RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 BPIFA3Q9BQP9 254 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 IFNKQ9P0W0 207 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 TNKSO95271 1327 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 SMTNL1A8MU46 457 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 DEXIO95424 95 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 TNNT1P13805 278 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 FAM84BQ96KN1 310 aaPredicted RBP18.38■□□□□ 0.53
TRIM46-211ENST00000611379 MAP7D2Q96T17 732 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 KCNH3Q9ULD8 1083 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 COL22A1Q8NFW1 1626 aaPredicted RBP18.38■□□□□ 0.53
TRIM46-211ENST00000611379 PRDM1O75626 825 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 KRI1Q8N9T8 703 aaKnown RBP18.38■□□□□ 0.53
TRIM46-211ENST00000611379 CNNM3Q8NE01 707 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 ARID3AQ99856 593 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 LMOD1P29536 600 aaPredicted RBP18.37■□□□□ 0.53
TRIM46-211ENST00000611379 GTF2F1P35269 517 aaKnown RBP eCLIP18.37■□□□□ 0.53
TRIM46-211ENST00000611379 AKAP17AQ02040 695 aaKnown RBP18.37■□□□□ 0.53
TRIM46-211ENST00000611379 NR5A1Q13285 461 aa18.37■□□□□ 0.53
TRIM46-211ENST00000611379 LONRF3Q496Y0 759 aa18.37■□□□□ 0.53
TRIM46-211ENST00000611379 TBC1D9BQ66K14 1250 aa18.37■□□□□ 0.53
TRIM46-211ENST00000611379 NBPF11Q86T75 865 aa18.37■□□□□ 0.53
TRIM46-211ENST00000611379 CCDC24Q8N4L8 307 aa18.37■□□□□ 0.53
TRIM46-211ENST00000611379 RIOK1Q9BRS2 568 aaKnown RBP18.37■□□□□ 0.53
TRIM46-211ENST00000611379 XPO4Q9C0E2 1151 aaKnown RBP18.37■□□□□ 0.53
TRIM46-211ENST00000611379 ARAP2Q8WZ64 1704 aa18.37■□□□□ 0.53
TRIM46-211ENST00000611379 MTA3Q9BTC8 594 aa18.37■□□□□ 0.53
TRIM46-211ENST00000611379 TOB1P50616 345 aaPredicted RBP18.36■□□□□ 0.53
TRIM46-211ENST00000611379 FOXP1Q9H334 677 aaPredicted RBP18.36■□□□□ 0.53
TRIM46-211ENST00000611379 TUBE1Q9UJT0 475 aa18.36■□□□□ 0.53
TRIM46-211ENST00000611379 KLRK1P26718 216 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 NCAPHQ15003 741 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 RILPL1Q5EBL4 403 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 OXER1Q8TDS5 423 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 ZNF592Q92610 1267 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 TFCP2L1Q9NZI6 479 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 ANAPC4Q9UJX5 808 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 COL4A1P02462 1669 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 hCG_1642624A0A1W2PR95 340 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 RPS8P62241 208 aaKnown RBP18.35■□□□□ 0.53
TRIM46-211ENST00000611379 SEC23AQ15436 765 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 KRBA2Q6ZNG9 492 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 PTF1AQ7RTS3 328 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 TMC6Q7Z403 805 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 ZSCAN10Q96SZ4 725 aaPredicted RBP18.35■□□□□ 0.53
TRIM46-211ENST00000611379 CABP5Q9NP86 173 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 SRP68Q9UHB9 627 aaKnown RBP18.35■□□□□ 0.53
TRIM46-211ENST00000611379 BCL9LQ86UU0 1499 aa18.35■□□□□ 0.53
TRIM46-211ENST00000611379 GSDMDP57764 484 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 GRIN1Q05586 938 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 IFIT1BQ5T764 474 aaKnown RBP18.34■□□□□ 0.53
TRIM46-211ENST00000611379 METTL16Q86W50 562 aaKnown RBP18.34■□□□□ 0.53
TRIM46-211ENST00000611379 ENAHQ8N8S7 591 aaPredicted RBP18.34■□□□□ 0.53
TRIM46-211ENST00000611379 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 SETDB2Q96T68 719 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 PCDHB6Q9Y5E3 794 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 NID2Q14112 1375 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 DOCK2Q92608 1830 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 WNK3Q9BYP7 1800 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 FAM237AA0A1B0GTK4 181 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 MTERF4Q7Z6M4 381 aaKnown RBP18.34■□□□□ 0.53
TRIM46-211ENST00000611379 NBPF5PQ86XG9 351 aaPredicted RBP18.34■□□□□ 0.53
TRIM46-211ENST00000611379 TRMT1Q9NXH9 659 aaKnown RBP18.34■□□□□ 0.53
TRIM46-211ENST00000611379 USP27XA6NNY8 438 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 USP17L12C9JPN9 530 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 USP17L21D6R901 530 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 CCZ1BP86790 482 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 CCZ1P86791 482 aaPredicted RBP18.34■□□□□ 0.53
TRIM46-211ENST00000611379 OLFM4Q6UX06 510 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 CATIPQ7Z7H3 387 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 IQCA1Q86XH1 822 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 PCDHA5Q9Y5H7 936 aa18.34■□□□□ 0.53
TRIM46-211ENST00000611379 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.53
TRIM46-211ENST00000611379 ATP1A3P13637 1013 aa18.33■□□□□ 0.53
TRIM46-211ENST00000611379 RCAN1P53805 252 aa18.33■□□□□ 0.53
TRIM46-211ENST00000611379 GLIPR1L2Q4G1C9 344 aa18.33■□□□□ 0.53
TRIM46-211ENST00000611379 BCL2L12Q9HB09 334 aa18.33■□□□□ 0.53
TRIM46-211ENST00000611379 VPS54Q9P1Q0 977 aa18.33■□□□□ 0.53
TRIM46-211ENST00000611379 FOXN1O15353 648 aa18.33■□□□□ 0.52
TRIM46-211ENST00000611379 FANCCQ00597 558 aa18.33■□□□□ 0.52
TRIM46-211ENST00000611379 FOXP4Q8IVH2 680 aaPredicted RBP18.33■□□□□ 0.52
TRIM46-211ENST00000611379 BRIP1Q9BX63 1249 aa18.33■□□□□ 0.52
TRIM46-211ENST00000611379 IMPACTQ9P2X3 320 aa18.33■□□□□ 0.52
TRIM46-211ENST00000611379 IKBKBO14920 756 aa18.32■□□□□ 0.52
TRIM46-211ENST00000611379 XBP1P17861 261 aa18.32■□□□□ 0.52
TRIM46-211ENST00000611379 RNF26Q9BY78 433 aaPredicted RBP18.32■□□□□ 0.52
TRIM46-211ENST00000611379 JAG2Q9Y219 1238 aa18.32■□□□□ 0.52
TRIM46-211ENST00000611379 V9GY48 417 aaPredicted RBP18.32■□□□□ 0.52
TRIM46-211ENST00000611379 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
TRIM46-211ENST00000611379 PTPREP23469 700 aa18.32■□□□□ 0.52
TRIM46-211ENST00000611379 SLC10A5Q5PT55 438 aa18.32■□□□□ 0.52
TRIM46-211ENST00000611379 CTR9Q6PD62 1173 aa18.32■□□□□ 0.52
TRIM46-211ENST00000611379 FBXO33Q7Z6M2 555 aa18.32■□□□□ 0.52
TRIM46-211ENST00000611379 PDILTQ8N807 584 aa18.32■□□□□ 0.52
TRIM46-211ENST00000611379 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
TRIM46-211ENST00000611379 OSBPL5Q9H0X9 879 aaPredicted RBP18.32■□□□□ 0.52
TRIM46-211ENST00000611379 AATFQ9NY61 560 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRIM46-211ENST00000611379 FBXO2Q9UK22 296 aaPredicted RBP18.32■□□□□ 0.52
TRIM46-211ENST00000611379 NPHP1O15259 732 aa18.31■□□□□ 0.52
TRIM46-211ENST00000611379 POLR2DO15514 142 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms