000611736 PTPN18Q99952 460 aa31.37■■■□□ 2.61
VEGFA-226ENST00000611736 FSD1Q9BTV5 496 aa31.37■■■□□ 2.61
VEGFA-226ENST00000611736 PUS7LQ9H0K6 701 aaKnown RBP31.37■■■□□ 2.61
VEGFA-226ENST00000611736 TESPA1A2RU30 521 aaPredicted RBP31.36■■■□□ 2.61
VEGFA-226ENST00000611736 RNF113AO15541 343 aaKnown RBP31.36■■■□□ 2.61
VEGFA-226ENST00000611736 PRKAB2O43741 272 aa31.36■■■□□ 2.61
VEGFA-226ENST00000611736 SNAPC2Q13487 334 aa31.36■■■□□ 2.61
VEGFA-226ENST00000611736 DNAJC18Q9H819 358 aa31.36■■■□□ 2.61
VEGFA-226ENST00000611736 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.36■■■□□ 2.61
VEGFA-226ENST00000611736 DDX60LQ5H9U9 1706 aaKnown RBP31.35■■■□□ 2.61
VEGFA-226ENST00000611736 ALDH1A1P00352 501 aa31.35■■■□□ 2.61
VEGFA-226ENST00000611736 ZFYP08048 801 aaPredicted RBP31.35■■■□□ 2.61
VEGFA-226ENST00000611736 PTPRAP18433 802 aa31.35■■■□□ 2.61
VEGFA-226ENST00000611736 RRP1BQ14684 758 aaKnown RBP31.35■■■□□ 2.61
VEGFA-226ENST00000611736 OTUD7BQ6GQQ9 843 aa31.35■■■□□ 2.61
VEGFA-226ENST00000611736 MCM9Q9NXL9 1143 aa31.35■■■□□ 2.61
VEGFA-226ENST00000611736 ATAD5Q96QE3 1844 aa31.34■■■□□ 2.61
VEGFA-226ENST00000611736 POLR3DP05423 398 aaPredicted RBP31.34■■■□□ 2.61
VEGFA-226ENST00000611736 CETPP11597 493 aa31.34■■■□□ 2.61
VEGFA-226ENST00000611736 METTL16Q86W50 562 aaKnown RBP31.34■■■□□ 2.61
VEGFA-226ENST00000611736 APPBP2Q92624 585 aa31.34■■■□□ 2.61
VEGFA-226ENST00000611736 DCP1AQ9NPI6 582 aaPredicted RBP31.34■■■□□ 2.61
VEGFA-226ENST00000611736 ZHX2Q9Y6X8 837 aa31.34■■■□□ 2.61
VEGFA-226ENST00000611736 LRRFIP1Q32MZ4 808 aaKnown RBP31.33■■■□□ 2.61
VEGFA-226ENST00000611736 TTC6Q86TZ1 520 aa31.33■■■□□ 2.61
VEGFA-226ENST00000611736 CCDC84Q86UT8 332 aaPredicted RBP31.33■■■□□ 2.61
VEGFA-226ENST00000611736 OSBP2Q969R2 916 aa31.33■■■□□ 2.61
VEGFA-226ENST00000611736 BAZ2AQ9UIF9 1905 aaKnown RBP31.32■■■□□ 2.6
VEGFA-226ENST00000611736 CAP2P40123 477 aa31.32■■■□□ 2.6
VEGFA-226ENST00000611736 R3HDMLQ9H3Y0 253 aa31.32■■■□□ 2.6
VEGFA-226ENST00000611736 KCNH4Q9UQ05 1017 aa31.32■■■□□ 2.6
VEGFA-226ENST00000611736 SLC4A4Q9Y6R1 1079 aa31.32■■■□□ 2.6
VEGFA-226ENST00000611736 PLCD1P51178 756 aa31.31■■■□□ 2.6
VEGFA-226ENST00000611736 ATP8A2Q9NTI2 1148 aa31.31■■■□□ 2.6
VEGFA-226ENST00000611736 SERPINB13Q9UIV8 391 aa31.31■■■□□ 2.6
VEGFA-226ENST00000611736 CAPN15O75808 1086 aa31.3■■■□□ 2.6
VEGFA-226ENST00000611736 FAM43AQ8N2R8 423 aa31.3■■■□□ 2.6
VEGFA-226ENST00000611736 EHD4Q9H223 541 aa31.3■■■□□ 2.6
VEGFA-226ENST00000611736 PHIPQ8WWQ0 1821 aa31.3■■■□□ 2.6
VEGFA-226ENST00000611736 GDF11O95390 407 aa31.29■■■□□ 2.6
VEGFA-226ENST00000611736 CYP2D6P10635 497 aa31.29■■■□□ 2.6
VEGFA-226ENST00000611736 EVX2Q03828 476 aa31.29■■■□□ 2.6
VEGFA-226ENST00000611736 PLEKHM2Q8IWE5 1019 aa31.29■■■□□ 2.6
VEGFA-226ENST00000611736 EVI5LQ96CN4 794 aa31.29■■■□□ 2.6
VEGFA-226ENST00000611736 STRBPQ96SI9 672 aaKnown RBP31.29■■■□□ 2.6
VEGFA-226ENST00000611736 AFG3L2Q9Y4W6 797 aa31.29■■■□□ 2.6
VEGFA-226ENST00000611736 BTBD19C9JJ37 291 aa31.28■■■□□ 2.6
VEGFA-226ENST00000611736 M0R2C6 588 aa31.28■■■□□ 2.6
VEGFA-226ENST00000611736 CFHR5Q9BXR6 569 aa31.28■■■□□ 2.6
VEGFA-226ENST00000611736 TRIM75PA6NK02 468 aa31.27■■■□□ 2.6
VEGFA-226ENST00000611736 CXCL11O14625 94 aa31.27■■■□□ 2.6
VEGFA-226ENST00000611736 CRHR2Q13324 411 aa31.27■■■□□ 2.6
VEGFA-226ENST00000611736 SHROOM1Q2M3G4 852 aaPredicted RBP31.27■■■□□ 2.6
VEGFA-226ENST00000611736 DDRGK1Q96HY6 314 aa31.27■■■□□ 2.6
VEGFA-226ENST00000611736 GPAA1O43292 621 aa31.26■■■□□ 2.59
VEGFA-226ENST00000611736 JAG1P78504 1218 aa31.26■■■□□ 2.59
VEGFA-226ENST00000611736 SEC62Q99442 399 aaKnown RBP31.26■■■□□ 2.59
VEGFA-226ENST00000611736 TRIM6-TRIM34B2RNG4 842 aa31.25■■■□□ 2.59
VEGFA-226ENST00000611736 GPR25O00155 361 aa31.25■■■□□ 2.59
VEGFA-226ENST00000611736 TAF1CQ15572 869 aaPredicted RBP31.25■■■□□ 2.59
VEGFA-226ENST00000611736 PTPRFP10586 1907 aa31.25■■■□□ 2.59
VEGFA-226ENST00000611736 CYP2D7A0A087X1C5 515 aa31.24■■■□□ 2.59
VEGFA-226ENST00000611736 A0A0G2JLL6 359 aaPredicted RBP31.24■■■□□ 2.59
VEGFA-226ENST00000611736 USP17L5A8MUK1 530 aa31.24■■■□□ 2.59
VEGFA-226ENST00000611736 ASNSP08243 561 aa31.24■■■□□ 2.59
VEGFA-226ENST00000611736 MOGSQ13724 837 aa31.24■■■□□ 2.59
VEGFA-226ENST00000611736 ZMYM1Q5SVZ6 1142 aa31.24■■■□□ 2.59
VEGFA-226ENST00000611736 TATDN1Q6P1N9 297 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms