RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 RAD18Q9NS91 495 aa7.16□□□□□ -1.26
SMCHD1-213ENST00000609587 PPP1R9AQ9ULJ8 1098 aa7.16□□□□□ -1.26
SMCHD1-213ENST00000609587 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.15□□□□□ -1.26
SMCHD1-213ENST00000609587 SORBS3O60504 671 aa7.15□□□□□ -1.26
SMCHD1-213ENST00000609587 RANGAP1P46060 587 aaPredicted RBP7.15□□□□□ -1.26
SMCHD1-213ENST00000609587 DTHD1Q6ZMT9 781 aa7.15□□□□□ -1.26
SMCHD1-213ENST00000609587 LRRC56Q8IYG6 542 aaPredicted RBP7.15□□□□□ -1.26
SMCHD1-213ENST00000609587 VTI1BQ9UEU0 232 aa7.15□□□□□ -1.26
SMCHD1-213ENST00000609587 AOC2O75106 756 aa7.14□□□□□ -1.27
SMCHD1-213ENST00000609587 EIF4BP23588 611 aaKnown RBP7.14□□□□□ -1.27
SMCHD1-213ENST00000609587 VAMP1P23763 118 aa7.14□□□□□ -1.27
SMCHD1-213ENST00000609587 RAP1GAPP47736 663 aa7.14□□□□□ -1.27
SMCHD1-213ENST00000609587 FCGRTP55899 365 aa7.14□□□□□ -1.27
SMCHD1-213ENST00000609587 MLANAQ16655 118 aa7.14□□□□□ -1.27
SMCHD1-213ENST00000609587 IFI16Q16666 785 aaKnown RBP7.14□□□□□ -1.27
SMCHD1-213ENST00000609587 CORO1BQ9BR76 489 aa7.14□□□□□ -1.27
SMCHD1-213ENST00000609587 LMCD1Q9NZU5 365 aa7.14□□□□□ -1.27
SMCHD1-213ENST00000609587 AK5Q9Y6K8 562 aa7.14□□□□□ -1.27
SMCHD1-213ENST00000609587 CEACAM5P06731 702 aa7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 BUD31P41223 144 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 FAAP100Q0VG06 881 aa7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 MRPL58Q14197 206 aaKnown RBP7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 AOC3Q16853 763 aa7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 ANGEL2Q5VTE6 544 aaKnown RBP7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 HRASLS5Q96KN8 279 aa7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 OSBPL7Q9BZF2 842 aa7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 C12orf49Q9H741 205 aa7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 PRDM7Q9NQW5 492 aa7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 PLAGL2Q9UPG8 496 aa7.13□□□□□ -1.27
SMCHD1-213ENST00000609587 B8ZZF3 427 aa7.12□□□□□ -1.27
SMCHD1-213ENST00000609587 TMPRSS2O15393 492 aa7.12□□□□□ -1.27
SMCHD1-213ENST00000609587 GSTT1P30711 240 aa7.12□□□□□ -1.27
SMCHD1-213ENST00000609587 AP3B2Q13367 1082 aa7.12□□□□□ -1.27
SMCHD1-213ENST00000609587 TSNAXIP1Q2TAA8 658 aa7.12□□□□□ -1.27
SMCHD1-213ENST00000609587 SLC23A3Q6PIS1 610 aa7.12□□□□□ -1.27
SMCHD1-213ENST00000609587 C3orf58Q8NDZ4 430 aa7.12□□□□□ -1.27
SMCHD1-213ENST00000609587 LEFTY1O75610 366 aa7.11□□□□□ -1.27
SMCHD1-213ENST00000609587 OXCT1P55809 520 aa7.11□□□□□ -1.27
SMCHD1-213ENST00000609587 KCNMB1Q16558 191 aa7.11□□□□□ -1.27
SMCHD1-213ENST00000609587 ANKRD24Q8TF21 1146 aa7.11□□□□□ -1.27
SMCHD1-213ENST00000609587 LIN37Q96GY3 246 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-213ENST00000609587 MKNK2Q9HBH9 465 aa7.11□□□□□ -1.27
SMCHD1-213ENST00000609587 TMEM39AQ9NV64 488 aa7.11□□□□□ -1.27
SMCHD1-213ENST00000609587 SYNGAP1Q96PV0 1343 aa7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 RECKO95980 971 aa7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 ZSCAN22P10073 491 aaPredicted RBP7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 PPP2R3AQ06190 1150 aa7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 PDE3AQ14432 1141 aa7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 TTLL10Q6ZVT0 673 aa7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 ZSCAN18Q8TBC5 510 aaPredicted RBP7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 BACH2Q9BYV9 841 aa7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 FAM53CQ9NYF3 392 aa7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 FAM8A1Q9UBU6 413 aa7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 PPM1HQ9ULR3 514 aa7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 AKAP2Q9Y2D5 859 aa7.1□□□□□ -1.27
SMCHD1-213ENST00000609587 USP17L7P0C7H9 530 aa7.09□□□□□ -1.27
SMCHD1-213ENST00000609587 CRELD1Q96HD1 420 aa7.09□□□□□ -1.27
SMCHD1-213ENST00000609587 PPP1R16BQ96T49 567 aa7.09□□□□□ -1.27
SMCHD1-213ENST00000609587 KRT1P04264 644 aa7.08□□□□□ -1.28
SMCHD1-213ENST00000609587 ITIH2P19823 946 aa7.08□□□□□ -1.28
SMCHD1-213ENST00000609587 ZNF157P51786 506 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-213ENST00000609587 SIAH1Q8IUQ4 282 aa7.08□□□□□ -1.28
SMCHD1-213ENST00000609587 TMEM87AQ8NBN3 555 aa7.08□□□□□ -1.28
SMCHD1-213ENST00000609587 WDR89Q96FK6 387 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-213ENST00000609587 DUSP23Q9BVJ7 150 aa7.08□□□□□ -1.28
SMCHD1-213ENST00000609587 CEP44Q9C0F1 390 aa7.08□□□□□ -1.28
SMCHD1-213ENST00000609587 TNKS2Q9H2K2 1166 aa7.08□□□□□ -1.28
SMCHD1-213ENST00000609587 TMEM265A0A087WTH1 108 aa7.07□□□□□ -1.28
SMCHD1-213ENST00000609587 CTSHP09668 335 aa7.07□□□□□ -1.28
SMCHD1-213ENST00000609587 FYB2Q5VWT5 728 aa7.07□□□□□ -1.28
SMCHD1-213ENST00000609587 NECAB3Q96P71 396 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-213ENST00000609587 FANCD2OSQ96PS1 177 aa7.07□□□□□ -1.28
SMCHD1-213ENST00000609587 PIDD1Q9HB75 910 aa7.07□□□□□ -1.28
SMCHD1-213ENST00000609587 GPN3Q9UHW5 284 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-213ENST00000609587 CTNND2Q9UQB3 1225 aa7.07□□□□□ -1.28
SMCHD1-213ENST00000609587 SYDE1Q6ZW31 735 aaPredicted RBP7.06□□□□□ -1.28
SMCHD1-213ENST00000609587 PDZD3Q86UT5 571 aa7.06□□□□□ -1.28
SMCHD1-213ENST00000609587 SMYD4Q8IYR2 804 aaPredicted RBP7.06□□□□□ -1.28
SMCHD1-213ENST00000609587 ATXN3LQ9H3M9 355 aa7.06□□□□□ -1.28
SMCHD1-213ENST00000609587 CCDC86Q9H6F5 360 aaKnown RBP7.06□□□□□ -1.28
SMCHD1-213ENST00000609587 RAPGEFL1Q9UHV5 662 aa7.06□□□□□ -1.28
SMCHD1-213ENST00000609587 PCDHGC5Q9Y5F6 944 aa7.06□□□□□ -1.28
SMCHD1-213ENST00000609587 SCAMP3O14828 347 aaKnown RBP7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 GSTP1P09211 210 aaKnown RBP7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 TCF3P15923 654 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 LIG1P18858 919 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 NME2P22392 152 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 ARNTP27540 789 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 LDLRAD1Q5T700 205 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 PRR23BQ6ZRT6 265 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 ARHGAP27Q6ZUM4 889 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 ANKLE2Q86XL3 938 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 SULF2Q8IWU5 870 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 DISC1Q9NRI5 854 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 KRT82Q9NSB4 513 aa7.05□□□□□ -1.28
SMCHD1-213ENST00000609587 ENC1O14682 589 aa7.04□□□□□ -1.28
SMCHD1-213ENST00000609587 C1QTNF9P0C862 333 aa7.04□□□□□ -1.28
SMCHD1-213ENST00000609587 HNRNPUQ00839 825 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMCHD1-213ENST00000609587 ID3Q02535 119 aa7.04□□□□□ -1.28
SMCHD1-213ENST00000609587 TAF1CQ15572 869 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms