RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CRNKL1Q9BZJ0 848 aaKnown RBP15.79■□□□□ 0.12
NEK3-205ENST00000610828 GUCY1A2P33402 732 aa15.79■□□□□ 0.12
NEK3-205ENST00000610828 DZIP1Q86YF9 867 aaKnown RBP15.79■□□□□ 0.12
NEK3-205ENST00000610828 FMR1NBQ8N0W7 255 aaPredicted RBP15.79■□□□□ 0.12
NEK3-205ENST00000610828 QTRT2Q9H974 415 aaKnown RBP15.79■□□□□ 0.12
NEK3-205ENST00000610828 DUOX1Q9NRD9 1551 aa15.78■□□□□ 0.12
NEK3-205ENST00000610828 MYH2Q9UKX2 1941 aa15.78■□□□□ 0.12
NEK3-205ENST00000610828 NDUFA8P51970 172 aa15.78■□□□□ 0.12
NEK3-205ENST00000610828 SEC23AQ15436 765 aa15.78■□□□□ 0.12
NEK3-205ENST00000610828 RPGRQ92834 1020 aaKnown RBP15.78■□□□□ 0.12
NEK3-205ENST00000610828 ZSCAN10Q96SZ4 725 aaPredicted RBP15.78■□□□□ 0.12
NEK3-205ENST00000610828 DCP1AQ9NPI6 582 aaPredicted RBP15.78■□□□□ 0.12
NEK3-205ENST00000610828 IRS2Q9Y4H2 1338 aa15.78■□□□□ 0.12
NEK3-205ENST00000610828 U2AF2P26368 475 aaKnown RBP eCLIP15.78■□□□□ 0.122e-7■■□□□ 13
NEK3-205ENST00000610828 MARCKSP29966 332 aaPredicted RBP15.78■□□□□ 0.12
NEK3-205ENST00000610828 IQCA1Q86XH1 822 aa15.78■□□□□ 0.12
NEK3-205ENST00000610828 ENAHQ8N8S7 591 aaPredicted RBP15.78■□□□□ 0.12
NEK3-205ENST00000610828 LEMD3Q9Y2U8 911 aa15.78■□□□□ 0.12
NEK3-205ENST00000610828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.78■□□□□ 0.12
NEK3-205ENST00000610828 XDHP47989 1333 aa15.78■□□□□ 0.12
NEK3-205ENST00000610828 GYS1P13807 737 aa15.77■□□□□ 0.12
NEK3-205ENST00000610828 RCAN1P53805 252 aa15.77■□□□□ 0.12
NEK3-205ENST00000610828 EVX2Q03828 476 aa15.77■□□□□ 0.12
NEK3-205ENST00000610828 SLC39A14Q15043 492 aa15.77■□□□□ 0.12
NEK3-205ENST00000610828 IFIT1BQ5T764 474 aaKnown RBP15.77■□□□□ 0.12
NEK3-205ENST00000610828 SPTY2D1Q68D10 685 aaPredicted RBP15.77■□□□□ 0.12
NEK3-205ENST00000610828 CRACR2BQ8N4Y2 399 aaPredicted RBP15.77■□□□□ 0.12
NEK3-205ENST00000610828 SDF4Q9BRK5 362 aa15.77■□□□□ 0.12
NEK3-205ENST00000610828 CCDC88AQ3V6T2 1871 aa15.77■□□□□ 0.12
NEK3-205ENST00000610828 ZNF500O60304 480 aaPredicted RBP15.77■□□□□ 0.11
NEK3-205ENST00000610828 NBPF11Q86T75 865 aa15.77■□□□□ 0.11
NEK3-205ENST00000610828 ERCC4Q92889 916 aaPredicted RBP15.77■□□□□ 0.11
NEK3-205ENST00000610828 GPR101Q96P66 508 aaPredicted RBP15.77■□□□□ 0.11
NEK3-205ENST00000610828 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.77■□□□□ 0.11
NEK3-205ENST00000610828 ATP8A2Q9NTI2 1148 aa15.77■□□□□ 0.11
NEK3-205ENST00000610828 DEXIO95424 95 aa15.76■□□□□ 0.11
NEK3-205ENST00000610828 PCP11498 1178 aaKnown RBP15.76■□□□□ 0.11
NEK3-205ENST00000610828 ST5P78524 1137 aa15.76■□□□□ 0.11
NEK3-205ENST00000610828 SAFBQ15424 915 aaKnown RBP eCLIP15.76■□□□□ 0.11
NEK3-205ENST00000610828 STX1AQ16623 288 aa15.76■□□□□ 0.11
NEK3-205ENST00000610828 KCNJ14Q9UNX9 436 aa15.76■□□□□ 0.11
NEK3-205ENST00000610828 UBR3Q6ZT12 1888 aa15.76■□□□□ 0.11
NEK3-205ENST00000610828 CAVIN2O95810 425 aa15.76■□□□□ 0.11
NEK3-205ENST00000610828 MMP1P03956 469 aa15.76■□□□□ 0.11
NEK3-205ENST00000610828 SERPINB2P05120 415 aa15.76■□□□□ 0.11
NEK3-205ENST00000610828 LDHBP07195 334 aaKnown RBP15.76■□□□□ 0.11
NEK3-205ENST00000610828 FGRP09769 529 aa15.76■□□□□ 0.11
NEK3-205ENST00000610828 AXDND1Q5T1B0 1012 aaPredicted RBP15.76■□□□□ 0.11
NEK3-205ENST00000610828 ZNF830Q96NB3 372 aaPredicted RBP15.76■□□□□ 0.11
NEK3-205ENST00000610828 MAST2Q6P0Q8 1798 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 BTBD18B2RXH4 712 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 WDHD1O75717 1129 aaPredicted RBP15.75■□□□□ 0.11
NEK3-205ENST00000610828 TRIM37O94972 964 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 SLC4A8Q2Y0W8 1093 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 ZNF804AQ7Z570 1209 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 CATIPQ7Z7H3 387 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 NOSTRINQ8IVI9 506 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 DIS3L2Q8IYB7 885 aaKnown RBP15.75■□□□□ 0.11
NEK3-205ENST00000610828 WDR66Q8TBY9 1149 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 NAP1L5Q96NT1 182 aaPredicted RBP15.75■□□□□ 0.11
NEK3-205ENST00000610828 ARPP21Q9UBL0 812 aaPredicted RBP15.75■□□□□ 0.11
NEK3-205ENST00000610828 A0A087WWV3 80 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 SLC27A3Q5K4L6 730 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 C11orf57Q6ZUT1 292 aaPredicted RBP15.75■□□□□ 0.11
NEK3-205ENST00000610828 SPC24Q8NBT2 197 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 TDRD7Q8NHU6 1098 aaKnown RBP15.75■□□□□ 0.11
NEK3-205ENST00000610828 MAP3K14Q99558 947 aa15.75■□□□□ 0.11
NEK3-205ENST00000610828 PPP6R2O75170 966 aa15.74■□□□□ 0.11
NEK3-205ENST00000610828 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
NEK3-205ENST00000610828 CYP2D6P10635 497 aa15.74■□□□□ 0.11
NEK3-205ENST00000610828 PFKFB1P16118 471 aa15.74■□□□□ 0.11
NEK3-205ENST00000610828 CMA1P23946 247 aa15.74■□□□□ 0.11
NEK3-205ENST00000610828 AKAP17AQ02040 695 aaKnown RBP15.74■□□□□ 0.11
NEK3-205ENST00000610828 PPP2R5BQ15173 497 aa15.74■□□□□ 0.11
NEK3-205ENST00000610828 TMED8Q6PL24 325 aaPredicted RBP15.74■□□□□ 0.11
NEK3-205ENST00000610828 JMYQ8N9B5 988 aa15.74■□□□□ 0.11
NEK3-205ENST00000610828 TTC12Q9H892 705 aaPredicted RBP15.74■□□□□ 0.11
NEK3-205ENST00000610828 MROH7-TTC4A0A0A0MT08 1334 aa15.74■□□□□ 0.11
NEK3-205ENST00000610828 ZNF202O95125 648 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 GPSM2P81274 684 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 PTPAQ15257 358 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 CRY2Q49AN0 593 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 FAM47AQ5JRC9 791 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 KRT27Q7Z3Y8 459 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 ANO10Q9NW15 660 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 MCM9Q9NXL9 1143 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
NEK3-205ENST00000610828 UFL1O94874 794 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 FBXW7Q969H0 707 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 RNF26Q9BY78 433 aaPredicted RBP15.73■□□□□ 0.11
NEK3-205ENST00000610828 TRIM5Q9C035 493 aa15.73■□□□□ 0.11
NEK3-205ENST00000610828 GOLGA6L19H0YKK7 550 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 ORC4O43929 436 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 NMT2O60551 498 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 USP17L8P0C7I0 530 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 PDE4BQ07343 736 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 DIXDC1Q155Q3 683 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 RBM17Q96I25 401 aaKnown RBP15.72■□□□□ 0.11
NEK3-205ENST00000610828 ZBTB22O15209 634 aa15.72■□□□□ 0.11
NEK3-205ENST00000610828 USP5P45974 858 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms